BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018363
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi...   235   2e-60
emb|CBI17752.3| unnamed protein product [Vitis vinifera]              235   2e-60
ref|XP_002513116.1| pentatricopeptide repeat-containing protein,...   214   8e-54
ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containi...   210   1e-52
ref|XP_002459421.1| hypothetical protein SORBIDRAFT_02g004410 [S...   209   2e-52

>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            [Vitis vinifera]
          Length = 1294

 Score =  235 bits (600), Expect = 2e-60
 Identities = 114/157 (72%), Positives = 134/157 (85%)
 Frame = +2

Query: 2    DFKPDSSTYSNVIPCLVDVGDVKAACSCYNTMKGNSWLPTVSAYCSLVYGLCKMGEIDAA 181
            +FKPDSSTYSN I C V+VGDV+ AC+CYN +     LP+V+AY SLV GLCK  EIDAA
Sbjct: 1035 NFKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAA 1094

Query: 182  VTLVRDCLGNVTSGPMEFKYTLTILHTCKSSDAEKVIDVVDEMVQQGCPPNVLIYSAVIS 361
            + LVRDCL NVTSGPMEFKYTLTILH CKS +AEKVIDV++EM+Q+GC P+ + YSA+IS
Sbjct: 1095 IMLVRDCLANVTSGPMEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALIS 1154

Query: 362  GMCNHGTLEEARKVFARMRDRKLLTEANLIVYDELLI 472
            GMC HGTLEEARKVF+ MR+RKLLTEAN+IVYDE+LI
Sbjct: 1155 GMCKHGTLEEARKVFSNMRERKLLTEANVIVYDEILI 1191



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
 Frame = +2

Query: 11   PDSSTYSNVIPCLVDVGDVKAACSCYNTMKGNSWLPTVSAYCSLVYGLCKMGEIDAAVTL 190
            P    +  +I   +D          Y  MK     P V  Y  ++ GL K G +D A+++
Sbjct: 724  PSEKQFEILIRMHIDANRGLRVYYVYEKMKKFGIKPRVFLYNRIMDGLVKTGHLDLAMSV 783

Query: 191  VRDCLGNVTSGPMEFKYTLTIL--HTCKSSDAEKVIDVVDEMVQQGCPPNVLIYSAVISG 364
              D   +   G +E   T  IL    CK+   ++V++V +EM +    P+V+ Y+ +++ 
Sbjct: 784  YEDFKED---GLVEESVTYMILVKGLCKAGRIDEVLEVWEEMRKDKVEPDVMAYTTLVAA 840

Query: 365  MCNHGTLEEARKVFARMRDRKLLTE 439
            +CN   + E  ++F  M+ +K L +
Sbjct: 841  LCNGNRVGEGFELFKEMKQKKYLID 865


>emb|CBI17752.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  235 bits (600), Expect = 2e-60
 Identities = 114/157 (72%), Positives = 134/157 (85%)
 Frame = +2

Query: 2    DFKPDSSTYSNVIPCLVDVGDVKAACSCYNTMKGNSWLPTVSAYCSLVYGLCKMGEIDAA 181
            +FKPDSSTYSN I C V+VGDV+ AC+CYN +     LP+V+AY SLV GLCK  EIDAA
Sbjct: 531  NFKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAA 590

Query: 182  VTLVRDCLGNVTSGPMEFKYTLTILHTCKSSDAEKVIDVVDEMVQQGCPPNVLIYSAVIS 361
            + LVRDCL NVTSGPMEFKYTLTILH CKS +AEKVIDV++EM+Q+GC P+ + YSA+IS
Sbjct: 591  IMLVRDCLANVTSGPMEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALIS 650

Query: 362  GMCNHGTLEEARKVFARMRDRKLLTEANLIVYDELLI 472
            GMC HGTLEEARKVF+ MR+RKLLTEAN+IVYDE+LI
Sbjct: 651  GMCKHGTLEEARKVFSNMRERKLLTEANVIVYDEILI 687



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/144 (27%), Positives = 68/144 (47%)
 Frame = +2

Query: 8   KPDSSTYSNVIPCLVDVGDVKAACSCYNTMKGNSWLPTVSAYCSLVYGLCKMGEIDAAVT 187
           KP    Y+ ++  LV  G +  A S Y   K +  +     Y  LV GLCK G ID  + 
Sbjct: 219 KPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVLE 278

Query: 188 LVRDCLGNVTSGPMEFKYTLTILHTCKSSDAEKVIDVVDEMVQQGCPPNVLIYSAVISGM 367
           L+    GN+   P  F YT  +       + +  + V +EM +    P+V+ Y+ +++ +
Sbjct: 279 LLDRMRGNLCK-PDVFAYTAMVKVLVAEGNLDGCLRVWEEMRKDKVEPDVMAYTTLVAAL 337

Query: 368 CNHGTLEEARKVFARMRDRKLLTE 439
           CN   + E  ++F  M+ +K L +
Sbjct: 338 CNGNRVGEGFELFKEMKQKKYLID 361


>ref|XP_002513116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548127|gb|EEF49619.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1128

 Score =  214 bits (544), Expect = 8e-54
 Identities = 100/155 (64%), Positives = 125/155 (80%)
 Frame = +2

Query: 8    KPDSSTYSNVIPCLVDVGDVKAACSCYNTMKGNSWLPTVSAYCSLVYGLCKMGEIDAAVT 187
            +PDS+TYS  + C V+ G+++ AC C+N +   S +P+V+AYCSL  GLC +GEID A+ 
Sbjct: 940  EPDSNTYSIAVICFVEDGNIQEACVCHNKIIEMSSVPSVAAYCSLTKGLCDIGEIDEAMM 999

Query: 188  LVRDCLGNVTSGPMEFKYTLTILHTCKSSDAEKVIDVVDEMVQQGCPPNVLIYSAVISGM 367
            LVRDCLGNVTSGPMEFKYTLT+LH C+S DAEKVI+V++EM+ + CPPN +I SA+ISGM
Sbjct: 1000 LVRDCLGNVTSGPMEFKYTLTVLHVCRSGDAEKVIEVLNEMMHENCPPNEVILSAIISGM 1059

Query: 368  CNHGTLEEARKVFARMRDRKLLTEANLIVYDELLI 472
            C HGTLEEARKVF  +R+RKLLTEA  I YDE LI
Sbjct: 1060 CKHGTLEEARKVFTNLRERKLLTEAKTIFYDERLI 1094



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/134 (28%), Positives = 61/134 (45%)
 Frame = +2

Query: 14   DSSTYSNVIPCLVDVGDVKAACSCYNTMKGNSWLPTVSAYCSLVYGLCKMGEIDAAVTLV 193
            DS TY  +I  L   G +      +  MK +   P V AY ++V GLCK G +     L 
Sbjct: 698  DSVTYMILIKGLCKFGRIDEMMEVWEEMKRDGVNPDVMAYATVVTGLCKGGRVAEGYELF 757

Query: 194  RDCLGNVTSGPMEFKYTLTILHTCKSSDAEKVIDVVDEMVQQGCPPNVLIYSAVISGMCN 373
            ++   N         Y + I    K        D++  +V  G   ++ IY+++I G+CN
Sbjct: 758  KEMKENKVLIDRAI-YGVLIEAFVKDGKIGSACDLLQGLVDSGYRADLGIYNSLIEGLCN 816

Query: 374  HGTLEEARKVFARM 415
               +++ARK+F  M
Sbjct: 817  VKRVDKARKLFQIM 830


>ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            [Glycine max]
          Length = 733

 Score =  210 bits (534), Expect = 1e-52
 Identities = 97/155 (62%), Positives = 127/155 (81%)
 Frame = +2

Query: 8    KPDSSTYSNVIPCLVDVGDVKAACSCYNTMKGNSWLPTVSAYCSLVYGLCKMGEIDAAVT 187
            KPDS TY   I CLVD+G++K AC+C+N +   S +P+V+AY SL  GLC++GEID A+ 
Sbjct: 545  KPDSFTYCTAILCLVDLGEIKEACACHNRIIEMSCIPSVAAYSSLTKGLCQIGEIDEAML 604

Query: 188  LVRDCLGNVTSGPMEFKYTLTILHTCKSSDAEKVIDVVDEMVQQGCPPNVLIYSAVISGM 367
            LVRDCLGNV+ GP+EFKY+LTI+H CKS+ AEKVIDV++EM++QGC  + +IY ++ISGM
Sbjct: 605  LVRDCLGNVSDGPLEFKYSLTIIHACKSNVAEKVIDVLNEMIEQGCSLDNVIYCSIISGM 664

Query: 368  CNHGTLEEARKVFARMRDRKLLTEANLIVYDELLI 472
            C HGT+EEARKVF+ +R+R  LTE+N IVYDELLI
Sbjct: 665  CKHGTIEEARKVFSNLRERNFLTESNTIVYDELLI 699



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 39/154 (25%), Positives = 72/154 (46%)
 Frame = +2

Query: 8   KPDSSTYSNVIPCLVDVGDVKAACSCYNTMKGNSWLPTVSAYCSLVYGLCKMGEIDAAVT 187
           KP    Y+ V+  LV  G +  A S Y+ +K +  +     +  LV GLCK G ID  + 
Sbjct: 232 KPRVFLYNRVMDALVRTGHLDLALSVYDDLKEDGLVEESVTFMVLVKGLCKCGRIDEMLE 291

Query: 188 LVRDCLGNVTSGPMEFKYTLTILHTCKSSDAEKVIDVVDEMVQQGCPPNVLIYSAVISGM 367
           ++      +   P  F YT  +     + + +  + V +EM +    P+V  Y+ +I G+
Sbjct: 292 VLGRMRERLCK-PDVFAYTALVKILVPAGNLDACLRVWEEMKRDRVEPDVKAYATMIVGL 350

Query: 368 CNHGTLEEARKVFARMRDRKLLTEANLIVYDELL 469
              G ++E  ++F  M+ +  L +   ++Y  L+
Sbjct: 351 AKGGRVQEGYELFREMKGKGCLVDR--VIYGALV 382


>ref|XP_002459421.1| hypothetical protein SORBIDRAFT_02g004410 [Sorghum bicolor]
            gi|241922798|gb|EER95942.1| hypothetical protein
            SORBIDRAFT_02g004410 [Sorghum bicolor]
          Length = 735

 Score =  209 bits (532), Expect = 2e-52
 Identities = 93/156 (59%), Positives = 126/156 (80%)
 Frame = +2

Query: 2    DFKPDSSTYSNVIPCLVDVGDVKAACSCYNTMKGNSWLPTVSAYCSLVYGLCKMGEIDAA 181
            +FKPDS TYS++IPC +D G+V+ ACSCYNT+   +W+P++SAYC+LV GLCKMGEI+AA
Sbjct: 548  NFKPDSCTYSHMIPCFMDEGNVEEACSCYNTVMKENWIPSMSAYCALVKGLCKMGEINAA 607

Query: 182  VTLVRDCLGNVTSGPMEFKYTLTILHTCKSSDAEKVIDVVDEMVQQGCPPNVLIYSAVIS 361
            ++LV+DCLGNV +GP EFKYTLTIL  C+S   EKVI+VV+EM++ GC    ++YSA+I 
Sbjct: 608  ISLVKDCLGNVENGPTEFKYTLTILEACRSKSPEKVINVVNEMIEVGCSMEEIVYSAIIY 667

Query: 362  GMCNHGTLEEARKVFARMRDRKLLTEANLIVYDELL 469
            G C + +  EAR+VF  MRDR +L+EAN IVY+++L
Sbjct: 668  GFCKYASSTEARQVFTIMRDRNILSEANFIVYEDML 703



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/156 (25%), Positives = 68/156 (43%)
 Frame = +2

Query: 2   DFKPDSSTYSNVIPCLVDVGDVKAACSCYNTMKGNSWLPTVSAYCSLVYGLCKMGEIDAA 181
           D +P     + V+  L   G V+ A   ++ M      P    +  +V  L   G  D  
Sbjct: 233 DVQPQVHACNRVLGALAAAGHVEDALKLFDEMSEGGVQPIPVTFAIVVRALAHAGMTDRL 292

Query: 182 VTLVRDCLGNVTSGPMEFKYTLTILHTCKSSDAEKVIDVVDEMVQQGCPPNVLIYSAVIS 361
           + ++   + N    P  F YT  +    +    +  I V +EM + G  P+ + Y+ ++ 
Sbjct: 293 LEMIGR-MRNEVCRPDVFVYTALVKTMVRRGYMDGCIRVWEEMEKDGVEPDTMAYATMVG 351

Query: 362 GMCNHGTLEEARKVFARMRDRKLLTEANLIVYDELL 469
           G CN G +EEA ++F  MR + LL   +  VY  L+
Sbjct: 352 GFCNTGMVEEAAELFKEMRSKGLLVARS--VYASLI 385