BLASTX nr result

ID: Cimicifuga21_contig00018439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018439
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266506.1| PREDICTED: uncharacterized protein LOC100253...   119   3e-25
ref|XP_003528734.1| PREDICTED: uncharacterized protein LOC100820...   106   2e-21
ref|NP_001241006.1| uncharacterized protein LOC100816015 [Glycin...   105   3e-21
ref|XP_002331220.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_002534004.1| conserved hypothetical protein [Ricinus comm...   100   9e-20

>ref|XP_002266506.1| PREDICTED: uncharacterized protein LOC100253160 [Vitis vinifera]
           gi|297742935|emb|CBI35802.3| unnamed protein product
           [Vitis vinifera]
          Length = 162

 Score =  119 bits (297), Expect = 3e-25
 Identities = 65/124 (52%), Positives = 84/124 (67%), Gaps = 2/124 (1%)
 Frame = -2

Query: 398 RKKSTMDHQRSLNKASEGPVGLRILIQCPGWDSNTIVKPAFRLIRLASPTHRIPP--CIQ 225
           +++       S  ++S  PVGLRIL Q    +SN ++K A RL R+ +P    PP     
Sbjct: 14  KRRPNFPGHESFKRSSVDPVGLRILTQFSHGESNLVLKSACRL-RVPTPP---PPSGASP 69

Query: 224 ESSFLKACYLCNKRLSPQEDIYMYRGDQGFCSIQCRCRQIFLDEMKEIEASTKQMLASYR 45
           ES FLK+CYLCNK L+P +DIYM R D+GFCS++CR RQI +DE KEIE STK++LAS R
Sbjct: 70  ESCFLKSCYLCNKELTPDKDIYM-RSDEGFCSVECRNRQIVMDETKEIETSTKKILASSR 128

Query: 44  HCRS 33
           HCRS
Sbjct: 129 HCRS 132


>ref|XP_003528734.1| PREDICTED: uncharacterized protein LOC100820059 [Glycine max]
          Length = 156

 Score =  106 bits (264), Expect = 2e-21
 Identities = 61/117 (52%), Positives = 78/117 (66%), Gaps = 2/117 (1%)
 Frame = -2

Query: 377 HQRSLNKASEGPVGLRILIQCPGWDS--NTIVKPAFRLIRLASPTHRIPPCIQESSFLKA 204
           H RS  +++   VGLR+L Q    +S  N ++K A R     S    IP   Q+  FLK 
Sbjct: 26  HVRSF-ESTNMDVGLRLLPQITSSNSTSNVLLKSAVRKANQQS----IP---QDFCFLKT 77

Query: 203 CYLCNKRLSPQEDIYMYRGDQGFCSIQCRCRQIFLDEMKEIEASTKQMLASYRHCRS 33
           C LCNK+LSP +DIYMY  DQGFCS++CR RQI LDEM+E+E+STKQM+A+YR C S
Sbjct: 78  CNLCNKQLSPDKDIYMYSRDQGFCSVECRNRQIVLDEMRELESSTKQMVAAYRQCSS 134


>ref|NP_001241006.1| uncharacterized protein LOC100816015 [Glycine max]
           gi|255647062|gb|ACU23999.1| unknown [Glycine max]
          Length = 156

 Score =  105 bits (263), Expect = 3e-21
 Identities = 60/117 (51%), Positives = 78/117 (66%), Gaps = 2/117 (1%)
 Frame = -2

Query: 377 HQRSLNKASEGPVGLRILIQCPGWD--SNTIVKPAFRLIRLASPTHRIPPCIQESSFLKA 204
           H RS  +++   VGLR+L Q       SN ++K A R     S    IP   Q+  FLK 
Sbjct: 26  HVRSF-ESTNMDVGLRLLPQITSSKNTSNVLLKSAMRKTNQQS----IP---QDFCFLKT 77

Query: 203 CYLCNKRLSPQEDIYMYRGDQGFCSIQCRCRQIFLDEMKEIEASTKQMLASYRHCRS 33
           C LCNK+LSP +DIYMYRGDQGFCS++CR RQI LD+M+E+E STK+++A+YR C S
Sbjct: 78  CNLCNKQLSPDKDIYMYRGDQGFCSVECRNRQIVLDDMRELENSTKKIVAAYRQCSS 134


>ref|XP_002331220.1| predicted protein [Populus trichocarpa] gi|222873341|gb|EEF10472.1|
           predicted protein [Populus trichocarpa]
          Length = 104

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/88 (56%), Positives = 61/88 (69%)
 Frame = -2

Query: 302 SNTIVKPAFRLIRLASPTHRIPPCIQESSFLKACYLCNKRLSPQEDIYMYRGDQGFCSIQ 123
           SN + K A +  RL     R+     E  +L +C LCNK LSP +DIYMYRGDQGFCS +
Sbjct: 1   SNVVTKSALKTQRL-----RVQATTIEYCYLISCNLCNKMLSPDKDIYMYRGDQGFCSTE 55

Query: 122 CRCRQIFLDEMKEIEASTKQMLASYRHC 39
           CR RQI LDEM+E+EASTK+ L SY+HC
Sbjct: 56  CRNRQIVLDEMRELEASTKERLKSYKHC 83


>ref|XP_002534004.1| conserved hypothetical protein [Ricinus communis]
           gi|223525994|gb|EEF28375.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 155

 Score =  100 bits (250), Expect = 9e-20
 Identities = 59/107 (55%), Positives = 69/107 (64%), Gaps = 4/107 (3%)
 Frame = -2

Query: 341 VGLRILIQCPGWDS--NTIVKPAFRLIRLASPTHRIPPCIQ-ESSFLKACYLCNKRLSPQ 171
           VGL+ L+      S  N + K A R  +     HR P     ES +LK C+LCNK LS  
Sbjct: 19  VGLQTLVHVSEGKSKSNVVTKSAMR--KAPHHRHRRPHHQSTESCYLKTCHLCNKNLSLD 76

Query: 170 EDIYMYRGDQGFCSIQCRCRQIFLDEMKEIEASTKQMLASY-RHCRS 33
           +DIYMYRGDQGFCSI+CR RQI LDEM+E+EAST QM  SY RHC S
Sbjct: 77  KDIYMYRGDQGFCSIECRNRQIVLDEMRELEASTVQMRKSYNRHCSS 123


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