BLASTX nr result

ID: Cimicifuga21_contig00018300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018300
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE56209.1| hypothetical protein OsJ_05182 [Oryza sativa Japo...    69   5e-10
gb|EEC72379.1| hypothetical protein OsI_05650 [Oryza sativa Indi...    69   5e-10
ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing fac...    67   2e-09
ref|NP_001045729.1| Os02g0122800 [Oryza sativa Japonica Group] g...    67   2e-09
ref|XP_002882078.1| hypothetical protein ARALYDRAFT_483824 [Arab...    67   2e-09

>gb|EEE56209.1| hypothetical protein OsJ_05182 [Oryza sativa Japonica Group]
          Length = 290

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = -1

Query: 110 KMRPVFCGSFDYDTRQSELDRLFSKFGRVERVDMKS 3
           KMRPVFCG+ DYD RQSE++RLFSK+GRVERVDMKS
Sbjct: 11  KMRPVFCGNLDYDARQSEIERLFSKYGRVERVDMKS 46


>gb|EEC72379.1| hypothetical protein OsI_05650 [Oryza sativa Indica Group]
          Length = 603

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = -1

Query: 110 KMRPVFCGSFDYDTRQSELDRLFSKFGRVERVDMKS 3
           KMRPVFCG+ DYD RQSE++RLFSK+GRVERVDMKS
Sbjct: 324 KMRPVFCGNLDYDARQSEIERLFSKYGRVERVDMKS 359


>ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Vitis
           vinifera]
          Length = 241

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 28/35 (80%), Positives = 35/35 (100%)
 Frame = -1

Query: 107 MRPVFCGSFDYDTRQSELDRLFSKFGRVERVDMKS 3
           MRP+FCG+F+Y+TRQS+L+RLFSK+GRVERVDMKS
Sbjct: 1   MRPIFCGNFEYETRQSDLERLFSKYGRVERVDMKS 35


>ref|NP_001045729.1| Os02g0122800 [Oryza sativa Japonica Group]
           gi|41053015|dbj|BAD07946.1| putative
           arginine/serine-rich splicing factor RSp41 [Oryza sativa
           Japonica Group] gi|113535260|dbj|BAF07643.1|
           Os02g0122800 [Oryza sativa Japonica Group]
           gi|215768223|dbj|BAH00452.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 279

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = -1

Query: 107 MRPVFCGSFDYDTRQSELDRLFSKFGRVERVDMKS 3
           MRPVFCG+ DYD RQSE++RLFSK+GRVERVDMKS
Sbjct: 1   MRPVFCGNLDYDARQSEIERLFSKYGRVERVDMKS 35


>ref|XP_002882078.1| hypothetical protein ARALYDRAFT_483824 [Arabidopsis lyrata subsp.
           lyrata] gi|297327917|gb|EFH58337.1| hypothetical protein
           ARALYDRAFT_483824 [Arabidopsis lyrata subsp. lyrata]
          Length = 250

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/35 (85%), Positives = 34/35 (97%)
 Frame = -1

Query: 107 MRPVFCGSFDYDTRQSELDRLFSKFGRVERVDMKS 3
           MRPVF G+FDYDTRQS+L+RLFSK+GRVERVDMKS
Sbjct: 1   MRPVFVGNFDYDTRQSDLERLFSKYGRVERVDMKS 35


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