BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018277
         (1207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_192809.1| FACT complex subunit SPT16 [Arabidopsis thalian...    98   5e-18
ref|XP_002874642.1| hypothetical protein ARALYDRAFT_911378 [Arab...    97   6e-18
ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [...    96   2e-17
ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...    94   5e-17
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]    94   5e-17

>ref|NP_192809.1| FACT complex subunit SPT16 [Arabidopsis thaliana]
           gi|75220257|sp|O82491.1|SPT16_ARATH RecName: Full=FACT
           complex subunit SPT16; AltName: Full=Facilitates
           chromatin transcription complex subunit SPT16
           gi|3600033|gb|AAC35521.1| contains similarity to the N
           terminal domain of the E1 protein (Pfam: E1_N.hmm,
           score: 12.36) [Arabidopsis thaliana]
           gi|7267769|emb|CAB81172.1| putative transcriptional
           regulator [Arabidopsis thaliana]
           gi|225898771|dbj|BAH30516.1| hypothetical protein
           [Arabidopsis thaliana] gi|332657519|gb|AEE82919.1| FACT
           complex subunit SPT16 [Arabidopsis thaliana]
          Length = 1074

 Score = 97.8 bits (242), Expect = 5e-18
 Identities = 78/266 (29%), Positives = 112/266 (42%), Gaps = 11/266 (4%)
 Frame = +3

Query: 81  AMNLKLFKKRLRCLYTNWSKHKQDLWGNTEVLLVSTXXXXXXXXXX--NRFYQWLLGYEF 254
           ++++K F  R R LY +W KH  DLWG+ + L ++T            +    WLLGYEF
Sbjct: 25  SIDVKNFISRARALYEHWKKHSADLWGSADALAIATPPASDDLRYLKSSALNIWLLGYEF 84

Query: 255 SDTIAIFTLKEIHFICNXXXXXXXXXXXXXXXIEAVDAQVILHEKGKGEDGVEIMDKVLS 434
            DTI +FT K+IHF+C+                E +   VI+H K KG+DG  +MD +  
Sbjct: 85  PDTIMVFTKKQIHFLCSRNKASLLEVVKKPAHDE-LKLDVIMHVKPKGDDGTGLMDAIFR 143

Query: 435 DLRVQYRLRYLSFLVSMSKNKYECDVENDNNNSRLIVGFVVGESPASRILWGSLTKKTRA 614
            +R                     D+   + N   +VG +  E+P  ++L     +   A
Sbjct: 144 AIR---------------------DLSRGDGNDSQVVGHIAREAPEGKLLETWTERLKNA 182

Query: 615 EFHTVDIKDGLGKFALLAKVEDD------HKEERLEKKVVEPVVWGFKREQDQREVDIYL 776
            F  VDI  GL     L  V+DD       K   L   V++ VV          E D+  
Sbjct: 183 NFQFVDITGGLSD---LFAVKDDTEVMSVKKAAYLAYSVMKNVVVPNLESAIDEEKDVTH 239

Query: 777 QALSKEEEEKI---HLAEVKKPDENL 845
            AL    E+ I     A VK   EN+
Sbjct: 240 SALMDLTEKAILEPTKASVKLKPENV 265


>ref|XP_002874642.1| hypothetical protein ARALYDRAFT_911378 [Arabidopsis lyrata subsp.
           lyrata] gi|297320479|gb|EFH50901.1| hypothetical protein
           ARALYDRAFT_911378 [Arabidopsis lyrata subsp. lyrata]
          Length = 1076

 Score = 97.4 bits (241), Expect = 6e-18
 Identities = 78/266 (29%), Positives = 112/266 (42%), Gaps = 11/266 (4%)
 Frame = +3

Query: 81  AMNLKLFKKRLRCLYTNWSKHKQDLWGNTEVLLVSTXXXXXXXXXX--NRFYQWLLGYEF 254
           ++++K F  R R LY +W KH  DLWG+ + L ++T            +    WLLGYEF
Sbjct: 25  SIDVKNFISRARALYEHWKKHSADLWGSADALAIATPPASDDLRYLKSSALNIWLLGYEF 84

Query: 255 SDTIAIFTLKEIHFICNXXXXXXXXXXXXXXXIEAVDAQVILHEKGKGEDGVEIMDKVLS 434
            DTI +FT K+IHF+C+                E +   VI+H K KG+DG  +MD +  
Sbjct: 85  PDTIMVFTSKQIHFLCSRNKASLLEVVKKAAHDE-LKVDVIMHVKPKGDDGTGLMDAIFL 143

Query: 435 DLRVQYRLRYLSFLVSMSKNKYECDVENDNNNSRLIVGFVVGESPASRILWGSLTKKTRA 614
            +R                     D+   + N   +VG +  E+P  ++L     +   A
Sbjct: 144 AIR---------------------DLSRGDGNDSQVVGHIAREAPEGKLLETWTERLKNA 182

Query: 615 EFHTVDIKDGLGKFALLAKVEDD------HKEERLEKKVVEPVVWGFKREQDQREVDIYL 776
            F  VDI  GL     L  V+DD       K   L   V++ VV          E D+  
Sbjct: 183 NFQFVDITGGLSD---LFAVKDDTEVMSVKKAAYLAYSVMKNVVVPNLESAIDEEKDVTH 239

Query: 777 QALSKEEEEKI---HLAEVKKPDENL 845
            AL    E+ I     A VK   EN+
Sbjct: 240 SALMDITEKAILEPTKASVKLKAENV 265


>ref|XP_004134563.1| PREDICTED: FACT complex subunit SPT16-like [Cucumis sativus]
          Length = 1073

 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 2/190 (1%)
 Frame = +3

Query: 84  MNLKLFKKRLRCLYTNWSKHKQDLWGNTEVLLVSTXXXXXXXXXX--NRFYQWLLGYEFS 257
           ++L  F  RL+ LY++W +HK D+W +++VL + T            +  + WL GYEF 
Sbjct: 25  IDLVNFSTRLKSLYSHWGEHKSDMWSSSDVLTIGTPPASEDLRYLKSSALHIWLFGYEFP 84

Query: 258 DTIAIFTLKEIHFICNXXXXXXXXXXXXXXXIEAVDAQVILHEKGKGEDGVEIMDKVLSD 437
           +T+ +FT K+IHF+C+                +AV A V++H K K +DG  +MD +   
Sbjct: 85  ETVIVFTKKQIHFLCS-QKKVSLLDVVKKSAFDAVGADVVMHVKAKNDDGSSLMDSIFRA 143

Query: 438 LRVQYRLRYLSFLVSMSKNKYECDVENDNNNSRLIVGFVVGESPASRILWGSLTKKTRAE 617
           +R Q +                  +EN       +VG++  E+P  ++L     K   A 
Sbjct: 144 IRAQSKAD---------------GMENP------VVGYIAREAPEGKLLETWSGKLKNAN 182

Query: 618 FHTVDIKDGL 647
           F  VDI +GL
Sbjct: 183 FELVDITNGL 192


>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
 Frame = +3

Query: 81  AMNLKLFKKRLRCLYTNWSKHKQDLWGNTEVLLVST--XXXXXXXXXXNRFYQWLLGYEF 254
           A+NL  F KRL+ LY++W +H  DLWG+++ L ++T            +    WLLGYEF
Sbjct: 24  AINLDNFTKRLKTLYSHWKEHSSDLWGSSDALAIATPPASDDLRYLKSSALNIWLLGYEF 83

Query: 255 SDTIAIFTLKEIHFICNXXXXXXXXXXXXXXXIEAVDAQVILHEKGKGEDGVEIMDKVLS 434
            +TI +F  K+IHF+C+                EAV  +V++H K K +DG  +MD +  
Sbjct: 84  PETIMVFMKKQIHFLCSQKKASLLEVVRKSAK-EAVGVEVVMHVKAKSDDGTGLMDAIFR 142

Query: 435 DLRVQYRLRYLSFLVSMSKNKYECDVENDNNNSRLIVGFVVGESPASRILWGSLTKKTRA 614
            +R                        N +++   +VG +  E+P  ++L     K   A
Sbjct: 143 AVRA-----------------------NSSSHDTPVVGHIGREAPEGKLLEMWTEKLKNA 179

Query: 615 EFHTVDIKDG 644
           +F   DI +G
Sbjct: 180 DFQLSDITNG 189


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
 Frame = +3

Query: 81  AMNLKLFKKRLRCLYTNWSKHKQDLWGNTEVLLVST--XXXXXXXXXXNRFYQWLLGYEF 254
           A+NL  F KRL+ LY++W +H  DLWG+++ L ++T            +    WLLGYEF
Sbjct: 24  AINLDNFTKRLKTLYSHWKEHSSDLWGSSDALAIATPPASDDLRYLKSSALNIWLLGYEF 83

Query: 255 SDTIAIFTLKEIHFICNXXXXXXXXXXXXXXXIEAVDAQVILHEKGKGEDGVEIMDKVLS 434
            +TI +F  K+IHF+C+                EAV  +V++H K K +DG  +MD +  
Sbjct: 84  PETIMVFMKKQIHFLCSQKKASLLEVVRKSAK-EAVGVEVVMHVKAKSDDGTGLMDAIFR 142

Query: 435 DLRVQYRLRYLSFLVSMSKNKYECDVENDNNNSRLIVGFVVGESPASRILWGSLTKKTRA 614
            +R                        N +++   +VG +  E+P  ++L     K   A
Sbjct: 143 AVRA-----------------------NSSSHDTPVVGHIGREAPEGKLLEMWTEKLKNA 179

Query: 615 EFHTVDIKDG 644
           +F   DI +G
Sbjct: 180 DFQLSDITNG 189