BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018431
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containi...    85   5e-15
ref|XP_002531188.1| pentatricopeptide repeat-containing protein,...    80   2e-13
ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]    69   5e-10
ref|XP_003636527.1| Pentatricopeptide repeat-containing protein ...    65   6e-09

>ref|XP_003633738.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Vitis vinifera]
          Length = 547

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 39/63 (61%), Positives = 50/63 (79%)
 Frame = +1

Query: 1   RSLCHAGKLKEAEKYLQIMEDRSIVPNKCIYETLVHSHFQSGNMARALQLYNEMARRGLK 180
           RSLC   KL++AEKYL+IM+DRSI  + C+YETL+ S+F+ G+  RA QL+NEM  RGLK
Sbjct: 479 RSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLISSYFEKGDELRASQLHNEMVSRGLK 538

Query: 181 PSC 189
           PSC
Sbjct: 539 PSC 541


>ref|XP_002531188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529229|gb|EEF31203.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 35/63 (55%), Positives = 47/63 (74%)
 Frame = +1

Query: 1   RSLCHAGKLKEAEKYLQIMEDRSIVPNKCIYETLVHSHFQSGNMARALQLYNEMARRGLK 180
           RSLCH GKL++AEKYL+IM+ RS+ P++ +YE L+  H +  + ARALQLYNEM  +G  
Sbjct: 487 RSLCHCGKLEQAEKYLRIMKGRSLNPSQQVYEALIAGHLEKSDTARALQLYNEMISKGFT 546

Query: 181 PSC 189
           P C
Sbjct: 547 PCC 549


>ref|XP_002305195.1| predicted protein [Populus trichocarpa] gi|222848159|gb|EEE85706.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/63 (52%), Positives = 45/63 (71%)
 Frame = +1

Query: 1   RSLCHAGKLKEAEKYLQIMEDRSIVPNKCIYETLVHSHFQSGNMARALQLYNEMARRGLK 180
           + LC+ GKL+EAEKYL+IM  RS+ P + +YE L+  +F+ G+  RAL LYNEM  +GLK
Sbjct: 486 KGLCNCGKLEEAEKYLRIMIGRSLNPREDVYEALIKVYFEKGDKRRALNLYNEMVSKGLK 545

Query: 181 PSC 189
             C
Sbjct: 546 LCC 548


>emb|CAN82481.1| hypothetical protein VITISV_012747 [Vitis vinifera]
          Length = 642

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/54 (57%), Positives = 42/54 (77%)
 Frame = +1

Query: 1   RSLCHAGKLKEAEKYLQIMEDRSIVPNKCIYETLVHSHFQSGNMARALQLYNEM 162
           RSLC   KL++AEKYL+IM+DRSI  + C+YETL+  +F+ G+  RA QL+NEM
Sbjct: 479 RSLCQCRKLEKAEKYLRIMKDRSIAISTCVYETLISGYFEKGDELRASQLHNEM 532


>ref|XP_003636527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355502462|gb|AES83665.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 263

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/60 (55%), Positives = 40/60 (66%)
 Frame = +1

Query: 7   LCHAGKLKEAEKYLQIMEDRSIVPNKCIYETLVHSHFQSGNMARALQLYNEMARRGLKPS 186
           LC  GK+ +AEK L+IM+ RS+ PN  IYETL+  H Q GN  RA QL NEMA   L+ S
Sbjct: 204 LCRCGKVDDAEKCLRIMKGRSLAPNVGIYETLITCHVQKGNSVRAFQLRNEMASLELQRS 263