BLASTX nr result

ID: Cimicifuga21_contig00018466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018466
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277233.2| PREDICTED: uncharacterized protein LOC100249...   142   1e-31
emb|CAN66216.1| hypothetical protein VITISV_041165 [Vitis vinifera]   141   2e-31
emb|CBI30260.3| unnamed protein product [Vitis vinifera]              138   1e-30
gb|ADL36702.1| GRF domain class transcription factor [Malus x do...   125   1e-26
ref|XP_002534110.1| conserved hypothetical protein [Ricinus comm...   122   8e-26

>ref|XP_002277233.2| PREDICTED: uncharacterized protein LOC100249368 [Vitis vinifera]
          Length = 394

 Score =  142 bits (357), Expect = 1e-31
 Identities = 106/222 (47%), Positives = 126/222 (56%), Gaps = 21/222 (9%)
 Frame = +2

Query: 2   RSRKPVESSTQPTANVGLRTAIP-----------VAASTSTREATGMHFALSVAAPS--- 139
           RSRKPVE  T   A  G   A+            +AA   T  A G HFALS   PS   
Sbjct: 178 RSRKPVEIPTPAAAGGGGGAAVASVGALKSTTAAIAAQPLTTVAGGTHFALSGPPPSIDL 237

Query: 140 -PLSTRYPEVK-EEQGVLEDQSNNGYIENRSDDGQTLRHFFDDWPRSQQEP-NGININAN 310
             L+   PE K E +G+ E ++ N   + RSD G+ LRHFFDDWPRS QEP N  N + N
Sbjct: 238 LHLNRSPPEPKTENKGLFEHRTENVSGDGRSD-GRVLRHFFDDWPRSIQEPDNAANGSNN 296

Query: 311 PE-TYPTGLSISIPGDNQQSSDFSLKLATGNGEEPSSRERNVGGGVENRLSWRAGWANH- 484
            + T  T LS+SI G    SSD SLKL+TGNG+E S ++ N       +L+W AGW  H 
Sbjct: 297 SQATSSTYLSMSILG--HHSSDVSLKLSTGNGDEQSPQDVN-AERERPQLNWAAGWGTHQ 353

Query: 485 --PMGGPLAEALRQPASSCSPTSVLLGELPRGLGSDISGVST 604
              MGGPLAEALR   S+ SPTSV L +LPRG  SD S VST
Sbjct: 354 SAQMGGPLAEALRSATSNSSPTSV-LHQLPRGTASDTSYVST 394


>emb|CAN66216.1| hypothetical protein VITISV_041165 [Vitis vinifera]
          Length = 437

 Score =  141 bits (355), Expect = 2e-31
 Identities = 106/222 (47%), Positives = 125/222 (56%), Gaps = 21/222 (9%)
 Frame = +2

Query: 2   RSRKPVESSTQPTANVGLRTAIP-----------VAASTSTREATGMHFALSVAAPS--- 139
           RSRKPVE  T   A  G   A+            +AA   T  A G HFALS   PS   
Sbjct: 221 RSRKPVEIPTPAAAGGGGGAAVXSVGALKSTTAAIAAQPLTTVAGGTHFALSGPPPSIDL 280

Query: 140 -PLSTRYPEVK-EEQGVLEDQSNNGYIENRSDDGQTLRHFFDDWPRSQQEP-NGININAN 310
             L+   PE K E +G+ E  + N   + RSD G+ LRHFFDDWPRS QEP N  N + N
Sbjct: 281 LHLNRSPPEPKTENKGLFEHXTENVSGDGRSD-GRVLRHFFDDWPRSIQEPDNAANGSNN 339

Query: 311 PE-TYPTGLSISIPGDNQQSSDFSLKLATGNGEEPSSRERNVGGGVENRLSWRAGWANH- 484
            + T  T LS+SI G    SSD SLKL+TGNG+E S ++ N       +L+W AGW  H 
Sbjct: 340 SQATSSTYLSMSILG--HHSSDVSLKLSTGNGDEQSPQDVN-AERERPQLNWAAGWGTHQ 396

Query: 485 --PMGGPLAEALRQPASSCSPTSVLLGELPRGLGSDISGVST 604
              MGGPLAEALR   S+ SPTSV L +LPRG  SD S VST
Sbjct: 397 SAQMGGPLAEALRSATSNSSPTSV-LHQLPRGTASDTSYVST 437


>emb|CBI30260.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  138 bits (347), Expect = 1e-30
 Identities = 103/218 (47%), Positives = 123/218 (56%), Gaps = 21/218 (9%)
 Frame = +2

Query: 2   RSRKPVESSTQPTANVGLRTAIP-----------VAASTSTREATGMHFALSVAAPS--- 139
           RSRKPVE  T   A  G   A+            +AA   T  A G HFALS   PS   
Sbjct: 157 RSRKPVEIPTPAAAGGGGGAAVASVGALKSTTAAIAAQPLTTVAGGTHFALSGPPPSIDL 216

Query: 140 -PLSTRYPEVK-EEQGVLEDQSNNGYIENRSDDGQTLRHFFDDWPRSQQEP-NGININAN 310
             L+   PE K E +G+ E ++ N   + RSD G+ LRHFFDDWPRS QEP N  N + N
Sbjct: 217 LHLNRSPPEPKTENKGLFEHRTENVSGDGRSD-GRVLRHFFDDWPRSIQEPDNAANGSNN 275

Query: 311 PE-TYPTGLSISIPGDNQQSSDFSLKLATGNGEEPSSRERNVGGGVENRLSWRAGWANH- 484
            + T  T LS+SI G    SSD SLKL+TGNG+E S ++ N       +L+W AGW  H 
Sbjct: 276 SQATSSTYLSMSILG--HHSSDVSLKLSTGNGDEQSPQDVN-AERERPQLNWAAGWGTHQ 332

Query: 485 --PMGGPLAEALRQPASSCSPTSVLLGELPRGLGSDIS 592
              MGGPLAEALR   S+ SPTSV L +LPRG  SD S
Sbjct: 333 SAQMGGPLAEALRSATSNSSPTSV-LHQLPRGTASDTS 369


>gb|ADL36702.1| GRF domain class transcription factor [Malus x domestica]
          Length = 394

 Score =  125 bits (313), Expect = 1e-26
 Identities = 89/216 (41%), Positives = 115/216 (53%), Gaps = 15/216 (6%)
 Frame = +2

Query: 2   RSRKPVESSTQPTANV------GLRTAIPVAASTSTREATGMHFALSVAAPSP------L 145
           RSRKPVE +T  TA        G  T++  A + +   ATG HFALS ++ SP      L
Sbjct: 183 RSRKPVEVATTTTAATTTAGGGGSGTSLNNATTVTNTSATGTHFALSGSSSSPSIDLLHL 242

Query: 146 STRYPEVKEEQGVLEDQSNNGYIENRSDDGQTLRHFFDDWPRSQQEPNGININANPETYP 325
           +    E K E   L    +  +   +SD    LR FFDDWP   QE +    NA+     
Sbjct: 243 NQSSSEAKPENMSLFGPCSEVFASAKSDS-HVLRPFFDDWPGKLQELDNARSNASSMNSA 301

Query: 326 TGLSISIPGDNQQSSDFSLKLATGNGEEPSSRERNVGGGVENRLSWRAGWANH---PMGG 496
           T LSISI G    SSD SLKL+TGNG EP  ++ +   G +  L+W AGWA +    MGG
Sbjct: 302 TSLSISIRGTT--SSDVSLKLSTGNGVEPGHQDSHAERG-QPHLNWPAGWATNQMASMGG 358

Query: 497 PLAEALRQPASSCSPTSVLLGELPRGLGSDISGVST 604
           PLAEALR  ++S S  + +L  LPR   S+ S +ST
Sbjct: 359 PLAEALRSSSNSNSSPTSVLHRLPRASASEASFIST 394


>ref|XP_002534110.1| conserved hypothetical protein [Ricinus communis]
           gi|223525833|gb|EEF28270.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 428

 Score =  122 bits (306), Expect = 8e-26
 Identities = 99/236 (41%), Positives = 124/236 (52%), Gaps = 35/236 (14%)
 Frame = +2

Query: 2   RSRKPVESSTQPTANVGLRT------------------AIPVAASTSTRE---------A 100
           RSRKPVE    PT N    T                  AI  A S+S+           A
Sbjct: 203 RSRKPVEI---PTTNSSTSTNTNSTGIGGGGGGGSAGGAISAAFSSSSPAIVAPLLSGVA 259

Query: 101 TGMHFALSVAAPSP----LSTRYPEVKEE-QGVLEDQSNNGYIENRSDDGQTLRHFFDDW 265
           +G   + S  +PS     L+ R  + K E +G+L    N   + NRSD G  LRHFFDDW
Sbjct: 260 SGTSLSFSGHSPSNELLHLNNRSSDPKAEIKGLLLGPQNE--VANRSD-GHILRHFFDDW 316

Query: 266 PRSQQEPNGININANPETYPTGLSISIPGDNQQSSDFSLKLATGNGEEPSSRERNVGGGV 445
           PRS QEP+    NA+P    T LSIS+ G++  SSD SLKL+TGNGEEP+   R      
Sbjct: 317 PRSLQEPDNTASNASPMNSATCLSISMSGNS--SSDVSLKLSTGNGEEPAG-SRGSEREH 373

Query: 446 ENRLSWRAGWANH---PMGGPLAEALRQPASSCSPTSVLLGELPRGLGSDISGVST 604
             +++W  GW  +   PMGGPLAEALR   S+ SPTSV L +LP+G  S+   VST
Sbjct: 374 HPQVNWTGGWGTNQMSPMGGPLAEALRSSTSNSSPTSV-LHQLPQGSTSETIYVST 428


Top