BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018237
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003576379.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...    64   5e-08
emb|CBI16435.3| unnamed protein product [Vitis vinifera]               64   5e-08
ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-lik...    63   7e-08
gb|ADE77939.1| unknown [Picea sitchensis]                              63   7e-08
gb|ADE75679.1| unknown [Picea sitchensis]                              63   7e-08

>ref|XP_003576379.1| PREDICTED: DNA topoisomerase 6 subunit B-like [Brachypodium
           distachyon]
          Length = 688

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 30/106 (28%), Positives = 56/106 (52%)
 Frame = +3

Query: 312 VYLGIAFGGKTLDKGVHFYRFFETVPLRYEEGVDEETKRVFDQIKWKKYNVKSKRDRVGI 491
           V  G++ GGK + +G++ +RF   +PL +E+G D  T+    +I W  Y +  ++D++G+
Sbjct: 460 VEAGVSIGGKDVKQGLNIFRFANRIPLLFEQGADVITRTALKRINWSSYKINQQQDKIGV 519

Query: 492 FVKITTRGNVSERDKDDTRMLLEDSISECLDMIKEVMKMPPEELKA 629
           FV I    +     K   +  + D I+E    +K  +K    +LK+
Sbjct: 520 FVSIV---STKIPFKGTGKEYIGDDITEIASAVKSALKQCCLQLKS 562


>emb|CBI16435.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 14/123 (11%)
 Frame = +3

Query: 267 PKFAVTFTSGCYNVF------VYLGIAFGGKTLDKGVHFYRFFETVPLRYEEGVDEETKR 428
           P    T+ SG   VF      V  G++ GGK + +G++ +RF   +PL +E+G D  T+ 
Sbjct: 425 PDMVATY-SGSAQVFEGHPFMVEAGVSIGGKDVKQGLNIFRFANRIPLLFEQGADVVTRT 483

Query: 429 VFDQIKWKKYNVKSKRDRVGIFV-----KITTRGNVSERDKDDTRML---LEDSISECLD 584
              +I W  Y +   +D++G+FV     KI  +G   E   DD   +   ++ SI +C  
Sbjct: 484 ALKRINWNSYKINQAQDKIGVFVSIVSTKIPFKGTGKEYIGDDISEIASAVKSSIQQCCI 543

Query: 585 MIK 593
            +K
Sbjct: 544 QLK 546


>ref|XP_003543555.1| PREDICTED: DNA topoisomerase 6 subunit B-like isoform 1 [Glycine
           max]
          Length = 673

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
 Frame = +3

Query: 267 PKFAVTFTSGCYNVF------VYLGIAFGGKTLDKGVHFYRFFETVPLRYEEGVDEETKR 428
           P    T+ SG   VF      V  G++ GGK + +G++ +RF   +PL +E+G D  T+ 
Sbjct: 425 PDMVATY-SGSAQVFEGHPFIVEAGVSVGGKNVKQGLNIFRFANRIPLLFEQGADVVTRT 483

Query: 429 VFDQIKWKKYNVKSKRDRVGIFV-----KITTRGNVSERDKDDTRML---LEDSISECLD 584
              +I W  Y +   +D++G+FV     KI  +G   E   DD   +   ++ +I +C  
Sbjct: 484 AHKRINWSSYKINQMQDKIGVFVSIVSTKIPFKGTGKEYIGDDITEIASAVKYAIQQCCV 543

Query: 585 MIKE--VMKMPPEELKASNEDMRKF 653
            +K   V KM   E +    ++ ++
Sbjct: 544 QLKSKIVKKMHAREQQERKRNLSRY 568


>gb|ADE77939.1| unknown [Picea sitchensis]
          Length = 472

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
 Frame = +3

Query: 312 VYLGIAFGGKTLDKGVHFYRFFETVPLRYEEGVDEETKRVFDQIKWKKYNVKSKRDRVGI 491
           V  GI+ GGK + +G++ +RF   +PL +E+G D  T+    +I W  Y +   +D++G+
Sbjct: 244 VEAGISLGGKDVKQGINVFRFANRIPLLFEQGADVITRTAMKRINWNSYKINQTQDKIGV 303

Query: 492 FV-----KITTRGNVSERDKDDTRML---LEDSISECLDMIKE--VMKMPPEELKASNED 641
           FV     KI  +G   E   DD   +   ++ +I +C   +K   V K    E +    +
Sbjct: 304 FVSIVSTKIPFKGTGKEYIGDDITEIATSVKAAIQQCCVQLKSKIVRKQQARERQERKRN 363

Query: 642 MRKF 653
           + K+
Sbjct: 364 LTKY 367


>gb|ADE75679.1| unknown [Picea sitchensis]
          Length = 676

 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
 Frame = +3

Query: 312 VYLGIAFGGKTLDKGVHFYRFFETVPLRYEEGVDEETKRVFDQIKWKKYNVKSKRDRVGI 491
           V  GI+ GGK + +G++ +RF   +PL +E+G D  T+    +I W  Y +   +D++G+
Sbjct: 448 VEAGISLGGKDVKQGINVFRFANRIPLLFEQGADVITRTAMKRINWNSYKINQTQDKIGV 507

Query: 492 FV-----KITTRGNVSERDKDDTRML---LEDSISECLDMIKE--VMKMPPEELKASNED 641
           FV     KI  +G   E   DD   +   ++ +I +C   +K   V K    E +    +
Sbjct: 508 FVSIVSTKIPFKGTGKEYIGDDITEIATSVKAAIQQCCVQLKSKIVRKQQARERQERKRN 567

Query: 642 MRKF 653
           + K+
Sbjct: 568 LTKY 571