BLASTX nr result
ID: Cimicifuga21_contig00018372
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00018372
(1874 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284961.1| PREDICTED: katanin p60 ATPase-containing sub... 871 0.0
gb|ABK96572.1| unknown [Populus trichocarpa x Populus deltoides] 865 0.0
ref|XP_004135829.1| PREDICTED: katanin p60 ATPase-containing sub... 862 0.0
gb|AAP83637.1| katanin [Gossypium hirsutum] 860 0.0
ref|XP_003531690.1| PREDICTED: katanin p60 ATPase-containing sub... 858 0.0
>ref|XP_002284961.1| PREDICTED: katanin p60 ATPase-containing subunit [Vitis vinifera]
gi|297743333|emb|CBI36200.3| unnamed protein product
[Vitis vinifera]
Length = 521
Score = 871 bits (2250), Expect = 0.0
Identities = 440/518 (84%), Positives = 474/518 (91%), Gaps = 2/518 (0%)
Frame = +3
Query: 156 QDHLKLARDYANEGLYDTSIIFFDGAIAQINKHLSTLDDPLIRSKWMNCKKALSDEIDIV 335
QDHLKLAR+YA EGLYDTSIIFFDGAIAQINKHL+TLDDPLIR+KWMN KKALS+E ++V
Sbjct: 11 QDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRTKWMNVKKALSEETEVV 70
Query: 336 KQLDAERRALKEALGNRRPPSPPIPTKSSFVFQPLDEYPTSSGAGTPIDDPDVWAPPNRD 515
KQLDAERRA KE G RRP SPPI TKSSFVFQPLDEYPTSSGA P+DDPDVW PP+RD
Sbjct: 71 KQLDAERRAFKEIPGGRRPSSPPISTKSSFVFQPLDEYPTSSGA--PMDDPDVWRPPSRD 128
Query: 516 NGSRRPTRAGQMGIRKSPQDATWARGAA-SKAAPTG-RGAKTNRSTSGPRASTASAAGKR 689
SRR R+GQ+G+RK+ QD TW RG+ AAP G + ++R+ SG RAST G++
Sbjct: 129 TTSRRSARSGQVGMRKTSQDGTWPRGSTRGGAAPRGGKSGASSRTHSGVRASTT---GRK 185
Query: 690 GSGANKSNSTKSDSGNGEAEDGKTKRLQYEGPDPDLAAMLERDVLETSPGVRWDDVAGLS 869
GS +KSN+ K+DS NG+AEDGK+KR QYEGPDPDLAAMLERDVLETSPGVRWDDVAGLS
Sbjct: 186 GS--SKSNTDKADSANGDAEDGKSKRAQYEGPDPDLAAMLERDVLETSPGVRWDDVAGLS 243
Query: 870 EAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSS 1049
EAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSS
Sbjct: 244 EAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSS 303
Query: 1050 ATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSELLV 1229
ATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCN+RGASGEHESSRRVKSELLV
Sbjct: 304 ATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLV 363
Query: 1230 QVDGVNNSSTGDDGARKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRIN 1409
QVDGVNNSSTG+DG+RKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRIN
Sbjct: 364 QVDGVNNSSTGEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRIN 423
Query: 1410 LKTVEVAGDVNIDAVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKSMSKEDIA 1589
LKTVEVA DVNID VARRT+GYSGDDLTNVCRDASLNGMRRKIAGKTRDEIK+M K++I+
Sbjct: 424 LKTVEVAPDVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMPKDEIS 483
Query: 1590 KDPIAMCDFEEALTKVQRSVSPADIERHEKWFSEFGSA 1703
DP+AMCDFEEA+TKVQRSVS ADIERHEKWFSEFGSA
Sbjct: 484 NDPVAMCDFEEAITKVQRSVSQADIERHEKWFSEFGSA 521
>gb|ABK96572.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 525
Score = 865 bits (2236), Expect = 0.0
Identities = 439/519 (84%), Positives = 470/519 (90%), Gaps = 3/519 (0%)
Frame = +3
Query: 156 QDHLKLARDYANEGLYDTSIIFFDGAIAQINKHLSTLDDPLIRSKWMNCKKALSDEIDIV 335
QDHLKLAR+YA EGLYDTSIIFFDGAIAQINKHL+TLDDPLIR+KWMN KK+LS+E +IV
Sbjct: 17 QDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLTTLDDPLIRTKWMNLKKSLSEETEIV 76
Query: 336 KQLDAERRALKEALGNRRPPSPPIPTKSSFVFQPLDEYPTSSGAGTPIDDPDVWAPPNRD 515
KQLDAERRA KEA RR SPPI KSSFVFQPLDEYPTSS A PIDDPDVW PP+RD
Sbjct: 77 KQLDAERRAFKEAPAARRVASPPIHAKSSFVFQPLDEYPTSSAA--PIDDPDVWRPPSRD 134
Query: 516 NGSRRPTRAGQMGIRKSPQDATWARGAASKAAPTGRGAKT---NRSTSGPRASTASAAGK 686
SRRPTRA Q+G+RKSPQD WARGA+++ TGRGAKT +R SG RAST GK
Sbjct: 135 TTSRRPTRASQVGLRKSPQDGAWARGASTRTGTTGRGAKTAASSRVNSGVRASTT---GK 191
Query: 687 RGSGANKSNSTKSDSGNGEAEDGKTKRLQYEGPDPDLAAMLERDVLETSPGVRWDDVAGL 866
+G+G S + D+ NG+AEDGK +R QYEGPDPDLA MLERDVLET+PGVRWDDVAGL
Sbjct: 192 KGTG----KSGRGDTANGDAEDGK-RRPQYEGPDPDLAEMLERDVLETTPGVRWDDVAGL 246
Query: 867 SEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVS 1046
SEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVS
Sbjct: 247 SEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVS 306
Query: 1047 SATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSELL 1226
SATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCN+RGASGEHESSRRVKSELL
Sbjct: 307 SATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELL 366
Query: 1227 VQVDGVNNSSTGDDGARKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRI 1406
VQVDGVNNSSTG+DG+RKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRI
Sbjct: 367 VQVDGVNNSSTGEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRI 426
Query: 1407 NLKTVEVAGDVNIDAVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKSMSKEDI 1586
NLKTVEV+ DVNID VARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIK+M K++I
Sbjct: 427 NLKTVEVSTDVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMPKDEI 486
Query: 1587 AKDPIAMCDFEEALTKVQRSVSPADIERHEKWFSEFGSA 1703
+ DP+AMCDFEEAL KVQRSVSP+DIE+HEKWFSEFGSA
Sbjct: 487 SNDPVAMCDFEEALRKVQRSVSPSDIEKHEKWFSEFGSA 525
>ref|XP_004135829.1| PREDICTED: katanin p60 ATPase-containing subunit A1-like [Cucumis
sativus] gi|449520561|ref|XP_004167302.1| PREDICTED:
katanin p60 ATPase-containing subunit A1-like [Cucumis
sativus]
Length = 521
Score = 862 bits (2226), Expect = 0.0
Identities = 436/519 (84%), Positives = 472/519 (90%), Gaps = 3/519 (0%)
Frame = +3
Query: 156 QDHLKLARDYANEGLYDTSIIFFDGAIAQINKHLSTLDDPLIRSKWMNCKKALSDEIDIV 335
QDHLKLAR+YA EGLYDTSIIFFDG IAQINKHLST+DDPL+R+KWM KKALS+EI++V
Sbjct: 10 QDHLKLAREYALEGLYDTSIIFFDGVIAQINKHLSTVDDPLMRAKWMTVKKALSEEIEVV 69
Query: 336 KQLDAERRALKEALGNRRPPSPPIPTKSSFVFQPLDEYPTSSGAGTPIDDPDVWAPPNRD 515
KQLDAER+A KE RR SPPI KSSFVFQPLDEYPTSS P+DDPDVW PP+RD
Sbjct: 70 KQLDAERKAFKETPMGRRAASPPIHAKSSFVFQPLDEYPTSSAP--PMDDPDVWRPPSRD 127
Query: 516 NGSRRPTRAGQMGIRKSPQDATWARGAASKAAPTGRGAK---TNRSTSGPRASTASAAGK 686
+ SRRP RAGQ+G+RKSPQD WARG+ ++ T RGAK ++R+ SG RASTA GK
Sbjct: 128 SSSRRPARAGQVGMRKSPQDGAWARGSTTRPNTTARGAKAGGSSRANSGVRASTA---GK 184
Query: 687 RGSGANKSNSTKSDSGNGEAEDGKTKRLQYEGPDPDLAAMLERDVLETSPGVRWDDVAGL 866
+ SGA S+KSDS NG+ +DGK+K+ QYEGPDPDLAAMLERDVLETSPGVRWDDVAGL
Sbjct: 185 KSSGAT-GKSSKSDSANGD-DDGKSKKGQYEGPDPDLAAMLERDVLETSPGVRWDDVAGL 242
Query: 867 SEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVS 1046
SEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVS
Sbjct: 243 SEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVS 302
Query: 1047 SATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSELL 1226
SATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCN+RGASGEHESSRRVKSELL
Sbjct: 303 SATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELL 362
Query: 1227 VQVDGVNNSSTGDDGARKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRI 1406
VQVDGVNNSS+G+DG+RKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRI
Sbjct: 363 VQVDGVNNSSSGEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRI 422
Query: 1407 NLKTVEVAGDVNIDAVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKSMSKEDI 1586
NLKTVEVA DVNID VARRT+GYSGDDLTNVCRDASLNGMRRKIAGKTRDEI++M+K+DI
Sbjct: 423 NLKTVEVAPDVNIDDVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIRNMAKDDI 482
Query: 1587 AKDPIAMCDFEEALTKVQRSVSPADIERHEKWFSEFGSA 1703
+KDP+AMCDFEEAL KVQRSVS ADIERHEKWFSEFGSA
Sbjct: 483 SKDPVAMCDFEEALKKVQRSVSAADIERHEKWFSEFGSA 521
>gb|AAP83637.1| katanin [Gossypium hirsutum]
Length = 520
Score = 860 bits (2221), Expect = 0.0
Identities = 431/516 (83%), Positives = 463/516 (89%)
Frame = +3
Query: 156 QDHLKLARDYANEGLYDTSIIFFDGAIAQINKHLSTLDDPLIRSKWMNCKKALSDEIDIV 335
QDHLKLAR+YA EGLYDTSIIFFDGAIAQINKHL+TLDDPLIRSKWMN KKALS+E ++V
Sbjct: 10 QDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNTLDDPLIRSKWMNVKKALSEEAEVV 69
Query: 336 KQLDAERRALKEALGNRRPPSPPIPTKSSFVFQPLDEYPTSSGAGTPIDDPDVWAPPNRD 515
KQLDAERR+ KEA RRP SPPI KSSFVFQPLDEYPTSSGA P+DDPDVW PP+RD
Sbjct: 70 KQLDAERRSFKEAPNGRRPSSPPIHAKSSFVFQPLDEYPTSSGA--PMDDPDVWRPPSRD 127
Query: 516 NGSRRPTRAGQMGIRKSPQDATWARGAASKAAPTGRGAKTNRSTSGPRASTASAAGKRGS 695
+RRP R GQ G+RKSPQD RG+ AA TGRGAK S+ S GK+G+
Sbjct: 128 TSTRRPARGGQAGMRKSPQDGISGRGSTRTAA-TGRGAKAGASSRTNTGVRGSTTGKKGT 186
Query: 696 GANKSNSTKSDSGNGEAEDGKTKRLQYEGPDPDLAAMLERDVLETSPGVRWDDVAGLSEA 875
G+ K + K DS NG+AEDGK+KR QYEGPDPDLA MLERDVLET+PGVRWDDVAGL+EA
Sbjct: 187 GSGKPS--KGDSANGDAEDGKSKRSQYEGPDPDLAEMLERDVLETTPGVRWDDVAGLTEA 244
Query: 876 KRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSAT 1055
KRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSAT
Sbjct: 245 KRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSAT 304
Query: 1056 LASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSRRVKSELLVQV 1235
LASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCN+RGASGEHESSRRVKSELLVQV
Sbjct: 305 LASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQV 364
Query: 1236 DGVNNSSTGDDGARKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLK 1415
DGVNN+ T +DG+RKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLK
Sbjct: 365 DGVNNTGTNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLK 424
Query: 1416 TVEVAGDVNIDAVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKSMSKEDIAKD 1595
TVEVA DV+ID VARRT+GYSGDDLTNVCRDASLNGMRRKIAGKTRDEIK+MSK++I+KD
Sbjct: 425 TVEVAADVDIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMSKDEISKD 484
Query: 1596 PIAMCDFEEALTKVQRSVSPADIERHEKWFSEFGSA 1703
P+AMCDFEEAL KVQRSVS ADIE+HEKWFSEFGSA
Sbjct: 485 PVAMCDFEEALAKVQRSVSQADIEKHEKWFSEFGSA 520
>ref|XP_003531690.1| PREDICTED: katanin p60 ATPase-containing subunit-like isoform 1
[Glycine max]
Length = 533
Score = 858 bits (2216), Expect = 0.0
Identities = 432/526 (82%), Positives = 468/526 (88%), Gaps = 10/526 (1%)
Frame = +3
Query: 156 QDHLKLARDYANEGLYDTSIIFFDGAIAQINKHLSTLDDPLIRSKWMNCKKALSDEIDIV 335
Q+HLKLARDYA EGLYDTSIIFFDGA+AQINKHLST++DPLIR+KWMN KKALS+E ++V
Sbjct: 10 QEHLKLARDYALEGLYDTSIIFFDGALAQINKHLSTVEDPLIRAKWMNVKKALSEETEVV 69
Query: 336 KQLDAERRALKEALGNRRPPSPPIPTKSS--FVFQPLDEYPTSSGAGTPIDDPDVWAPPN 509
KQLDAERRA K+ RRP SPPI KSS FVFQPLDEYPTSS P+DDPDVW PP+
Sbjct: 70 KQLDAERRAFKDNPIGRRPSSPPISVKSSSSFVFQPLDEYPTSSSGPGPVDDPDVWRPPS 129
Query: 510 RDNGSRRPTRAGQMGIRKSPQDATWARGAASKAAPTGRGAK---TNRSTSGPRASTASAA 680
RD SRRP R GQ+G RKS QD WARGA ++ GRGAK T R SG RAST +
Sbjct: 130 RDTTSRRPARPGQVGARKSAQDGAWARGATARTGAAGRGAKAGATGRVNSGTRASTTT-- 187
Query: 681 GKRGSGANKSNSTKSDSG-----NGEAEDGKTKRLQYEGPDPDLAAMLERDVLETSPGVR 845
GK+G A+ ++K+D+ NG+AEDGK+K+LQYEGPDP+LAAMLERDVLETSPGVR
Sbjct: 188 GKKGGAASSGKASKTDTAAAAVTNGDAEDGKSKKLQYEGPDPELAAMLERDVLETSPGVR 247
Query: 846 WDDVAGLSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECG 1025
WDDVAGL+EAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECG
Sbjct: 248 WDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECG 307
Query: 1026 TTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSR 1205
TTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSR
Sbjct: 308 TTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGASGEHESSR 367
Query: 1206 RVKSELLVQVDGVNNSSTGDDGARKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFES 1385
RVKSELLVQVDGV+NS+T +DG+RKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFES
Sbjct: 368 RVKSELLVQVDGVSNSATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFES 427
Query: 1386 RKELIRINLKTVEVAGDVNIDAVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIK 1565
RKELIRINLKTVEVA DVNID VARRT+GYSGDDLTNVCRDASLNGMRRKIAGKTRDEIK
Sbjct: 428 RKELIRINLKTVEVAPDVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIK 487
Query: 1566 SMSKEDIAKDPIAMCDFEEALTKVQRSVSPADIERHEKWFSEFGSA 1703
+MSK+DI+KDP+A CDFEEAL KVQRSVS ADIERHEKWF+EFGSA
Sbjct: 488 NMSKDDISKDPVAKCDFEEALRKVQRSVSQADIERHEKWFTEFGSA 533