BLASTX nr result

ID: Cimicifuga21_contig00018476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018476
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEW67998.1| gibberellin 3 oxidase 1 [Castanea mollissima]           68   9e-10
ref|XP_002284963.2| PREDICTED: gibberellin 3-beta-dioxygenase 1-...    65   4e-09
emb|CAN80137.1| hypothetical protein VITISV_028510 [Vitis vinifera]    65   4e-09
ref|XP_002303276.1| gibberellin 3-oxidase [Populus trichocarpa] ...    63   3e-08
gb|AAR12160.1| gibberellin 3-oxidase [Populus tremula x Populus ...    63   3e-08

>gb|AEW67998.1| gibberellin 3 oxidase 1 [Castanea mollissima]
          Length = 368

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/52 (57%), Positives = 38/52 (73%)
 Frame = +3

Query: 105 MPSKLSDVFKAHPVHLHDSHLDFESVQELPDSHAWPPVLDYPSDNSYDVDSV 260
           MPS+LSD FKAHPV L+  H DF S+QELPDS+ W  + +YPS  S+  +SV
Sbjct: 1   MPSRLSDAFKAHPVQLYPKHQDFNSLQELPDSYKWTQLDEYPSCESFSSESV 52


>ref|XP_002284963.2| PREDICTED: gibberellin 3-beta-dioxygenase 1-like [Vitis vinifera]
           gi|297743334|emb|CBI36201.3| unnamed protein product
           [Vitis vinifera]
          Length = 365

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/52 (57%), Positives = 38/52 (73%)
 Frame = +3

Query: 105 MPSKLSDVFKAHPVHLHDSHLDFESVQELPDSHAWPPVLDYPSDNSYDVDSV 260
           MPS++SD FKAHP+HL+  HLD  SVQELPD +AW  V + PS +S   +SV
Sbjct: 1   MPSRISDAFKAHPLHLNHRHLDLNSVQELPDLYAWAGVDENPSGDSLITESV 52


>emb|CAN80137.1| hypothetical protein VITISV_028510 [Vitis vinifera]
          Length = 365

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/52 (57%), Positives = 38/52 (73%)
 Frame = +3

Query: 105 MPSKLSDVFKAHPVHLHDSHLDFESVQELPDSHAWPPVLDYPSDNSYDVDSV 260
           MPS++SD FKAHP+HL+  HLD  SVQELPD +AW  V + PS +S   +SV
Sbjct: 1   MPSRISDAFKAHPLHLNHRHLDLNSVQELPDLYAWAGVDENPSGDSLITESV 52


>ref|XP_002303276.1| gibberellin 3-oxidase [Populus trichocarpa]
           gi|222840708|gb|EEE78255.1| gibberellin 3-oxidase
           [Populus trichocarpa]
          Length = 373

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 5/57 (8%)
 Frame = +3

Query: 105 MPSK-LSDVFKAHPVHLHDSHLDFESVQELPDSHAWPPVLD----YPSDNSYDVDSV 260
           MPS+ L+D F++HPVHLH  HLDF S+QE+PDSH W  + D    +PS  S+  +SV
Sbjct: 1   MPSRSLTDAFRSHPVHLHQKHLDFSSLQEIPDSHKWTQLDDIEQQHPSVESFITESV 57


>gb|AAR12160.1| gibberellin 3-oxidase [Populus tremula x Populus tremuloides]
          Length = 373

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 5/57 (8%)
 Frame = +3

Query: 105 MPSK-LSDVFKAHPVHLHDSHLDFESVQELPDSHAWPPVLD----YPSDNSYDVDSV 260
           MPS+ L+D F++HPVHLH  HLDF S+QE+PDSH W  + D    +PS  S+  +SV
Sbjct: 1   MPSRSLADAFRSHPVHLHQKHLDFSSLQEIPDSHKWTQLDDIEQQHPSVESFITESV 57


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