BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018406
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309447.1| predicted protein [Populus trichocarpa] gi|1...   170   3e-40
ref|XP_002516178.1| RING-H2 finger protein ATL3J, putative [Rici...   154   2e-35
ref|XP_002324208.1| predicted protein [Populus trichocarpa] gi|2...   144   2e-32
ref|XP_002874020.1| zinc finger family protein [Arabidopsis lyra...   139   9e-31
ref|NP_568404.1| RING/U-box domain-containing protein [Arabidops...   136   4e-30

>ref|XP_002309447.1| predicted protein [Populus trichocarpa] gi|118483893|gb|ABK93837.1|
           unknown [Populus trichocarpa]
           gi|222855423|gb|EEE92970.1| predicted protein [Populus
           trichocarpa]
          Length = 168

 Score =  170 bits (430), Expect = 3e-40
 Identities = 91/174 (52%), Positives = 116/174 (66%), Gaps = 8/174 (4%)
 Frame = -1

Query: 656 MGFSVEYSGLVLTHLLYNAALVLSLVKSVFCWATKSMGFDHDXXXXXXXTVQQTGNTLTA 477
           MGF VE SGL++THLLY AALVL++++    WA +     H        +++++    ++
Sbjct: 1   MGFFVEESGLIVTHLLYKAALVLAVLRWALAWALRFKNRTH-LASPSNDSLRRSHPVPSS 59

Query: 476 QMIRDRLDVVTYGDV---MPGSCCDTCAVCLNELKKKDRVRELRNCCHVFHIKCIDRWLD 306
           Q IRD L + T+GDV   MPG  CDTCAVCL++L+ +D VRELRNCCHVFH  CIDRW+D
Sbjct: 60  QQIRDGLILTTFGDVTERMPG-VCDTCAVCLSQLRDQDEVRELRNCCHVFHRDCIDRWVD 118

Query: 305 HG-----DQKNCPLCRAPLLVTSFGSDLGCGMMTRSEPSWAVERLLYLFGDDLL 159
           H      +   CPLCRAPLL TS          TR+EPSWAVER+LYLFGDDL+
Sbjct: 119 HDHEHDENHNTCPLCRAPLLTTSQSL-----ARTRAEPSWAVERILYLFGDDLV 167


>ref|XP_002516178.1| RING-H2 finger protein ATL3J, putative [Ricinus communis]
           gi|223544664|gb|EEF46180.1| RING-H2 finger protein
           ATL3J, putative [Ricinus communis]
          Length = 177

 Score =  154 bits (390), Expect = 2e-35
 Identities = 82/175 (46%), Positives = 107/175 (61%), Gaps = 10/175 (5%)
 Frame = -1

Query: 656 MGFSVEYSGLVLTHLLYNAALVLSLVKSVFCWATKSMGFDH---DXXXXXXXTVQQTGNT 486
           MGF VE S +++THLLY AA++L++ +    WA +     +           ++ Q+   
Sbjct: 1   MGFFVEDSDVIVTHLLYKAAVILAVARWALSWALRFRSRTYLSPSSSSSSNDSLHQSCAL 60

Query: 485 LTAQMIRDRLDVVTYGDVMP--GSCCDTCAVCLNELKKKDRVRELRNCCHVFHIKCIDRW 312
            ++Q IRD L + T+GD+       CDTCAVCL +L + D VRELRNCCHVFH +CIDRW
Sbjct: 61  PSSQQIRDGLILTTFGDITDRISGACDTCAVCLGQLSELDEVRELRNCCHVFHKECIDRW 120

Query: 311 LDH-----GDQKNCPLCRAPLLVTSFGSDLGCGMMTRSEPSWAVERLLYLFGDDL 162
           +DH      + K CPLCRAPLL  S    L      + EPSWAVER+LYLFGDDL
Sbjct: 121 VDHDHDHDDNHKTCPLCRAPLLTAS--QSLAWINNNKCEPSWAVERILYLFGDDL 173


>ref|XP_002324208.1| predicted protein [Populus trichocarpa] gi|222865642|gb|EEF02773.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  144 bits (363), Expect = 2e-32
 Identities = 82/180 (45%), Positives = 106/180 (58%), Gaps = 14/180 (7%)
 Frame = -1

Query: 656 MGFSVEYSGLVLTHLLYNAALVLSLVKSVFCWATKSMGFDHDXXXXXXXTVQQTGNTLTA 477
           MGF  E SGL++ HL+Y AAL L+++   + WA +     H        ++QQ     + 
Sbjct: 1   MGFFAEESGLIVAHLIYKAALALAVLIWAWDWALRFKNRAH-LSSSSNDSLQQYHPVPSP 59

Query: 476 QMIRDRLDVVTYGDVM---PGSCCDTCAVCLNELKKKDRVRELRNCCHVFHIKCIDRWLD 306
             + D L   T+ DV+   PG  CDTCAVCL++L+ +D VRELRNC HVFH +CIDRW+D
Sbjct: 60  HQVMDGLISTTFNDVIERVPG-VCDTCAVCLSQLRDQDEVRELRNCGHVFHKECIDRWVD 118

Query: 305 HG-----------DQKNCPLCRAPLLVTSFGSDLGCGMMTRSEPSWAVERLLYLFGDDLL 159
           H            +   CPLCRAPL  TS          TR+EPSWAVER+LYLFGDDL+
Sbjct: 119 HDHDHDHDHDHDENHNTCPLCRAPLPTTSRSL-----AWTRTEPSWAVERILYLFGDDLI 173


>ref|XP_002874020.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319857|gb|EFH50279.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 178

 Score =  139 bits (349), Expect = 9e-31
 Identities = 77/182 (42%), Positives = 106/182 (58%), Gaps = 17/182 (9%)
 Frame = -1

Query: 656 MGFSVEYSGLVLTHLLYNAALVLSLVKSVFCWATKSMGFDHDXXXXXXXTVQQTGNTLTA 477
           M F +E+SGL++T LLY  A+++++++ +  W  +              +V  +   +++
Sbjct: 1   MSFFIEHSGLIVTQLLYKMAVLITILRWILAWILRYRSRSRSTSSSSSPSVSPS---ISS 57

Query: 476 QMIRDRLDVVTYGDVM---PGSCCDTCAVCLNELKKKDRVRELRNCCHVFHIKCIDRWLD 306
           Q I++ L V T+ D     P    DTCAVCL +L+  D VRELRNC H+FH +CIDRWLD
Sbjct: 58  QTIKESLSVTTFRDAAERSPAMINDTCAVCLGDLEDGDEVRELRNCSHMFHRECIDRWLD 117

Query: 305 H----GDQKN---------CPLCRAPLLVTSFGSDLGCG-MMTRSEPSWAVERLLYLFGD 168
           +    GD  N         CPLCR PLL  +  S   CG    ++EPSWAVERLLYLFGD
Sbjct: 118 YECCGGDDNNEAEEDNHRTCPLCRTPLLAANTTS---CGDWPAKNEPSWAVERLLYLFGD 174

Query: 167 DL 162
           DL
Sbjct: 175 DL 176


>ref|NP_568404.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|16209696|gb|AAL14405.1| AT5g20880/F22D1_50
           [Arabidopsis thaliana] gi|23463037|gb|AAN33188.1|
           At5g20880/F22D1_50 [Arabidopsis thaliana]
           gi|26451529|dbj|BAC42862.1| unknown protein [Arabidopsis
           thaliana] gi|332005517|gb|AED92900.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 176

 Score =  136 bits (343), Expect = 4e-30
 Identities = 77/182 (42%), Positives = 105/182 (57%), Gaps = 17/182 (9%)
 Frame = -1

Query: 656 MGFSVEYSGLVLTHLLYNAALVLSLVKSVFCWATKSMGFDHDXXXXXXXTVQQTGNTLTA 477
           M F +E SGL++T LLY  A+++++++ +  W  +                     ++++
Sbjct: 1   MSFFIEDSGLIVTQLLYKMAVLITVLRWILAWILRYRSRSRSTSSSTSACP-----SISS 55

Query: 476 QMIRDRLDVVTYGDVM---PGSCCDTCAVCLNELKKKDRVRELRNCCHVFHIKCIDRWLD 306
           Q I++ L V T+ D     P    DTCAVCL +L+  D VRELRNC H+FH +CIDRWLD
Sbjct: 56  QAIKESLSVTTFRDAAERSPAMINDTCAVCLGDLEDGDEVRELRNCSHMFHRECIDRWLD 115

Query: 305 H----GDQKN---------CPLCRAPLLVTSFGSDLGCG-MMTRSEPSWAVERLLYLFGD 168
           +    GD+ N         CPLCR PLL  +  S   CG   T++EPSWAVERLLYLFGD
Sbjct: 116 YECCGGDENNEGEEDNHRTCPLCRTPLLAANTTS---CGDWPTKNEPSWAVERLLYLFGD 172

Query: 167 DL 162
           DL
Sbjct: 173 DL 174