BLASTX nr result

ID: Cimicifuga21_contig00018450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018450
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]   125   5e-27
emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera]   125   5e-27
emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera]   125   5e-27
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]                    124   1e-26
dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]                    124   1e-26

>emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]
          Length = 1453

 Score =  125 bits (313), Expect = 5e-27
 Identities = 55/105 (52%), Positives = 73/105 (69%)
 Frame = -1

Query: 317 GGEYVNTPFQSYCRDWGIHHRLSCPHTPEQNGIAERKHRHIADMARTLLTTAHVPLTLWA 138
           G E+ +  FQS+ + +GIHH++SCP+TP QNG AERKHRH+ +    LL  +HVP   W 
Sbjct: 540 GAEFTSNRFQSHLQQFGIHHQMSCPYTPSQNGRAERKHRHVTETGLALLFHSHVPPRYWV 599

Query: 137 EAVSTAVYLINRLPSPILQWSNPFTRLFGQSPSYTDFCTFGCACY 3
           +A STA Y+INRLP P+L   +PF  LFG+SP+Y +F  FGC  Y
Sbjct: 600 DAFSTATYIINRLPLPVLGGLSPFEVLFGKSPNYENFHPFGCRVY 644


>emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera]
          Length = 845

 Score =  125 bits (313), Expect = 5e-27
 Identities = 55/105 (52%), Positives = 73/105 (69%)
 Frame = -1

Query: 317 GGEYVNTPFQSYCRDWGIHHRLSCPHTPEQNGIAERKHRHIADMARTLLTTAHVPLTLWA 138
           GGEY++T FQ++    GI H+ SCP TP+QNG+AERK+RH+ D+ RTLL  + VP   W 
Sbjct: 600 GGEYLSTEFQAFLASKGIIHQRSCPSTPQQNGVAERKNRHLLDVVRTLLLESSVPSMFWV 659

Query: 137 EAVSTAVYLINRLPSPILQWSNPFTRLFGQSPSYTDFCTFGCACY 3
           EA+ TA +LINRLPS +L   +P+ RLF + PSY     FGC C+
Sbjct: 660 EALKTATHLINRLPSQVLHMESPYFRLFAKQPSYDHLRIFGCVCF 704


>emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera]
          Length = 1576

 Score =  125 bits (313), Expect = 5e-27
 Identities = 55/105 (52%), Positives = 73/105 (69%)
 Frame = -1

Query: 317  GGEYVNTPFQSYCRDWGIHHRLSCPHTPEQNGIAERKHRHIADMARTLLTTAHVPLTLWA 138
            GGEY++T FQ++    GI H+ SCP TP+QNG+AERK+RH+ D+ RTLL  + VP   W 
Sbjct: 765  GGEYLSTEFQAFLASKGIIHQRSCPSTPQQNGVAERKNRHLLDVVRTLLLESSVPSIFWV 824

Query: 137  EAVSTAVYLINRLPSPILQWSNPFTRLFGQSPSYTDFCTFGCACY 3
            EA+ TA +LINRLPS +L   +P+ RLF + PSY     FGC C+
Sbjct: 825  EALKTATHLINRLPSQVLHMESPYFRLFAKQPSYDHLRIFGCVCF 869


>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/105 (57%), Positives = 71/105 (67%)
 Frame = -1

Query: 317 GGEYVNTPFQSYCRDWGIHHRLSCPHTPEQNGIAERKHRHIADMARTLLTTAHVPLTLWA 138
           GGE+V    + Y    GI H  S PHTPE NG++ERKHRHI +M  TLL+ A VP T W 
Sbjct: 592 GGEFV--VLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWP 649

Query: 137 EAVSTAVYLINRLPSPILQWSNPFTRLFGQSPSYTDFCTFGCACY 3
            A S AVYLINRLP+P+LQ  +PF +LFGQ P+Y     FGCACY
Sbjct: 650 YAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACY 694


>dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/105 (57%), Positives = 71/105 (67%)
 Frame = -1

Query: 317 GGEYVNTPFQSYCRDWGIHHRLSCPHTPEQNGIAERKHRHIADMARTLLTTAHVPLTLWA 138
           GGE+V    + Y    GI H  S PHTPE NG++ERKHRHI +M  TLL+ A VP T W 
Sbjct: 592 GGEFV--VLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWL 649

Query: 137 EAVSTAVYLINRLPSPILQWSNPFTRLFGQSPSYTDFCTFGCACY 3
            A S AVYLINRLP+P+LQ  +PF +LFGQ P+Y     FGCACY
Sbjct: 650 YAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACY 694


Top