BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018270
         (846 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519303.1| conserved hypothetical protein [Ricinus comm...   200   3e-49
ref|XP_004149640.1| PREDICTED: mediator of RNA polymerase II tra...   197   2e-48
ref|XP_004168404.1| PREDICTED: mediator of RNA polymerase II tra...   195   1e-47
gb|AFK42947.1| unknown [Lotus japonicus]                              190   3e-46
ref|XP_002304917.1| predicted protein [Populus trichocarpa] gi|2...   188   1e-45

>ref|XP_002519303.1| conserved hypothetical protein [Ricinus communis]
           gi|223541618|gb|EEF43167.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 135

 Score =  200 bits (509), Expect = 3e-49
 Identities = 106/138 (76%), Positives = 116/138 (84%)
 Frame = -2

Query: 641 MDIISQLQEQVNTVASLAFNTFGTLQRDAPPVRLSPNYPEPPPVNSSENAADIAEQPKLM 462
           MDIISQLQEQV+T+ASLAFNT GTLQRDAPPVRLSPNYPEPP  N +E   DIA+QPKLM
Sbjct: 1   MDIISQLQEQVDTIASLAFNTIGTLQRDAPPVRLSPNYPEPPASNPAE---DIADQPKLM 57

Query: 461 SAALVKAAKQFDALVAALPVAEGGEEAQLRRIAELQAENDAVGXXXXXXXXXXXXXXKRV 282
           SAALVKAAKQFDALVAALP+AEGGEEAQL+RIAELQAENDAVG              K+V
Sbjct: 58  SAALVKAAKQFDALVAALPLAEGGEEAQLKRIAELQAENDAVGQELQRQLEAAEKELKQV 117

Query: 281 QELFNEAADNCLNMKKPD 228
           QELF++A DNCLN+KKPD
Sbjct: 118 QELFSQATDNCLNLKKPD 135


>ref|XP_004149640.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           21-like [Cucumis sativus]
          Length = 138

 Score =  197 bits (501), Expect = 2e-48
 Identities = 101/138 (73%), Positives = 113/138 (81%)
 Frame = -2

Query: 641 MDIISQLQEQVNTVASLAFNTFGTLQRDAPPVRLSPNYPEPPPVNSSENAADIAEQPKLM 462
           MDIISQLQEQVNT+A+LAFNTFGTLQRDAPPVRLSPNYPEPP    +E+ A IAEQPKLM
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSQEPTEDNATIAEQPKLM 60

Query: 461 SAALVKAAKQFDALVAALPVAEGGEEAQLRRIAELQAENDAVGXXXXXXXXXXXXXXKRV 282
           SAALVKAAKQFDALVAALP+++GGEE QL+RIAELQAEND VG               +V
Sbjct: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDVVGQELQKQLQAAEKELVQV 120

Query: 281 QELFNEAADNCLNMKKPD 228
           QELF++ ADNCLN+KK D
Sbjct: 121 QELFSQVADNCLNLKKAD 138


>ref|XP_004168404.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           21-like [Cucumis sativus]
          Length = 138

 Score =  195 bits (495), Expect = 1e-47
 Identities = 100/138 (72%), Positives = 112/138 (81%)
 Frame = -2

Query: 641 MDIISQLQEQVNTVASLAFNTFGTLQRDAPPVRLSPNYPEPPPVNSSENAADIAEQPKLM 462
           MDIISQLQEQVNT+A+LAFNTFGTLQRDAPPVRLSPNYPEPP    +E+ A IAEQPKLM
Sbjct: 1   MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSQEPTEDNATIAEQPKLM 60

Query: 461 SAALVKAAKQFDALVAALPVAEGGEEAQLRRIAELQAENDAVGXXXXXXXXXXXXXXKRV 282
           SAALVKAAKQFDALVAALP+++GGEE QL+RIAELQAEND VG               +V
Sbjct: 61  SAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQAENDVVGQELQKQLQAAEKELVQV 120

Query: 281 QELFNEAADNCLNMKKPD 228
           QELF++ ADNCLN+ K D
Sbjct: 121 QELFSQVADNCLNLMKAD 138


>gb|AFK42947.1| unknown [Lotus japonicus]
          Length = 139

 Score =  190 bits (483), Expect = 3e-46
 Identities = 97/138 (70%), Positives = 111/138 (80%)
 Frame = -2

Query: 641 MDIISQLQEQVNTVASLAFNTFGTLQRDAPPVRLSPNYPEPPPVNSSENAADIAEQPKLM 462
           MDIISQLQEQVN +A+LAFNT GTLQRDAPP R+SPNYPEPP    +E+ A  +EQPKLM
Sbjct: 1   MDIISQLQEQVNLIANLAFNTIGTLQRDAPPNRISPNYPEPP-AQPTEDGATFSEQPKLM 59

Query: 461 SAALVKAAKQFDALVAALPVAEGGEEAQLRRIAELQAENDAVGXXXXXXXXXXXXXXKRV 282
           S  LVKAAKQFDALVAALP+AEGGEEAQL+RIAELQAENDA+G               +V
Sbjct: 60  STGLVKAAKQFDALVAALPIAEGGEEAQLKRIAELQAENDAIGQELQKQLEAAEKELHQV 119

Query: 281 QELFNEAADNCLNMKKPD 228
           QELF++A+DNCLN+KKPD
Sbjct: 120 QELFSQASDNCLNLKKPD 137


>ref|XP_002304917.1| predicted protein [Populus trichocarpa] gi|222847881|gb|EEE85428.1|
           predicted protein [Populus trichocarpa]
          Length = 137

 Score =  188 bits (478), Expect = 1e-45
 Identities = 100/138 (72%), Positives = 108/138 (78%)
 Frame = -2

Query: 641 MDIISQLQEQVNTVASLAFNTFGTLQRDAPPVRLSPNYPEPPPVNSSENAADIAEQPKLM 462
           MDIISQLQEQVN +A L FNTFGTLQRDAP  RLS NYPEPPP N +E+AA   EQPK M
Sbjct: 1   MDIISQLQEQVNQIAGLTFNTFGTLQRDAPSARLSQNYPEPPP-NPTEDAASFPEQPKQM 59

Query: 461 SAALVKAAKQFDALVAALPVAEGGEEAQLRRIAELQAENDAVGXXXXXXXXXXXXXXKRV 282
           SAALVKAAKQFDALVAALP++EGGEEAQL+RIAELQAENDAVG              K V
Sbjct: 60  SAALVKAAKQFDALVAALPLSEGGEEAQLKRIAELQAENDAVGQELQRQLEAAERELKLV 119

Query: 281 QELFNEAADNCLNMKKPD 228
           QELF +  DNCLN+KKPD
Sbjct: 120 QELFGQTTDNCLNLKKPD 137