BLASTX nr result

ID: Cimicifuga21_contig00018268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018268
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD87770.1| SOL1 protein [Arabidopsis thaliana]                    60   1e-07
emb|CAD87766.1| SOL1 protein [Arabidopsis thaliana] gi|29561768|...    60   1e-07
ref|NP_974126.1| putative carboxypeptidase D [Arabidopsis thalia...    60   1e-07
emb|CAD87768.1| SOL1 protein [Arabidopsis thaliana]                    60   1e-07
ref|XP_002887382.1| predicted protein [Arabidopsis lyrata subsp....    59   4e-07

>emb|CAD87770.1| SOL1 protein [Arabidopsis thaliana]
          Length = 489

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/65 (44%), Positives = 40/65 (61%)
 Frame = -1

Query: 197 ARGGEEQISSLSDSVQHDGVVARSLFSEKQPSSSVNVAHGYMSNSELEKAMKRFVKRCSS 18
           ARGG        D       + R LF++++P+ S+ +  GYM+N +LEKAMK F KRCS 
Sbjct: 25  ARGGHSDHIHPGDGNYSFHGIVRHLFAQEEPTPSLELTRGYMTNDDLEKAMKDFTKRCSK 84

Query: 17  ISRMY 3
           ISR+Y
Sbjct: 85  ISRLY 89


>emb|CAD87766.1| SOL1 protein [Arabidopsis thaliana] gi|29561768|emb|CAD87767.1|
           SOL1 protein [Arabidopsis thaliana]
          Length = 499

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/65 (44%), Positives = 40/65 (61%)
 Frame = -1

Query: 197 ARGGEEQISSLSDSVQHDGVVARSLFSEKQPSSSVNVAHGYMSNSELEKAMKRFVKRCSS 18
           ARGG        D       + R LF++++P+ S+ +  GYM+N +LEKAMK F KRCS 
Sbjct: 25  ARGGHSDHIHPGDGNYSFHGIVRHLFAQEEPTPSLELTRGYMTNDDLEKAMKDFTKRCSK 84

Query: 17  ISRMY 3
           ISR+Y
Sbjct: 85  ISRLY 89


>ref|NP_974126.1| putative carboxypeptidase D [Arabidopsis thaliana]
           gi|7239496|gb|AAF43222.1|AC012654_6 Similar to the
           putative carboxypeptidase F26A9.4 gi|6682608 from A.
           thaliana on BAC gb|AC016163; It is a member of Zinc
           carboxypeptidase family PF|00246 [Arabidopsis thaliana]
           gi|29561772|emb|CAD87769.1| SOL1 protein [Arabidopsis
           thaliana] gi|332197098|gb|AEE35219.1| putative
           carboxypeptidase D [Arabidopsis thaliana]
          Length = 491

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/65 (44%), Positives = 40/65 (61%)
 Frame = -1

Query: 197 ARGGEEQISSLSDSVQHDGVVARSLFSEKQPSSSVNVAHGYMSNSELEKAMKRFVKRCSS 18
           ARGG        D       + R LF++++P+ S+ +  GYM+N +LEKAMK F KRCS 
Sbjct: 25  ARGGHSDHIHPGDGNYSFHGIVRHLFAQEEPTPSLELTRGYMTNDDLEKAMKDFTKRCSK 84

Query: 17  ISRMY 3
           ISR+Y
Sbjct: 85  ISRLY 89


>emb|CAD87768.1| SOL1 protein [Arabidopsis thaliana]
          Length = 90

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/65 (44%), Positives = 40/65 (61%)
 Frame = -1

Query: 197 ARGGEEQISSLSDSVQHDGVVARSLFSEKQPSSSVNVAHGYMSNSELEKAMKRFVKRCSS 18
           ARGG        D       + R LF++++P+ S+ +  GYM+N +LEKAMK F KRCS 
Sbjct: 25  ARGGHSDHIHPGDGNYSFHGIVRHLFAQEEPTPSLELTRGYMTNDDLEKAMKDFTKRCSK 84

Query: 17  ISRMY 3
           ISR+Y
Sbjct: 85  ISRLY 89


>ref|XP_002887382.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333223|gb|EFH63641.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 491

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/65 (44%), Positives = 39/65 (60%)
 Frame = -1

Query: 197 ARGGEEQISSLSDSVQHDGVVARSLFSEKQPSSSVNVAHGYMSNSELEKAMKRFVKRCSS 18
           ARGG        D        AR+LF++++   S+ +  GYM+N +LEKAMK F KRCS 
Sbjct: 25  ARGGHSDYIHPGDGNSSFHGTARNLFAQEETRPSLELTRGYMTNDDLEKAMKDFTKRCSK 84

Query: 17  ISRMY 3
           ISR+Y
Sbjct: 85  ISRLY 89


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