BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018238
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein o...    60   1e-07
ref|XP_002887646.1| chlorophyll A-B binding family protein [Arab...    56   3e-06
ref|NP_177783.1| putative chlorophyll a/b-binding protein [Arabi...    56   3e-06
ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycin...    55   8e-06

>ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
           chloroplastic [Vitis vinifera]
           gi|297745621|emb|CBI40786.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 38/90 (42%), Positives = 47/90 (52%)
 Frame = -3

Query: 272 TSGFLSADRAKVAGKEDDAKSSKLGEVGLGLGVSIAVLLAYTGLVGVLIFSAILFIVVKV 93
           +S F    R ++  K    KS  +       G   +    +  L GVLIFSAI F  VK 
Sbjct: 13  SSSFFGGYRHRLCSKISWPKSRNVNSTSTYSGCKAS----WQELAGVLIFSAIPFTAVKA 68

Query: 92  IANSSIGTGFQMRMMETKAAAIENSSKFKA 3
           IANS +G   Q RM E K AA++NSSKFKA
Sbjct: 69  IANSPLGESLQSRMEENKKAAVKNSSKFKA 98


>ref|XP_002887646.1| chlorophyll A-B binding family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297333487|gb|EFH63905.1| chlorophyll A-B
           binding family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 330

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/47 (59%), Positives = 34/47 (72%)
 Frame = -3

Query: 143 LVGVLIFSAILFIVVKVIANSSIGTGFQMRMMETKAAAIENSSKFKA 3
           L GVL+FSAI F  VK IANSS+G   + R+ E K  A+ENSS+FKA
Sbjct: 52  LAGVLVFSAIPFTAVKAIANSSLGESLRRRLEEKKKEAVENSSRFKA 98


>ref|NP_177783.1| putative chlorophyll a/b-binding protein [Arabidopsis thaliana]
           gi|12323973|gb|AAG51944.1|AC015450_5 putative
           chlorophyll A-B binding protein; 65434-67056
           [Arabidopsis thaliana] gi|332197739|gb|AEE35860.1|
           putative chlorophyll a/b-binding protein [Arabidopsis
           thaliana]
          Length = 327

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/47 (59%), Positives = 34/47 (72%)
 Frame = -3

Query: 143 LVGVLIFSAILFIVVKVIANSSIGTGFQMRMMETKAAAIENSSKFKA 3
           L GVL+FSAI F  VK IANSSIG   + R+ E K  A+ENSS+FK+
Sbjct: 49  LAGVLVFSAIPFTAVKAIANSSIGVSLRRRLEEKKKEAVENSSRFKS 95


>ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycine max]
           gi|255636882|gb|ACU18774.1| unknown [Glycine max]
          Length = 331

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/54 (51%), Positives = 35/54 (64%)
 Frame = -3

Query: 164 VLLAYTGLVGVLIFSAILFIVVKVIANSSIGTGFQMRMMETKAAAIENSSKFKA 3
           +  ++  L GVL+FSAI F  VK IANS +G   Q +M E K  A+ENSS FKA
Sbjct: 41  ITASWQELAGVLLFSAIPFTAVKAIANSPLGESLQRKMEERKTFAVENSSTFKA 94