BLASTX nr result

ID: Cimicifuga21_contig00018319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018319
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329352.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
ref|XP_002325692.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
emb|CBI36637.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002533395.1| ankyrin repeat-containing protein, putative ...    75   4e-12
ref|XP_002329388.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12

>ref|XP_002329352.1| predicted protein [Populus trichocarpa] gi|222870402|gb|EEF07533.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 54/115 (46%), Positives = 69/115 (60%), Gaps = 5/115 (4%)
 Frame = +1

Query: 1   ALIATVSFTAGITVPGGYISEGPNQGMAVLLKMRSFQAFVISPGGYISEGPKQVFSHFC- 177
           AL+ATV+F A  T+PGGY +E   QG+AVLLK  +F  FVIS    +      +F HFC 
Sbjct: 226 ALVATVTFAAAFTMPGGYKNE---QGIAVLLKNAAFVVFVISDAIAMLLSISALFMHFCW 282

Query: 178 ----TRRLLKQEDIIYQLSVATFCTLGAIFAMMVAFITGSYAVLANSERLSITVC 330
               TR  ++++      S  T C   AI AM++AFITGSYAVLA S  L+IT C
Sbjct: 283 APIGTRGQVEEDMKGNWTSTLTIC---AIPAMVIAFITGSYAVLAPSSWLAITTC 334


>ref|XP_002325692.1| predicted protein [Populus trichocarpa] gi|222862567|gb|EEF00074.1|
           predicted protein [Populus trichocarpa]
          Length = 147

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 55/115 (47%), Positives = 66/115 (57%), Gaps = 5/115 (4%)
 Frame = +1

Query: 1   ALIATVSFTAGITVPGGYISEGPNQGMAVLLKMRSFQAFVISPGGYISEGPKQVFSHFCT 180
           AL+ATV+F A  TVPGGY +E   QG  VL+K  +F  FVIS    +      +F HF  
Sbjct: 9   ALVATVTFAAAFTVPGGYKNE---QGTPVLVKNAAFAVFVISDATAMVLSTSALFLHFYW 65

Query: 181 RRLLKQ----EDIIYQLSVAT-FCTLGAIFAMMVAFITGSYAVLANSERLSITVC 330
             L K+    EDII   S  T   T  AI AM++ FITGSYAVLA S  L+IT C
Sbjct: 66  ALLGKRGQVDEDIIENFSHWTAVLTAYAILAMIIVFITGSYAVLAPSSWLAITTC 120


>emb|CBI36637.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 45/106 (42%), Positives = 59/106 (55%)
 Frame = +1

Query: 4   LIATVSFTAGITVPGGYISEGPNQGMAVLLKMRSFQAFVISPGGYISEGPKQVFSHFCTR 183
           L+ATVSF AG T+PGGY     + GMA+L K  +FQAFV+S    +      V  HFCT 
Sbjct: 378 LVATVSFAAGFTLPGGY---NDSDGMAILSKKAAFQAFVVSDSMALGLSVTAVLCHFCTA 434

Query: 184 RLLKQEDIIYQLSVATFCTLGAIFAMMVAFITGSYAVLANSERLSI 321
              K   +   L  A   T   + AM+VAF+TG YAVL +   ++I
Sbjct: 435 LSEKGLQLAVLLKFAYLLTKLGVGAMVVAFLTGLYAVLPHHSGIAI 480


>ref|XP_002533395.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223526769|gb|EEF28995.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 575

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 44/112 (39%), Positives = 70/112 (62%), Gaps = 2/112 (1%)
 Frame = +1

Query: 1   ALIATVSFTAGITVPGGYIS--EGPNQGMAVLLKMRSFQAFVISPGGYISEGPKQVFSHF 174
           AL+ATV+F A  T+PGGY S  +  +QG+A+L K  +F+AF+I+    +      +F HF
Sbjct: 437 ALVATVTFAAAFTLPGGYRSNDDEKDQGVAILGKNSAFKAFLITDAIAMVLSTSSLFIHF 496

Query: 175 CTRRLLKQEDIIYQLSVATFCTLGAIFAMMVAFITGSYAVLANSERLSITVC 330
                  ++  ++ +  A  C + AI AM+VAF+TG+YAVL+ S+ L+I+ C
Sbjct: 497 TLALHGYRQRFMWLMVYAFRCIVFAIEAMVVAFVTGTYAVLSPSQGLAISTC 548


>ref|XP_002329388.1| predicted protein [Populus trichocarpa] gi|222870438|gb|EEF07569.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 49/121 (40%), Positives = 67/121 (55%), Gaps = 11/121 (9%)
 Frame = +1

Query: 1   ALIATVSFTAGITVPGGYISE-GPNQGMAVLLKMRSFQAFVISPGGYISEGPKQVFSHFC 177
           ALIATV+F A  T+PGGY ++ GPN+G A+L+K  +F  FVIS    +      VF HF 
Sbjct: 63  ALIATVTFAAAFTLPGGYKNDQGPNEGTAILVKKAAFIVFVISDAMSMVLSILAVFIHFL 122

Query: 178 T----------RRLLKQEDIIYQLSVATFCTLGAIFAMMVAFITGSYAVLANSERLSITV 327
           T           + + +E I     VAT  T+  +  M++AFITG+ AVL  S  L+I  
Sbjct: 123 TAFIQGFKMEKNKEIDEETIEKLFEVATLLTMIGMGTMIIAFITGTCAVLEPSLGLAICT 182

Query: 328 C 330
           C
Sbjct: 183 C 183


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