BLASTX nr result

ID: Cimicifuga21_contig00018398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018398
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526965.1| conserved hypothetical protein [Ricinus comm...   142   3e-32
ref|XP_002526964.1| conserved hypothetical protein [Ricinus comm...   142   4e-32
ref|XP_002515051.1| conserved hypothetical protein [Ricinus comm...   137   9e-31
ref|XP_002526966.1| conserved hypothetical protein [Ricinus comm...   136   2e-30
ref|XP_002336294.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30

>ref|XP_002526965.1| conserved hypothetical protein [Ricinus communis]
           gi|223533717|gb|EEF35452.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 809

 Score =  142 bits (358), Expect = 3e-32
 Identities = 65/92 (70%), Positives = 76/92 (82%)
 Frame = +3

Query: 3   RLICLYGGEDMDWIRKFTASARAVSQVIRTPIELVYVGKSNPKERVRKNNTLISAEKLSH 182
           R ICLYGGEDM+WIRKFT++ARAV+Q    P+ +VYVGKSNPKERVR+N + I  EKLSH
Sbjct: 609 RYICLYGGEDMEWIRKFTSTARAVAQAAGIPLGMVYVGKSNPKERVRRNVSTIMVEKLSH 668

Query: 183 CWPDLTSIWFFWVRLESMWYSKMQHGKTVDND 278
            W DLTSIW+FWVR+ESMW SK Q GKT +ND
Sbjct: 669 YWQDLTSIWYFWVRIESMWRSKNQLGKTSEND 700


>ref|XP_002526964.1| conserved hypothetical protein [Ricinus communis]
           gi|223533716|gb|EEF35451.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 805

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/92 (70%), Positives = 75/92 (81%)
 Frame = +3

Query: 3   RLICLYGGEDMDWIRKFTASARAVSQVIRTPIELVYVGKSNPKERVRKNNTLISAEKLSH 182
           R ICLYGGEDM+WIRKFT++ARAV+Q    P+ +VYVGKSNPKERVR+N   I  EKLSH
Sbjct: 605 RYICLYGGEDMEWIRKFTSTARAVAQAAGIPLGMVYVGKSNPKERVRRNIATIMVEKLSH 664

Query: 183 CWPDLTSIWFFWVRLESMWYSKMQHGKTVDND 278
            W DLTSIW+FWVR+ESMW SK Q GKT +ND
Sbjct: 665 YWQDLTSIWYFWVRIESMWRSKNQLGKTSEND 696


>ref|XP_002515051.1| conserved hypothetical protein [Ricinus communis]
           gi|223546102|gb|EEF47605.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 701

 Score =  137 bits (345), Expect = 9e-31
 Identities = 60/92 (65%), Positives = 76/92 (82%)
 Frame = +3

Query: 3   RLICLYGGEDMDWIRKFTASARAVSQVIRTPIELVYVGKSNPKERVRKNNTLISAEKLSH 182
           + ICLYGGED++WIRKFT +A A++Q     +E++YVGKSNP+E+VRKNN +I  EKLSH
Sbjct: 497 KYICLYGGEDIEWIRKFTMTANALAQAAGIDLEMLYVGKSNPREKVRKNNIIIQNEKLSH 556

Query: 183 CWPDLTSIWFFWVRLESMWYSKMQHGKTVDND 278
              DLT IWFFWVRLESMW+SK+QH +TV+ND
Sbjct: 557 VLQDLTLIWFFWVRLESMWHSKVQHNRTVEND 588


>ref|XP_002526966.1| conserved hypothetical protein [Ricinus communis]
           gi|223533718|gb|EEF35453.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 792

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/92 (67%), Positives = 73/92 (79%)
 Frame = +3

Query: 3   RLICLYGGEDMDWIRKFTASARAVSQVIRTPIELVYVGKSNPKERVRKNNTLISAEKLSH 182
           R +CLYGGEDM+WIR FT +ARAV+Q    P+ +VYVGKSNPKERVR+N + I  EKLSH
Sbjct: 592 RYVCLYGGEDMEWIRNFTNTARAVAQASGIPLGMVYVGKSNPKERVRRNVSTIMVEKLSH 651

Query: 183 CWPDLTSIWFFWVRLESMWYSKMQHGKTVDND 278
            W DLTSIW+FWVR+ESMW SK Q GK  +ND
Sbjct: 652 YWQDLTSIWYFWVRIESMWRSKNQLGKNSEND 683


>ref|XP_002336294.1| predicted protein [Populus trichocarpa] gi|222834226|gb|EEE72703.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score =  136 bits (343), Expect = 2e-30
 Identities = 61/92 (66%), Positives = 76/92 (82%)
 Frame = +3

Query: 3   RLICLYGGEDMDWIRKFTASARAVSQVIRTPIELVYVGKSNPKERVRKNNTLISAEKLSH 182
           + ICLYGGED++WIRKFTA+A+AV++  R  +E++YVGKSNPKE+ RK N +I  E LSH
Sbjct: 116 KFICLYGGEDIEWIRKFTATAKAVAKDARIQLEMLYVGKSNPKEKARKINGVIVNENLSH 175

Query: 183 CWPDLTSIWFFWVRLESMWYSKMQHGKTVDND 278
             PDLT IWFFWVRLESMW+SK+QH +T DND
Sbjct: 176 VLPDLTLIWFFWVRLESMWHSKVQHQRTADND 207


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