BLASTX nr result

ID: Cimicifuga21_contig00018499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018499
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318360.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-15
emb|CBI22570.3| unnamed protein product [Vitis vinifera]               78   8e-13
ref|XP_002266751.1| PREDICTED: uncharacterized protein LOC100243...    78   8e-13
emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]    77   1e-12
ref|NP_200107.2| uncharacterized protein [Arabidopsis thaliana] ...    73   3e-11

>ref|XP_002318360.1| predicted protein [Populus trichocarpa] gi|222859033|gb|EEE96580.1|
           predicted protein [Populus trichocarpa]
          Length = 997

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
 Frame = +2

Query: 2   LIILFSPVSRSLQCLSNFLDTDLDEELVGNDEDVYCKNLVHIFNPVNEGLVSRDIHCSWI 181
           L+ILFSP+ RS + +S F + +L++  +  D  ++ +    +F  V+EG  S+DIH  W+
Sbjct: 153 LVILFSPILRSFKFVSEFFNVELNDGCL-RDGSLFHEKFCGVFESVSEGFASKDIHFVWV 211

Query: 182 DVNCEEETVVKDQSLVVFE---RGIKNIGWGFCSTD 280
           DV CE   V  D+S VVFE   RGIK +GWGFCS+D
Sbjct: 212 DVRCEVGCVGVDESEVVFEFFRRGIKGLGWGFCSSD 247


>emb|CBI22570.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 10/103 (9%)
 Frame = +2

Query: 2   LIILFSPVSRSLQCLSNFLDTDLDEELVGNDEDVYCKNLVHIFNPVNEGLVSRDIHCSWI 181
           LI+LFSP+ RSL+ +S F+  ++++EL+ N  D + +     F+  N+  VSRDIH +W+
Sbjct: 156 LIVLFSPIYRSLKWVSEFVSVEVEDELLTN-VDAFSRKFCGFFDSANDAFVSRDIHFTWV 214

Query: 182 DVN----CEE------ETVVKDQSLVVFERGIKNIGWGFCSTD 280
           DV     C E      E+   +  +  F+ GIKN+GWGF STD
Sbjct: 215 DVRHRLACGEGKGETNESNEPELDIGFFKHGIKNLGWGFSSTD 257


>ref|XP_002266751.1| PREDICTED: uncharacterized protein LOC100243267 [Vitis vinifera]
          Length = 1018

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 10/103 (9%)
 Frame = +2

Query: 2   LIILFSPVSRSLQCLSNFLDTDLDEELVGNDEDVYCKNLVHIFNPVNEGLVSRDIHCSWI 181
           LI+LFSP+ RSL+ +S F+  ++++EL+ N  D + +     F+  N+  VSRDIH +W+
Sbjct: 156 LIVLFSPIYRSLKWVSEFVSVEVEDELLTN-VDAFSRKFCGFFDSANDAFVSRDIHFTWV 214

Query: 182 DVN----CEE------ETVVKDQSLVVFERGIKNIGWGFCSTD 280
           DV     C E      E+   +  +  F+ GIKN+GWGF STD
Sbjct: 215 DVRHRLACGEGKGETNESNEPELDIGFFKHGIKNLGWGFSSTD 257


>emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 10/103 (9%)
 Frame = +2

Query: 2   LIILFSPVSRSLQCLSNFLDTDLDEELVGNDEDVYCKNLVHIFNPVNEGLVSRDIHCSWI 181
           LI+LFSP+ RSL+ +S F+  ++++EL+ N  D + +     F   N+  VSRDIH +W+
Sbjct: 156 LIVLFSPIYRSLKWVSEFVSVEVEDELLTN-VDAFSRKFCGFFXSANDAFVSRDIHFTWV 214

Query: 182 DVN----CEE------ETVVKDQSLVVFERGIKNIGWGFCSTD 280
           DV     C E      E+   +  +  F+ GIKN+GWGF STD
Sbjct: 215 DVRHRLACGEGKGETNESNEPELDIGFFKHGIKNLGWGFSSTD 257


>ref|NP_200107.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332008898|gb|AED96281.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 948

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/93 (41%), Positives = 52/93 (55%)
 Frame = +2

Query: 2   LIILFSPVSRSLQCLSNFLDTDLDEELVGNDEDVYCKNLVHIFNPVNEGLVSRDIHCSWI 181
           L+++FSP+SR L  +S FLD    +E   +D D++   L  IF  VNE    RDI  SWI
Sbjct: 162 LVVMFSPISRDLDWVSEFLDVKSGDECF-SDLDLFKSKLREIFYCVNELFDDRDIQLSWI 220

Query: 182 DVNCEEETVVKDQSLVVFERGIKNIGWGFCSTD 280
           DV   +E          F+ GI+ +GWG CSTD
Sbjct: 221 DVKSGDERCELGLKSGFFDSGIRELGWGHCSTD 253


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