BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018491
         (1380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28022.3| unnamed protein product [Vitis vinifera]              385   e-104
ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chlorop...   382   e-104
ref|XP_002535109.1| conserved hypothetical protein [Ricinus comm...   380   e-103
ref|XP_002332503.1| predicted protein [Populus trichocarpa] gi|2...   379   e-102
ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chlorop...   376   e-102

>emb|CBI28022.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  385 bits (988), Expect = e-104
 Identities = 232/484 (47%), Positives = 277/484 (57%), Gaps = 31/484 (6%)
 Frame = +2

Query: 5    LTEEEIKDLIQGCLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV 184
            LTEEEIK+L+QGC+K++RQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV
Sbjct: 244  LTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV 303

Query: 185  RQQLEEKTGGKIIYSRGGVXXXXXXXXXXXXXXXXXXXMLWKPVSPVYPRLVLQVPEGLT 364
            RQQLEEKTGGK+IY +GGV                   MLWKPV+PVYPRLV + PEGLT
Sbjct: 304  RQQLEEKTGGKVIYGKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLT 363

Query: 365  LEEATEMRKRGRNLQPICKLGKNGVYSGLVKHVREAFEECELVRICCEGMNGSDYKKIGA 544
            LEEA  MRK+GR L PICKL KNGVY+ LV +VREAFEECELVRI C+G+N SDY+KIGA
Sbjct: 364  LEEAGAMRKKGRKLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGA 423

Query: 545  KLKDLVPCVLISFEYEHILMWRGQDWKFSLPKSEEFAKDG--------VIVNPPNGADSS 700
            KLKDLVPCVLISFE+EHILMWRG DWKF  PK E+  K+           + PP      
Sbjct: 424  KLKDLVPCVLISFEHEHILMWRGSDWKFLHPKPEDGCKEAKESDNNSEASIPPPFEGQEL 483

Query: 701  SVEHEEALQLLGQNSSDDDTILEP--NASWSSSDTDETLXXXXXXXXXXXESVTVDKCVT 874
            S      + +   +    DTI  P  N   +   T++                  DK   
Sbjct: 484  SASCSSKISVKDTSLDMLDTIASPVINEDVAMDKTEDLSSKGNDILSFEGN----DKPFA 539

Query: 875  THDMVQSP---DDESDISSTSPEHSIGLVPAPDGVIIRDDLSKTATWSST---------- 1015
               +V++    D  SD +  + E  I L    +     D+ +       T          
Sbjct: 540  ATQLVKTAYNWDTVSDDTGGTNESEIILTKLDNAHHADDESAAMPVELDTMLENGSIKND 599

Query: 1016 --CTEGVTLLQKKAVEXXXXXXXXXXXXXXXIVHERSVAFAKSAPPGPVYXXXXXXXXXX 1189
              CT G+ LL K+AV+               IV+ ++VAF+K APPGPV+          
Sbjct: 600  APCTGGLLLLLKQAVDSGSAVVLDGDSCDADIVYGKTVAFSKDAPPGPVF-RRPRKAAVQ 658

Query: 1190 XXXXXENSDLKEIEFMTVTE-DIVKKKSFRNQRLKDFKE-----VYPDTLPYGSLGVDEL 1351
                 E  DL   + +T  E    + KS RNQ  KDFKE      YP     G+LGVDEL
Sbjct: 659  KCEKEEPRDLVVGKIVTAPEKGRSQSKSSRNQIAKDFKEGYLDVDYPGVGTRGTLGVDEL 718

Query: 1352 AKLL 1363
            AKLL
Sbjct: 719  AKLL 722


>ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
          Length = 752

 Score =  382 bits (982), Expect = e-104
 Identities = 236/509 (46%), Positives = 290/509 (56%), Gaps = 56/509 (11%)
 Frame = +2

Query: 5    LTEEEIKDLIQGCLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV 184
            LTEEEIK+L+QGC+K++RQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV
Sbjct: 244  LTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV 303

Query: 185  RQQLEEKTGGKIIYSRGGVXXXXXXXXXXXXXXXXXXXMLWKPVSPVYPRLVLQVPEGLT 364
            RQQLEEKTGGK+IY +GGV                   MLWKPV+PVYPRLV + PEGLT
Sbjct: 304  RQQLEEKTGGKVIYGKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLT 363

Query: 365  LEEATEMRKRGRNLQPICKLGKNGVYSGLVKHVREAFEECELVRICCEGMNGSDYKKIGA 544
            LEEA  MRK+GR L PICKL KNGVY+ LV +VREAFEECELVRI C+G+N SDY+KIGA
Sbjct: 364  LEEAGAMRKKGRKLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGA 423

Query: 545  KLKDLVPCVLISFEYEHILMWRGQDWKFSLPKSEEFAKDG--------VIVNPP------ 682
            KLKDLVPCVLISFE+EHILMWRG DWKF  PK E+  K+           + PP      
Sbjct: 424  KLKDLVPCVLISFEHEHILMWRGSDWKFLHPKPEDGCKEAKESDNNSEASIPPPFEGQEL 483

Query: 683  NGADSSSVE-HEEALQLLGQNSS---DDDTILEPNASWSSSDTD---------------- 802
            + + SS +   + +L +L   +S   ++D  ++     SS   D                
Sbjct: 484  SASCSSKISVKDTSLDMLDTIASPVINEDVAMDKTEDLSSKGNDILSFEGNDKPFAATQL 543

Query: 803  -ETLXXXXXXXXXXXESVTVDKCVTTHDMVQSPDDESD---------ISSTSPEHSIGLV 952
             +T             +   +  +T  D     DDES          + + S ++ +   
Sbjct: 544  VKTAYNWDTVSDDTGGTNESEIILTKLDNAHHADDESAAMPVELDTMLENGSIKNELMDA 603

Query: 953  PAPDGVIIRD------DLSKTATWSSTCTEGVTLLQKKAVEXXXXXXXXXXXXXXXIVHE 1114
               D   ++D      D  K    S+ CT G+ LL K+AV+               IV+ 
Sbjct: 604  VTHDMDKLQDIPKASQDCGKMTGSSAPCTGGLLLLLKQAVDSGSAVVLDGDSCDADIVYG 663

Query: 1115 RSVAFAKSAPPGPVYXXXXXXXXXXXXXXXENSDLKEIEFMTVTE-DIVKKKSFRNQRLK 1291
            ++VAF+K APPGPV+               E  DL   + +T  E    + KS RNQ  K
Sbjct: 664  KTVAFSKDAPPGPVF-RRPRKAAVQKCEKEEPRDLVVGKIVTAPEKGRSQSKSSRNQIAK 722

Query: 1292 DFKE-----VYPDTLPYGSLGVDELAKLL 1363
            DFKE      YP     G+LGVDELAKLL
Sbjct: 723  DFKEGYLDVDYPGVGTRGTLGVDELAKLL 751


>ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
            gi|223524018|gb|EEF27274.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 748

 Score =  380 bits (976), Expect = e-103
 Identities = 233/494 (47%), Positives = 291/494 (58%), Gaps = 41/494 (8%)
 Frame = +2

Query: 5    LTEEEIKDLIQGCLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV 184
            LT EE+K LI+GCLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKC GVCTVDMDNV
Sbjct: 252  LTTEEVKILIEGCLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCMGVCTVDMDNV 311

Query: 185  RQQLEEKTGGKIIYSRGGVXXXXXXXXXXXXXXXXXXXMLWKPVSPVYPRLVLQVPEGLT 364
             QQLEE+TGGK+IY +GGV                   MLWKPV+PVYPRL+ + PEGLT
Sbjct: 312  CQQLEERTGGKVIYRKGGVVYLFRGRNYNYRTRPRFPLMLWKPVTPVYPRLIKRAPEGLT 371

Query: 365  LEEATEMRKRGRNLQPICKLGKNGVYSGLVKHVREAFEECELVRICCEGMNGSDYKKIGA 544
            LEEA+EMR++GR L PICKL KNGVY  LVK VREAFEECELVRI C+G+NGSDY+K+GA
Sbjct: 372  LEEASEMRRKGRKLIPICKLAKNGVYCNLVKEVREAFEECELVRIDCQGVNGSDYRKVGA 431

Query: 545  KLKDLVPCVLISFEYEHILMWRGQDWKFSL--PKSEEFAKDGVIVNPPNGADS------- 697
            KLK+LVPC+LISFE+EHILMWRG+DWK S+  P ++     G  VN      S       
Sbjct: 432  KLKELVPCLLISFEHEHILMWRGRDWKSSMIKPVNDSVEAIGSDVNSATSIASVLEDQIM 491

Query: 698  SSVEHEEALQLLGQNS----SDDDTILEPN-------ASWSSSDTDE----TLXXXXXXX 832
              V HE+ L     ++    S D+    P+       A  +SS T E             
Sbjct: 492  EIVSHEDGLSKPDMSTIPVGSMDEQAEHPSILDGTSVAIGASSTTVEMSEINPMTESGSS 551

Query: 833  XXXXESVTVDKCVTTHDMVQSPDDESD------ISSTSPEHSIGLVPAPDGVIIR--DDL 988
                ES  ++  V +  +V + D  ++      +SS +   S+G       V I   DD+
Sbjct: 552  SAVSESEVINNAVGSESVVNNMDPANEMPVAMSVSSETVLESVGSKKELHDVSIECSDDV 611

Query: 989  SKTATWSSTCTEGVTLLQKKAVEXXXXXXXXXXXXXXXIVHERSVAFAKSAPPGPVYXXX 1168
            +K A  S +  + V LL K+AVE               IV++R+VAFAKSAPPGPV+   
Sbjct: 612  NKPANLSVSYADRVLLLWKQAVESGSALILVDADLDADIVYQRAVAFAKSAPPGPVFRHR 671

Query: 1169 XXXXXXXXXXXXENSDLKEIEFM-------TVTEDI-VKKKSFRNQRLKDFKEVYP-DTL 1321
                        E+ D +  EF+        V++ +  + KS + QR K  +E    ++ 
Sbjct: 672  SKKASIRKSEKQESKDSEPKEFLNLEYLETNVSQTMGSENKSSKPQRKKKSREQQNLNSA 731

Query: 1322 PYGSLGVDELAKLL 1363
              G LGVDELAKLL
Sbjct: 732  RLGRLGVDELAKLL 745


>ref|XP_002332503.1| predicted protein [Populus trichocarpa] gi|222832483|gb|EEE70960.1|
            predicted protein [Populus trichocarpa]
          Length = 699

 Score =  379 bits (973), Expect = e-102
 Identities = 222/463 (47%), Positives = 280/463 (60%), Gaps = 10/463 (2%)
 Frame = +2

Query: 5    LTEEEIKDLIQGCLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV 184
            LT+EEI++L+ GCLK +RQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV
Sbjct: 248  LTQEEIQELVDGCLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV 307

Query: 185  RQQLEEKTGGKIIYSRGGVXXXXXXXXXXXXXXXXXXXMLWKPVSPVYPRLVLQVPEGLT 364
             QQLEE+TGGKIIY +GGV                   MLWKPV+PVYPRL+ + PEGLT
Sbjct: 308  CQQLEERTGGKIIYRKGGVLYLFRGRNYNYRFRPRFPLMLWKPVTPVYPRLIQRAPEGLT 367

Query: 365  LEEATEMRKRGRNLQPICKLGKNGVYSGLVKHVREAFEECELVRICCEGMNGSDYKKIGA 544
            L+EA+ MR +GR L PICKLGKNGVY  LV++VREAFEECELVRI C+GMNGSD++KIGA
Sbjct: 368  LQEASGMRNKGRKLIPICKLGKNGVYRDLVRNVREAFEECELVRINCQGMNGSDFRKIGA 427

Query: 545  KLKDLVPCVLISFEYEHILMWRGQDWKFSLPKSEEFAKDGVIVNPPNGADSSSVEHE--- 715
            KL+DLVPCVLISFE EHILMWRG+DWK S  K          VN  + A +SS++     
Sbjct: 428  KLRDLVPCVLISFECEHILMWRGRDWKSSFTKP---------VNDGDEAKNSSIDGATSA 478

Query: 716  ----EALQLLGQNSSDDDTILEPNASWSSSDTDETLXXXXXXXXXXXESVTVDKCVTTHD 883
                E LQ    +  D  T+    +   + D  E L           + + +      ++
Sbjct: 479  TPLLEGLQNETFSVKDASTLNLKTSRMDAEDQGEDLSQKDIDETFAAK-IFISTSTEIYE 537

Query: 884  MVQSPD-DESDISSTSPEHSIGLVPAPDGVIIRDDLSKTATWSSTCTEGVTLLQKKAVEX 1060
               +PD D+S   + S    I        V     +S+ A  + + T+GV  L K+AVE 
Sbjct: 538  SKTTPDNDDSSAVTKSEAMRIASGSELQNVSEGSHVSELAKLNESYTQGVLELLKQAVE- 596

Query: 1061 XXXXXXXXXXXXXXIVHERSVAFAKSAPPGPVYXXXXXXXXXXXXXXXENSDL--KEIEF 1234
                           V++++VAFA+SAPPGPV+               EN +L  K++  
Sbjct: 597  IGSAVVLDANLDADAVYQKAVAFAQSAPPGPVFRRQPRNTVVQKSEMQENGELEVKQVTS 656

Query: 1235 MTVTEDIVKKKSFRNQRLKDFKEVYPDTLPYGSLGVDELAKLL 1363
             +      ++KS + +R K F E Y D++P GSL VDELAKLL
Sbjct: 657  FSKMGGGSERKSSKVRR-KYFNEQYVDSVPQGSLRVDELAKLL 698


>ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus] gi|449521361|ref|XP_004167698.1| PREDICTED:
            CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus]
          Length = 745

 Score =  376 bits (965), Expect = e-102
 Identities = 232/498 (46%), Positives = 283/498 (56%), Gaps = 45/498 (9%)
 Frame = +2

Query: 5    LTEEEIKDLIQGCLKTRRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV 184
            LT+EEIK LI+GC+ + RQLN+GRDGLTHNML+NIHA WKRRRVCKIKCKGVCTVDMDNV
Sbjct: 252  LTKEEIKALIRGCINSNRQLNIGRDGLTHNMLENIHALWKRRRVCKIKCKGVCTVDMDNV 311

Query: 185  RQQLEEKTGGKIIYSRGGVXXXXXXXXXXXXXXXXXXXMLWKPVSPVYPRLVLQVPEGLT 364
            +QQLEE+TGGKIIYSRGG                    MLWKP +PVYPRLV  +P+GLT
Sbjct: 312  KQQLEERTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLVKHIPDGLT 371

Query: 365  LEEATEMRKRGRNLQPICKLGKNGVYSGLVKHVREAFEECELVRICCEGMNGSDYKKIGA 544
            LEE TEMRK+GR L PICKLGKNGVYS LVKHVREAFEECELVRI C+G+NGSD++KIGA
Sbjct: 372  LEEVTEMRKKGRKLIPICKLGKNGVYSALVKHVREAFEECELVRINCQGLNGSDFRKIGA 431

Query: 545  KLKDLVPCVLISFEYEHILMWRGQDWKFSLP---KSEEFAK-----DGVIVNPPNGADSS 700
            KLKDLVPCVLISFE EHIL+WRG+DWK SLP   ++ E AK     +  IV P    D S
Sbjct: 432  KLKDLVPCVLISFESEHILLWRGRDWKSSLPYIERNPEGAKAHGTDETTIVAPSIEQDVS 491

Query: 701  ------SVEHEEALQLLGQNSSDDDTILEPNASWSSSDTDETLXXXXXXXXXXXESVTVD 862
                  S++ E+     G N   D  I E + S        T+            +   D
Sbjct: 492  VKNTLTSLDSEDL--STGGNEDPDSMIAEKSISADVDSLTTTMHESNFVSYDEEATGLDD 549

Query: 863  KCVTTHDMVQSPDDESDISSTSPEHSIGLV-------------------------PAPDG 967
            + + T    +  D  S IS    E   G                              +G
Sbjct: 550  QKLHTATTSEDLDSWSTISGGESEIESGYEFSDSDFDEAEPMEQLEFDSIAATGNSETNG 609

Query: 968  VIIRDDLSKTATWSSTCTEGVTLLQKKAVEXXXXXXXXXXXXXXXIVHERSVAFAKSAPP 1147
            +   +        +S  T+GV  L K+AVE               +++++SVAF++SAPP
Sbjct: 610  LYTSEGSQALTKPTSNATDGVLQLLKQAVENGSAVVLDSSSLDADVIYQQSVAFSQSAPP 669

Query: 1148 GPVYXXXXXXXXXXXXXXXENS---DLKEIE---FMTVTEDIVKKKSFRNQRLKDFKEVY 1309
             PV+               E S   ++KE E    M V  D  KKK  + ++ K+F E Y
Sbjct: 670  SPVFKHERRKKVAADKSEEETSRELEVKEEETAVSMEVGND--KKKDSKTKKNKNFGE-Y 726

Query: 1310 PDTLPYGSLGVDELAKLL 1363
              + P GSLGVDELAKLL
Sbjct: 727  NFSSPQGSLGVDELAKLL 744