BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018490
         (1931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ...   456   e-126
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik...   455   e-125
ref|XP_002331405.1| predicted protein [Populus trichocarpa] gi|2...   451   e-124
ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-lik...   446   e-122
ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-lik...   446   e-122

>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 443

 Score =  456 bits (1174), Expect = e-126
 Identities = 235/422 (55%), Positives = 290/422 (68%)
 Frame = -3

Query: 1755 ENQTEKKVYLHYNHTDSCNSARLNARECYEFMYARPWQQVLDFYSELVNGRLSLSSALFG 1576
            E +T+ K+Y HYNHTDSC S R  ARE ++FMYARPWQ+V DFYS +VNGRLS    LF 
Sbjct: 26   ETKTQNKIYFHYNHTDSCKSFRWTARESFQFMYARPWQEVSDFYSNVVNGRLSFLE-LFR 84

Query: 1575 DERPSSMEPCITEAEACEETDLAGFRTKGKSGRWERVTFKILLSYDGNSFDGWQKQPGLN 1396
             +     +    + ++  +T+L  F  + + GRW RV FKI LSY G SFDGWQKQPGLN
Sbjct: 85   SQMHFVRDDAKIQEDS-NKTELEHFSNEDRFGRWARVNFKIDLSYHGGSFDGWQKQPGLN 143

Query: 1395 TVQGIVERSVGRFVDEKKAEKLKDKGLPLEGCTNVAGRTDKGVTALKQVCSFYTWRKDIK 1216
            TVQG+VE+S+G+FVDEKKA++LK+   PLEGC  VAGRTDKGV+AL+QVCSFYTWRKD++
Sbjct: 144  TVQGLVEKSLGKFVDEKKAQQLKEACKPLEGCAVVAGRTDKGVSALRQVCSFYTWRKDVR 203

Query: 1215 AQDVEDAINEAAPGQLRVISVLKVSREFHPNFSAKWRHYFYIFPLNDDEEGLHSKLGMET 1036
              ++EDAIN +APG++RVISV +VSR FHPNFSAKWR Y YIFP+ND E+   S    + 
Sbjct: 204  PHEIEDAINSSAPGKIRVISVSEVSRVFHPNFSAKWRRYLYIFPINDGEDSEQSFDSEDL 263

Query: 1035 ENYGITEQHEKWINGSDAHLGDKGGAYVACDDASEYESGRKPRSFSVHKVNXXXXXXQGR 856
            EN    E++++  NG      ++    +   D  E E  +KPR FS+ +VN      +G+
Sbjct: 264  ENLRSYEKYDEQRNGCAELTSEEHVEELITSDKDELEGAKKPRIFSICRVNQLLQQLEGK 323

Query: 855  SLSYKMFARDTKASRSTGPPTECIIYHARATEATLPCDNQVPGEGLKVMCVELVANRFLR 676
             LSYK+FARDTKASR+ GPPTEC IYHARATEA LPC +   GEG KVMCVELVANRFLR
Sbjct: 324  LLSYKIFARDTKASRNVGPPTECFIYHARATEARLPCPDH--GEGRKVMCVELVANRFLR 381

Query: 675  RMVRVLVXXXXXXXXXXXXXXALLKLMDXXXXXXXXXXXXPDGLCLVDVGYMEFNPTNCL 496
            +MVRVLV              ALLKLMD            PDGLCL DVGY EF+   C+
Sbjct: 382  KMVRVLVATSIREAAAGAEDDALLKLMDASCRRASAPPAPPDGLCLFDVGYTEFDAQICI 441

Query: 495  IP 490
            +P
Sbjct: 442  VP 443


>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
          Length = 433

 Score =  455 bits (1171), Expect = e-125
 Identities = 239/427 (55%), Positives = 295/427 (69%), Gaps = 4/427 (0%)
 Frame = -3

Query: 1761 VMENQTEKKVYLHYNHTDSCNSARLNARECYEFMYARPWQQVLDFYSELVNGRLSLSSAL 1582
            +MEN+ E KVY+HY HT     +R  ARE ++FMY RPWQQVLDFYS +V GR SL   L
Sbjct: 13   LMENEKENKVYVHYTHTHPTKFSRWTARESHQFMYKRPWQQVLDFYSNVVTGRCSLLGLL 72

Query: 1581 FGDERPSSMEPCITEAEACEETDLAGFRTKGKSGRWERVTFKILLSYDGNSFDGWQKQPG 1402
              +  P      +   EA ++T+     TK + GRW R+TFKI+LSY G SFDGWQKQPG
Sbjct: 73   GIETHPIHDGEIV---EASDKTEFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPG 129

Query: 1401 LNTVQGIVERSVGRFVDEKKAEKLKDKGLPLEGCTNVAGRTDKGVTALKQVCSFYTWRKD 1222
            LNTVQG+VE S+GRFVDE+KA++LK+K LP+EG   VAGRTDKGVTAL+QVCSFYTW+KD
Sbjct: 130  LNTVQGLVEASLGRFVDERKAQQLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKD 189

Query: 1221 IKAQDVEDAINEAAPGQLRVISVLKVSREFHPNFSAKWRHYFYIFPLNDDEEGLH-SKLG 1045
            +K QD+EDAIN AAPG+LRVISV +VSR FHPNFSAKWRHYFYIFPLND ++G   S+  
Sbjct: 190  VKVQDIEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQISENE 249

Query: 1044 METENYGITEQHEKWINGSDAHLGDKGG---AYVACDDASEYESGRKPRSFSVHKVNXXX 874
            M+ +     E++ +   GS+      GG     +  DD  E+ES +KP +FS+ +V+   
Sbjct: 250  MDIQKISFNEKYGE--QGSECPAQYNGGENTENLIFDDDGEFESRKKPSTFSISRVDQLL 307

Query: 873  XXXQGRSLSYKMFARDTKASRSTGPPTECIIYHARATEATLPCDNQVPGEGLKVMCVELV 694
               +G+ LSYK+FARDTKASR+ GPPTEC ++HARATEA L   +   GEG KVMC+ELV
Sbjct: 308  RQLEGKLLSYKIFARDTKASRNIGPPTECFVFHARATEARLQFSDD--GEGTKVMCIELV 365

Query: 693  ANRFLRRMVRVLVXXXXXXXXXXXXXXALLKLMDXXXXXXXXXXXXPDGLCLVDVGYMEF 514
            ANRFLR+MVRVLV              ALLKLMD            PDGLCL+DVG+ EF
Sbjct: 366  ANRFLRKMVRVLVATSIREAAAGAEQDALLKLMDATCRRATAPPAPPDGLCLIDVGFTEF 425

Query: 513  NPTNCLI 493
            +P  C I
Sbjct: 426  DPQICFI 432


>ref|XP_002331405.1| predicted protein [Populus trichocarpa] gi|222873619|gb|EEF10750.1|
            predicted protein [Populus trichocarpa]
          Length = 428

 Score =  451 bits (1160), Expect = e-124
 Identities = 243/434 (55%), Positives = 296/434 (68%), Gaps = 11/434 (2%)
 Frame = -3

Query: 1758 MENQTEKKVYLHYNHTDSCNSARLNARECYEFMYARPWQQVLDFYSELVNGRLSLSSALF 1579
            ME Q +K VY+ YNHTDSC  +R  ARE ++FM+ARPWQ+V+DFYS+ VNG+LSL   LF
Sbjct: 1    MEAQNDK-VYVQYNHTDSCKFSRWTARESFQFMHARPWQEVVDFYSKSVNGQLSLLE-LF 58

Query: 1578 GDERPSSMEPCITEAEACEETD---------LAGFRTKGKSGRWERVTFKILLSYDGNSF 1426
            G +   +ME        C++           L G     KSGRW RVTFKI+LSY G SF
Sbjct: 59   GTQVFFTMELKKAHDVHCDDKIEEVSNETGLLEGVSNVDKSGRWARVTFKIVLSYHGGSF 118

Query: 1425 DGWQKQPGLNTVQGIVERSVGRFVDEKKAEKLKDKGLPLEGCTNVAGRTDKGVTALKQVC 1246
            DGWQKQPGLNTVQG+VE+S+GRFVDEKKA++LK++  PLEGC +VAGRTDKGV+AL+QVC
Sbjct: 119  DGWQKQPGLNTVQGLVEKSLGRFVDEKKAQQLKEQCKPLEGCASVAGRTDKGVSALQQVC 178

Query: 1245 SFYTWRKDIKAQDVEDAINEAAPGQLRVISVLKVSREFHPNFSAKWRHYFYIFPLNDDE- 1069
            SFYTWRKD+K  ++EDAIN+ APG++RV S+ +VSR FHPNFSAKWR Y YIFPLND E 
Sbjct: 179  SFYTWRKDVKPHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGEN 238

Query: 1068 -EGLHSKLGMETENYGITEQHEKWINGSDAHLGDKGGAYVACDDASEYESGRKPRSFSVH 892
             E +  + G+  EN+   E  EK  N       ++        D  E +  +KPRSFSV 
Sbjct: 239  REEIEGEGGI--ENFSSHENCEKQRNECGELASEENVENSIISDEDELQGAKKPRSFSVC 296

Query: 891  KVNXXXXXXQGRSLSYKMFARDTKASRSTGPPTECIIYHARATEATLPCDNQVPGEGLKV 712
            +VN      +G+ LSYKMFARDTKASR+ GPPTEC +YHARATE  LP  +    +G++V
Sbjct: 297  RVNQLLQQLEGKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLPSPDH--EKGIRV 354

Query: 711  MCVELVANRFLRRMVRVLVXXXXXXXXXXXXXXALLKLMDXXXXXXXXXXXXPDGLCLVD 532
            MCVEL+ANRFLR+MVRVLV              ALLKLMD            PDGLCLVD
Sbjct: 355  MCVELIANRFLRKMVRVLVATSVREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCLVD 414

Query: 531  VGYMEFNPTNCLIP 490
            VGY EF+P NCLIP
Sbjct: 415  VGYTEFDPRNCLIP 428


>ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  446 bits (1147), Expect = e-122
 Identities = 246/431 (57%), Positives = 284/431 (65%), Gaps = 8/431 (1%)
 Frame = -3

Query: 1761 VMENQTEKKVYLHYNHTDSCNSARLNARECYEFMYARPWQQVLDFYSELVNGRLSLSSAL 1582
            +MEN+ ++K YLHYNHTD C SAR  ARE Y+FMY RPWQ+VLDFYS  VNGR SLSS L
Sbjct: 22   LMENRAQRKDYLHYNHTDRCRSARWTARESYQFMYGRPWQEVLDFYSHAVNGRFSLSS-L 80

Query: 1581 FGDERPSSMEPCITEAEACEETDLAGFRTKGKSGRWERVTFKILLSYDGNSFDGWQKQPG 1402
             G E     +   T        +L     K K+GRW R TFKI+LSYDGNSFDGWQKQPG
Sbjct: 81   LGTEICRDHDDAETPL-IYNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPG 139

Query: 1401 LNTVQGIVERSVGRFVDEKKAEKLKDKGLPLEGCTNVAGRTDKGVTALKQVCSFYTWRKD 1222
            LNTVQG+VERS+G+FVDEKKA+ LKDK LPLEGC  VAGRTDKGVTAL+QVCSFYTWR D
Sbjct: 140  LNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTD 199

Query: 1221 IKAQDVEDAINEAAPGQLRVISVLKVSREFHPNFSAKWRHYFYIFPLND------DEEGL 1060
            +K QD+ED+IN AAPG+LR  SV +VSR FHPNFSAKWR Y YI PLND      D    
Sbjct: 200  VKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGENMEPDSTTW 259

Query: 1059 HSKLGMETENYGITE--QHEKWINGSDAHLGDKGGAYVACDDASEYESGRKPRSFSVHKV 886
             +    E EN+   E    EK ++G   +L       V   +  E  S  KP++FS+ +V
Sbjct: 260  ENVENREEENFVKIEASNGEKCVDGIHDNL-------VLSPNDEELVSADKPQTFSITRV 312

Query: 885  NXXXXXXQGRSLSYKMFARDTKASRSTGPPTECIIYHARATEATLPCDNQVPGEGLKVMC 706
            N      +G+ LSYKMFARDTKASR+ GPPTEC +YHARA E  LPC  Q  G G  VMC
Sbjct: 313  NQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLEQ--GVGRSVMC 370

Query: 705  VELVANRFLRRMVRVLVXXXXXXXXXXXXXXALLKLMDXXXXXXXXXXXXPDGLCLVDVG 526
            VELVANRFLR+MVRVLV              ALL+LMD            PDGL LVDVG
Sbjct: 371  VELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAPPDGLSLVDVG 430

Query: 525  YMEFNPTNCLI 493
            Y +F+   C I
Sbjct: 431  YTDFDSQICFI 441


>ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
          Length = 444

 Score =  446 bits (1147), Expect = e-122
 Identities = 246/431 (57%), Positives = 284/431 (65%), Gaps = 8/431 (1%)
 Frame = -3

Query: 1761 VMENQTEKKVYLHYNHTDSCNSARLNARECYEFMYARPWQQVLDFYSELVNGRLSLSSAL 1582
            +MEN+ ++K YLHYNHTD C SAR  ARE Y+FMY RPWQ+VLDFYS  VNGR SLSS L
Sbjct: 22   LMENRAQRKDYLHYNHTDRCRSARWTARESYQFMYGRPWQEVLDFYSHAVNGRFSLSS-L 80

Query: 1581 FGDERPSSMEPCITEAEACEETDLAGFRTKGKSGRWERVTFKILLSYDGNSFDGWQKQPG 1402
             G E     +   T        +L     K K+GRW R TFKI+LSYDGNSFDGWQKQPG
Sbjct: 81   LGTEICRDHDDAETPL-IYNSAELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPG 139

Query: 1401 LNTVQGIVERSVGRFVDEKKAEKLKDKGLPLEGCTNVAGRTDKGVTALKQVCSFYTWRKD 1222
            LNTVQG+VERS+G+FVDEKKA+ LKDK LPLEGC  VAGRTDKGVTAL+QVCSFYTWR D
Sbjct: 140  LNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTD 199

Query: 1221 IKAQDVEDAINEAAPGQLRVISVLKVSREFHPNFSAKWRHYFYIFPLND------DEEGL 1060
            +K QD+ED+IN AAPG+LR  SV +VSR FHPNFSAKWR Y YI PLND      D    
Sbjct: 200  VKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRYLYILPLNDGENMEPDSTTW 259

Query: 1059 HSKLGMETENYGITE--QHEKWINGSDAHLGDKGGAYVACDDASEYESGRKPRSFSVHKV 886
             +    E EN+   E    EK ++G   +L       V   +  E  S  KP++FS+ +V
Sbjct: 260  ENVENREEENFVKIEASNGEKCVDGIHDNL-------VLSPNDQELVSADKPQTFSITRV 312

Query: 885  NXXXXXXQGRSLSYKMFARDTKASRSTGPPTECIIYHARATEATLPCDNQVPGEGLKVMC 706
            N      +G+ LSYKMFARDTKASR+ GPPTEC +YHARA E  LPC  Q  G G  VMC
Sbjct: 313  NQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPCLEQ--GVGRSVMC 370

Query: 705  VELVANRFLRRMVRVLVXXXXXXXXXXXXXXALLKLMDXXXXXXXXXXXXPDGLCLVDVG 526
            VELVANRFLR+MVRVLV              ALL+LMD            PDGL LVDVG
Sbjct: 371  VELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAPPDGLSLVDVG 430

Query: 525  YMEFNPTNCLI 493
            Y +F+   C I
Sbjct: 431  YTDFDSQICFI 441