BLASTX nr result
ID: Cimicifuga21_contig00018273
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00018273
(2081 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g... 639 0.0
ref|XP_002301165.1| f-box family protein [Populus trichocarpa] g... 618 e-174
ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|22355... 617 e-174
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc... 615 e-173
ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vi... 614 e-173
>ref|XP_002327176.1| f-box family protein [Populus trichocarpa]
gi|222835491|gb|EEE73926.1| f-box family protein [Populus
trichocarpa]
Length = 534
Score = 639 bits (1648), Expect = 0.0
Identities = 335/540 (62%), Positives = 390/540 (72%), Gaps = 7/540 (1%)
Frame = -1
Query: 1946 MGQSSSTSA-PKRRESN--SSHRMTAAISPEENAIIIGGDKSTAAISP---EEQAIVIGG 1785
MGQS+ST+ RR+SN SSHR + K T I P EEQ I
Sbjct: 1 MGQSASTALITSRRDSNRSSSHRSKS--------------KFTVPIMPVQVEEQTEFIFC 46
Query: 1784 ENRDYISDLPDECLASIFYSLGSGDRKRCSLVCRRWLLVEGQSRHRLSLDARSDLTSSIP 1605
E DYISDLPDECLA IF SL SGDRK CSLVCRRWL +EGQSRHRLSL+A+SDL +P
Sbjct: 47 EGPDYISDLPDECLACIFQSLNSGDRKHCSLVCRRWLRIEGQSRHRLSLNAQSDLLPLVP 106
Query: 1604 SLFNRFDSIRKLSLKCNRHSVSIGDDALILISLRCRNLIRLKLLACRELTDAGMEGFAMN 1425
LF+RFDS+ KL+LKC+R S SIGD+AL+ IS RCRNL RLKL +CRELTDAGM FA N
Sbjct: 107 FLFSRFDSVTKLALKCDRRSTSIGDEALVAISSRCRNLTRLKLRSCRELTDAGMAAFAKN 166
Query: 1424 CKGLKKLSVRSCNFGTRGMNVVLDQCSALEELSVKRLRGIADGAPAHPIGPGVAAASLKS 1245
CK LKKLS SC FG RGMN +LD C++LEELS+KRLRGI DGA A P+GPG+AAASLK+
Sbjct: 167 CKALKKLSCGSCTFGARGMNAILDNCASLEELSLKRLRGITDGAAAEPVGPGLAAASLKT 226
Query: 1244 ICLEELYNGQCFGPLIGGAKNLRTLNVIRCSGDWDALLESISSQVTGLVEVHLERLQVTD 1065
ICL+ELYNGQCFGPLI G+KNL+TL + RCSGDWD LL+ IS +VTG+VE+HLERLQV+D
Sbjct: 227 ICLKELYNGQCFGPLIIGSKNLKTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSD 286
Query: 1064 RGIAAISNCLNLEILHLVKTPECTDAALVSIADRCKLLRKLHIDGWKTNQLGDIGLIAIV 885
G+AAISNCLNLEILHLVKTPECTD LVSIA+RC+LLRKLH+DGWKTN++GD GL A+
Sbjct: 287 TGLAAISNCLNLEILHLVKTPECTDTGLVSIAERCRLLRKLHVDGWKTNRIGDDGLSAVA 346
Query: 884 EHCPNLHELVLIGVNPTKASLGLL-GNCQKLERLALCGSVTIGDPEITCIATKCMALRKL 708
++CPNL ELVLIGVNPTK S+ LL NCQ LERLALCGS T+GD EI+CIA KC+AL+KL
Sbjct: 347 KYCPNLQELVLIGVNPTKISVELLASNCQNLERLALCGSDTVGDAEISCIAAKCVALKKL 406
Query: 707 CIKSCPISNRSMEVLVIGCPXXXXXXXXKCRSVTSDCVGSLRLLRQSLVVTFDSDATENL 528
CIKSCP+S+ ME L GCP KCR+VT +C LR R SL V D E+
Sbjct: 407 CIKSCPVSDHGMEALANGCPNLVKVKVKKCRAVTCECADWLRTKRGSLAVNLDCGEPEHQ 466
Query: 527 DASTSDGGPPEIGAEFPLLNNQNTGATDVXXXXXXXXXXXXPRISVLVRRNFTTCAFGRW 348
DAS SDGG E EF + NQ + R+ +L +N C F RW
Sbjct: 467 DASASDGGLLENVVEFHSVANQ-MPLPSIASSSTGRSTSFKSRLGLLSGKNLVACTFRRW 525
>ref|XP_002301165.1| f-box family protein [Populus trichocarpa]
gi|222842891|gb|EEE80438.1| f-box family protein [Populus
trichocarpa]
Length = 533
Score = 618 bits (1594), Expect = e-174
Identities = 323/538 (60%), Positives = 388/538 (72%), Gaps = 5/538 (0%)
Frame = -1
Query: 1946 MGQSSSTSA-PKRRESNSSHRMTAAISPEENAIIIGGDKSTAAISP---EEQAIVIGGEN 1779
MGQ++ST+ RR+SN S + + + K T I P EEQ + E
Sbjct: 1 MGQTTSTALITSRRDSNLSSQRSKS-------------KFTVPIIPMQVEEQTEYVLVEA 47
Query: 1778 RDYISDLPDECLASIFYSLGSGDRKRCSLVCRRWLLVEGQSRHRLSLDARSDLTSSIPSL 1599
DYISDLPDECLA IF SL SGDRK CSLVCRRWL +EGQSRHRLSL+A+SDL + SL
Sbjct: 48 PDYISDLPDECLACIFQSLSSGDRKSCSLVCRRWLRIEGQSRHRLSLNAQSDLLPFVTSL 107
Query: 1598 FNRFDSIRKLSLKCNRHSVSIGDDALILISLRCRNLIRLKLLACRELTDAGMEGFAMNCK 1419
F+RFD++ KL+LKC+R SVSIGD+AL+ IS+RCRNL RLKL ACRE+TDAGM FA NCK
Sbjct: 108 FSRFDAVTKLALKCDRRSVSIGDEALVAISIRCRNLTRLKLRACREITDAGMAAFAKNCK 167
Query: 1418 GLKKLSVRSCNFGTRGMNVVLDQCSALEELSVKRLRGIADGAPAHPIGPGVAAASLKSIC 1239
LKK S SC FG +GMN +LD C++LE+LSVKRLRGI DGA A PIGPG+AAASLK+IC
Sbjct: 168 ALKKFSCGSCAFGAKGMNAMLDNCASLEDLSVKRLRGITDGATAEPIGPGLAAASLKTIC 227
Query: 1238 LEELYNGQCFGPLIGGAKNLRTLNVIRCSGDWDALLESISSQVTGLVEVHLERLQVTDRG 1059
L+ELYNGQCFGPLI G+KNL+TL + RCSGDWD LL+ I+ +VTG+VE+HLERLQV+D G
Sbjct: 228 LKELYNGQCFGPLIIGSKNLKTLKLFRCSGDWDKLLQVIADRVTGMVEIHLERLQVSDTG 287
Query: 1058 IAAISNCLNLEILHLVKTPECTDAALVSIADRCKLLRKLHIDGWKTNQLGDIGLIAIVEH 879
+ AISNCLNLEILHLVKTPECTD LVSIA+RC+LLRKLHIDGWK +++GD GL+A+ ++
Sbjct: 288 LVAISNCLNLEILHLVKTPECTDIGLVSIAERCRLLRKLHIDGWKAHRIGDDGLMAVAKY 347
Query: 878 CPNLHELVLIGVNPTKASLGLL-GNCQKLERLALCGSVTIGDPEITCIATKCMALRKLCI 702
C NL ELVLIGVNPT+ SL LL NCQ LERLALCGS T+GD EI+CIA KC+AL+KLCI
Sbjct: 348 CLNLQELVLIGVNPTQISLELLASNCQNLERLALCGSDTVGDVEISCIAAKCVALKKLCI 407
Query: 701 KSCPISNRSMEVLVIGCPXXXXXXXXKCRSVTSDCVGSLRLLRQSLVVTFDSDATENLDA 522
KSCP+S+ +E L GCP KCR+VT +C LR+ R SL V DS E+ DA
Sbjct: 408 KSCPVSDHGLEALANGCPNLVKVKVKKCRAVTYECADLLRMKRGSLAVNLDSGEPEHQDA 467
Query: 521 STSDGGPPEIGAEFPLLNNQNTGATDVXXXXXXXXXXXXPRISVLVRRNFTTCAFGRW 348
S SDGG E EF + NQ + R + ++F C F W
Sbjct: 468 SASDGGVQENVDEFHPVPNQ-MPLPSIAPSSTGRSTSFKSRFGLWSGKSFAACTFRGW 524
>ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|223550866|gb|EEF52352.1|
skip-2, putative [Ricinus communis]
Length = 536
Score = 617 bits (1592), Expect = e-174
Identities = 324/537 (60%), Positives = 385/537 (71%), Gaps = 4/537 (0%)
Frame = -1
Query: 1946 MGQSSSTSAP-KRRES--NSSHRMTAAISPEENAIIIGGDKSTAAISPEEQAIVIGGENR 1776
MGQSSS++A RRES S + TA ISP + T + ++ ++I E+
Sbjct: 1 MGQSSSSTAILTRRESIYRSKSKSTALISPMQ----------TEEPNDKDDVVLIINESP 50
Query: 1775 DYISDLPDECLASIFYSLGSGDRKRCSLVCRRWLLVEGQSRHRLSLDARSDLTSSIPSLF 1596
DYISDLPDECLA IF SL DR+RCSLVCRRWL +EGQSRHRLSL A+SDL I +LF
Sbjct: 51 DYISDLPDECLACIFQSLSPSDRQRCSLVCRRWLRIEGQSRHRLSLHAQSDLLPVISALF 110
Query: 1595 NRFDSIRKLSLKCNRHSVSIGDDALILISLRCRNLIRLKLLACRELTDAGMEGFAMNCKG 1416
RFD++ KL+L+C+R S SIGD+AL ISLRCRNL RLKL +CR++TDAGM FA NCKG
Sbjct: 111 TRFDAVTKLALRCDRKSASIGDEALEAISLRCRNLTRLKLRSCRDVTDAGMAAFAKNCKG 170
Query: 1415 LKKLSVRSCNFGTRGMNVVLDQCSALEELSVKRLRGIADGAPAHPIGPGVAAASLKSICL 1236
LKKLS SC FG +GMN VLD C++LEELS+KRLRGI DGA A PIGPG+AA SLK+ICL
Sbjct: 171 LKKLSCGSCTFGAKGMNAVLDNCASLEELSIKRLRGITDGAAAEPIGPGLAANSLKTICL 230
Query: 1235 EELYNGQCFGPLIGGAKNLRTLNVIRCSGDWDALLESISSQVTGLVEVHLERLQVTDRGI 1056
+ELYNGQCFGPLI G+KNLRTL + RCSGDWD LL+ IS +VTG+VE+HLERLQV+D G+
Sbjct: 231 KELYNGQCFGPLIIGSKNLRTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSDVGL 290
Query: 1055 AAISNCLNLEILHLVKTPECTDAALVSIADRCKLLRKLHIDGWKTNQLGDIGLIAIVEHC 876
+AISNCL+LEILHLVKTPECT+ L SIA+RCKLLRKLHIDGWK N++GD GLIA+ ++C
Sbjct: 291 SAISNCLDLEILHLVKTPECTNLGLGSIAERCKLLRKLHIDGWKANRIGDDGLIAVAKNC 350
Query: 875 PNLHELVLIGVNPTKASLGLL-GNCQKLERLALCGSVTIGDPEITCIATKCMALRKLCIK 699
PNL ELVLIGVNPTK+SL +L NCQ LERLALCGS T+GD EI+CIA KC++L+KLCIK
Sbjct: 351 PNLQELVLIGVNPTKSSLEMLASNCQNLERLALCGSDTVGDAEISCIAAKCISLKKLCIK 410
Query: 698 SCPISNRSMEVLVIGCPXXXXXXXXKCRSVTSDCVGSLRLLRQSLVVTFDSDATENLDAS 519
SCP+S+ ME L GCP KCR VT + LR R SL V DS E+ DAS
Sbjct: 411 SCPVSDHGMEALASGCPNLVKVKVKKCRGVTCEGADWLRASRGSLAVNLDSGEHEHHDAS 470
Query: 518 TSDGGPPEIGAEFPLLNNQNTGATDVXXXXXXXXXXXXPRISVLVRRNFTTCAFGRW 348
SDGG E E P + R+ +L RN C RW
Sbjct: 471 ASDGGVQENAVEIPPGQIAAVVPSVASSSTAGRSTSFKSRLGLLSGRNLVACTLRRW 527
>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
gi|449515093|ref|XP_004164584.1| PREDICTED: F-box protein
At1g47056-like [Cucumis sativus]
Length = 535
Score = 615 bits (1587), Expect = e-173
Identities = 329/542 (60%), Positives = 386/542 (71%), Gaps = 9/542 (1%)
Frame = -1
Query: 1946 MGQSSSTSAP-KRRESNSSHRMTAAISPEENAIIIGGDKSTAAISP-------EEQAIVI 1791
MGQS+S++A RR+SN SHR KSTA ISP + Q I+
Sbjct: 1 MGQSASSAAILSRRDSNHSHRSKI--------------KSTALISPMHLDETDDVQEIIH 46
Query: 1790 GGENRDYISDLPDECLASIFYSLGSGDRKRCSLVCRRWLLVEGQSRHRLSLDARSDLTSS 1611
G D+ISDLPDECLA IF SL S DRK CSLVCRRW VEGQSRHRLSL A +DL+S
Sbjct: 47 GAS--DFISDLPDECLACIFQSLSSVDRKGCSLVCRRWFKVEGQSRHRLSLKAEADLSSM 104
Query: 1610 IPSLFNRFDSIRKLSLKCNRHSVSIGDDALILISLRCRNLIRLKLLACRELTDAGMEGFA 1431
IPSLF RFD++ KL+LKC+R S SI DD+LILISLRCRNL RLKL ACRELTD GM FA
Sbjct: 105 IPSLFTRFDAVTKLALKCDRRSTSIRDDSLILISLRCRNLTRLKLRACRELTDVGMAAFA 164
Query: 1430 MNCKGLKKLSVRSCNFGTRGMNVVLDQCSALEELSVKRLRGIADGAPAHPIGPGVAAASL 1251
NCKGLKKLS SC FG +GMN VLD CSALEELSVKRLRGI D A PIGPG+A +SL
Sbjct: 165 KNCKGLKKLSCGSCTFGAKGMNAVLDNCSALEELSVKRLRGITDST-AEPIGPGIAGSSL 223
Query: 1250 KSICLEELYNGQCFGPLIGGAKNLRTLNVIRCSGDWDALLESISSQVTGLVEVHLERLQV 1071
K+ICL++LYN QCFGPL+ GAK+LRTL + RCSGDWDALL I+ +VTGLVEVHLERLQV
Sbjct: 224 KTICLKDLYNAQCFGPLLIGAKSLRTLKLFRCSGDWDALLRVIADRVTGLVEVHLERLQV 283
Query: 1070 TDRGIAAISNCLNLEILHLVKTPECTDAALVSIADRCKLLRKLHIDGWKTNQLGDIGLIA 891
+D G++AISNCL+LEILHLVKTPECT+ +V++A+RCKLLRKLHIDGWK N++GD GL+A
Sbjct: 284 SDVGLSAISNCLDLEILHLVKTPECTNLGIVALAERCKLLRKLHIDGWKANRIGDEGLVA 343
Query: 890 IVEHCPNLHELVLIGVNPTKASLGLL-GNCQKLERLALCGSVTIGDPEITCIATKCMALR 714
+ +C NL ELVLIGVNPTK SL +L NC+ LERLALCGS T+GD EI+CIA KC+AL+
Sbjct: 344 VARNCSNLQELVLIGVNPTKVSLEILASNCRNLERLALCGSDTVGDSEISCIAAKCIALK 403
Query: 713 KLCIKSCPISNRSMEVLVIGCPXXXXXXXXKCRSVTSDCVGSLRLLRQSLVVTFDSDATE 534
KLCIKSCP+S++ ME L GCP KCR VT + SLRL R SL V DS E
Sbjct: 404 KLCIKSCPVSDQGMEALAEGCPNLVKVKVKKCRGVTPEGADSLRLSRGSLAVNLDSGEPE 463
Query: 533 NLDASTSDGGPPEIGAEFPLLNNQNTGATDVXXXXXXXXXXXXPRISVLVRRNFTTCAFG 354
+ DAS S+GG + +F + NQ T + R+ +L R C
Sbjct: 464 HPDASASEGGIQDNVVDFHPIPNQVVPPT-IASSSAGRSSSLKSRLGLLAGRGLVACTLR 522
Query: 353 RW 348
RW
Sbjct: 523 RW 524
>ref|XP_002284998.1| PREDICTED: F-box protein At1g47056 [Vitis vinifera]
Length = 541
Score = 614 bits (1584), Expect = e-173
Identities = 324/538 (60%), Positives = 387/538 (71%), Gaps = 5/538 (0%)
Frame = -1
Query: 1946 MGQSSSTSA----PKRRESNSSHRMTAAISPEENAIIIGGDKSTAAISPEEQAIVIGGEN 1779
MGQS+STSA RR SN HR + + ++ + + I E+
Sbjct: 1 MGQSASTSAISSGSSRRGSNHPHRSRSKSMVQIPSMQVEENVQFRQID----------ED 50
Query: 1778 RDYISDLPDECLASIFYSLGSGDRKRCSLVCRRWLLVEGQSRHRLSLDARSDLTSSIPSL 1599
DYISDLPDECLA IF SLGSGDRK+CSLVCRRWL +EGQ+RHRLSL+A SDL + +PSL
Sbjct: 51 LDYISDLPDECLACIFQSLGSGDRKQCSLVCRRWLRIEGQTRHRLSLNAHSDLLTVVPSL 110
Query: 1598 FNRFDSIRKLSLKCNRHSVSIGDDALILISLRCRNLIRLKLLACRELTDAGMEGFAMNCK 1419
F+RFD++ KL+LKC+R SVSIGDDALILISL CRNL RLKL ACRELTDAGM FA NCK
Sbjct: 111 FSRFDAVTKLALKCDRRSVSIGDDALILISLGCRNLTRLKLRACRELTDAGMGVFAKNCK 170
Query: 1418 GLKKLSVRSCNFGTRGMNVVLDQCSALEELSVKRLRGIADGAPAHPIGPGVAAASLKSIC 1239
GLKKLS SC FG +GM+ VLD CSALEELSVKRLRGI+DG+ IGPGVAA+SLK+IC
Sbjct: 171 GLKKLSCGSCTFGAKGMSAVLDNCSALEELSVKRLRGISDGSAVDQIGPGVAASSLKTIC 230
Query: 1238 LEELYNGQCFGPLIGGAKNLRTLNVIRCSGDWDALLESISSQVTGLVEVHLERLQVTDRG 1059
L+E YNGQCF PLI GAKNLRTL + RCSGD D LL+ ++++ T +VE+HLERLQV+D G
Sbjct: 231 LKEQYNGQCFWPLIIGAKNLRTLKLFRCSGDCDNLLQLVANRTTSMVEIHLERLQVSDLG 290
Query: 1058 IAAISNCLNLEILHLVKTPECTDAALVSIADRCKLLRKLHIDGWKTNQLGDIGLIAIVEH 879
+ AIS+ L+LEILHLVKT ECT+A LVS+A+RCKLLRKLHIDGWK N++GD GL A+ +
Sbjct: 291 LVAISHFLDLEILHLVKTSECTNAGLVSVAERCKLLRKLHIDGWKANRIGDEGLSAVAKC 350
Query: 878 CPNLHELVLIGVNPTKASLGLL-GNCQKLERLALCGSVTIGDPEITCIATKCMALRKLCI 702
CPNL ELVLIGVNPTK SL +L NCQ LERLALC S T+GD EI+CIA KC+AL+KLCI
Sbjct: 351 CPNLQELVLIGVNPTKLSLEMLAANCQNLERLALCASDTVGDAEISCIAAKCLALKKLCI 410
Query: 701 KSCPISNRSMEVLVIGCPXXXXXXXXKCRSVTSDCVGSLRLLRQSLVVTFDSDATENLDA 522
KSCP+S++ M L GCP KCR+VT + LR R+SL V D+ TE+ DA
Sbjct: 411 KSCPVSDQGMRALACGCPNLVKVKVKKCRAVTYEGADGLRASRESLAVNLDTGETEHQDA 470
Query: 521 STSDGGPPEIGAEFPLLNNQNTGATDVXXXXXXXXXXXXPRISVLVRRNFTTCAFGRW 348
S SDGG E E P L +QN GA ++ R+ +L RN RW
Sbjct: 471 SASDGGAQENAVELPPLASQN-GAANIASSSSGRSNSLKARLGLLTGRNLVASTLRRW 527