BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018228
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat...    92   4e-17
ref|XP_002307479.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat...    64   1e-08
emb|CBI15662.3| unnamed protein product [Vitis vinifera]               64   1e-08

>ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/79 (62%), Positives = 62/79 (78%)
 Frame = -3

Query: 238 LQGLQPNAFVGAKMVAMYASHGDIDSALFLFNRVAEPSSLLYNSMIRGFARIGYSEKTLG 59
           L+GLQP A VG+KMVA YAS GDIDS++ +FN + EPSSLL+NSMIR +AR G++E+T+ 
Sbjct: 98  LRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGIGEPSSLLFNSMIRAYARYGFAERTVA 157

Query: 58  MYFRMNSIGLRPDNFTFPF 2
            YF M+S G   D FTFPF
Sbjct: 158 TYFSMHSWGFTGDYFTFPF 176


>ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/82 (58%), Positives = 58/82 (70%), Gaps = 3/82 (3%)
 Frame = -3

Query: 238 LQGLQPNAFVGAKMVAMYASHGDIDSALFLFNRVAEPSSLLYNSMIRGFARIG---YSEK 68
           L GLQPNAF+ AKMVAMYAS GD+DSA+ +F+R+  PSSLLYNS+IR + R G       
Sbjct: 105 LHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLLYNSIIRAYTRHGXXXXXXX 164

Query: 67  TLGMYFRMNSIGLRPDNFTFPF 2
            L  Y RM+ +GL  DNFT PF
Sbjct: 165 XLEAYARMHFLGLLGDNFTLPF 186


>ref|XP_002307479.1| predicted protein [Populus trichocarpa] gi|222856928|gb|EEE94475.1|
           predicted protein [Populus trichocarpa]
          Length = 1026

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/76 (36%), Positives = 52/76 (68%)
 Frame = -3

Query: 235 QGLQPNAFVGAKMVAMYASHGDIDSALFLFNRVAEPSSLLYNSMIRGFARIGYSEKTLGM 56
           QGL  N +VG+ +V+MYA  G +++A  +F+ + E + +L+N+M+ G+ + GY+ + + +
Sbjct: 356 QGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMEL 415

Query: 55  YFRMNSIGLRPDNFTF 8
           +F M S G  PD+FT+
Sbjct: 416 FFNMKSCGFYPDDFTY 431


>ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1291

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/77 (42%), Positives = 44/77 (57%)
 Frame = -3

Query: 232 GLQPNAFVGAKMVAMYASHGDIDSALFLFNRVAEPSSLLYNSMIRGFARIGYSEKTLGMY 53
           GLQ ++ +  K   MY S   ID+A  +F  +  P S L+N MIRGFA  G    +L +Y
Sbjct: 747 GLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELY 806

Query: 52  FRMNSIGLRPDNFTFPF 2
            +M   GL+PD F FPF
Sbjct: 807 SKMMEKGLKPDKFAFPF 823



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/71 (39%), Positives = 44/71 (61%)
 Frame = -3

Query: 232  GLQPNAFVGAKMVAMYASHGDIDSALFLFNRVAEPSSLLYNSMIRGFARIGYSEKTLGMY 53
            G   + FV A +V MYA  GDI++A  +F+++A    + + SMI G+A  GY+ +TLG +
Sbjct: 848  GCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFF 907

Query: 52   FRMNSIGLRPD 20
              M S G+ P+
Sbjct: 908  DLMRSSGVIPN 918


>emb|CBI15662.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/75 (38%), Positives = 49/75 (65%)
 Frame = -3

Query: 232 GLQPNAFVGAKMVAMYASHGDIDSALFLFNRVAEPSSLLYNSMIRGFARIGYSEKTLGMY 53
           G+  + FV   ++ MY+  G I+ A  +F+++ E +++ +NS+I G+A  GYSE+ L MY
Sbjct: 262 GVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMY 321

Query: 52  FRMNSIGLRPDNFTF 8
           + M   G++ DNFTF
Sbjct: 322 YEMRDSGVKIDNFTF 336