BLASTX nr result

ID: Cimicifuga21_contig00018210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018210
         (932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315190.1| predicted protein [Populus trichocarpa] gi|1...   173   6e-41
ref|NP_196214.1| protein maternal effect embryo arrest 60 [Arabi...   171   2e-40
ref|XP_002871190.1| hypothetical protein ARALYDRAFT_487395 [Arab...   171   3e-40
ref|XP_003552627.1| PREDICTED: uncharacterized protein LOC100798...   170   4e-40
ref|XP_004138443.1| PREDICTED: uncharacterized protein LOC101208...   170   5e-40

>ref|XP_002315190.1| predicted protein [Populus trichocarpa] gi|118483550|gb|ABK93673.1|
           unknown [Populus trichocarpa]
           gi|222864230|gb|EEF01361.1| predicted protein [Populus
           trichocarpa]
          Length = 180

 Score =  173 bits (438), Expect = 6e-41
 Identities = 92/178 (51%), Positives = 116/178 (65%), Gaps = 8/178 (4%)
 Frame = +3

Query: 126 TSIYITALDSTVNVNSLFMLAVFIGLAWNPTDPNYSLV---DNPKCFPGPKVAEDXXXXX 296
           TSI+ITALD  VNVNSLF LAVFIGLAWNPTDP  +L+   D   C P PK+AED     
Sbjct: 3   TSIHITALDGIVNVNSLFTLAVFIGLAWNPTDPTNTLIGPNDPISCSPSPKIAEDLIAFH 62

Query: 297 XXXXXXXXXXXXXXXXXKQVLKISRSNGVDHDT-----SVMMARVNKTMLRVGILATSAG 461
                            KQ +++++++   H        +M+A VNK ++RVG+L +  G
Sbjct: 63  VYSFSSFLFSSLIALALKQAIRVAKTSNHTHGNYLEAAELMLAHVNKNLIRVGMLVSGIG 122

Query: 462 SVCGCGFLMFALINVVQFKLGTLSCPSKYSIAAIVPLVIFVPSALLIYVSLVLYAFTR 635
           SVCGC FLM AL+NVVQ KLG+L C + +  AA+VPLVI VP ALL+YVS+VLYAFTR
Sbjct: 123 SVCGCVFLMLALVNVVQLKLGSLGCGNGHIYAAVVPLVILVPVALLVYVSIVLYAFTR 180


>ref|NP_196214.1| protein maternal effect embryo arrest 60 [Arabidopsis thaliana]
           gi|10177568|dbj|BAB10800.1| unnamed protein product
           [Arabidopsis thaliana] gi|21554350|gb|AAM63457.1|
           unknown [Arabidopsis thaliana]
           gi|98960927|gb|ABF58947.1| At5g05950 [Arabidopsis
           thaliana] gi|110737481|dbj|BAF00683.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332003561|gb|AED90944.1| protein maternal effect
           embryo arrest 60 [Arabidopsis thaliana]
          Length = 175

 Score =  171 bits (433), Expect = 2e-40
 Identities = 94/173 (54%), Positives = 116/173 (67%), Gaps = 3/173 (1%)
 Frame = +3

Query: 126 TSIYITALDSTVNVNSLFMLAVFIGLAWNPTDPNYSLVDNPKCFPGPKVAEDXXXXXXXX 305
           TSI+ITALD  VNVNSLF LAVFIGLAWNPTDP+ SLV +P C P  ++AE+        
Sbjct: 3   TSIHITALDGIVNVNSLFTLAVFIGLAWNPTDPDNSLVTDPNCVPTARMAENLVAFHVYS 62

Query: 306 XXXXXXXXXXXXXXKQVLKISRSNGVDHDTSV--MMARVNKTMLRVGILATSAGSVCGCG 479
                         KQ ++++ ++     T +  ++  VNKT LR G++ +  GSVCGCG
Sbjct: 63  FASFLFSSLIALGLKQAMRLNIASSFHISTRIDPVVYYVNKTALRFGMVTSGLGSVCGCG 122

Query: 480 FLMFALINVVQFKLGTLSC-PSKYSIAAIVPLVIFVPSALLIYVSLVLYAFTR 635
           FLM ALINVVQ KLGTL C  S ++ AA+VPLVI VPSAL IYVSL+LYAFTR
Sbjct: 123 FLMLALINVVQIKLGTLGCGASGHTYAAVVPLVILVPSALFIYVSLMLYAFTR 175


>ref|XP_002871190.1| hypothetical protein ARALYDRAFT_487395 [Arabidopsis lyrata subsp.
           lyrata] gi|297317027|gb|EFH47449.1| hypothetical protein
           ARALYDRAFT_487395 [Arabidopsis lyrata subsp. lyrata]
          Length = 175

 Score =  171 bits (432), Expect = 3e-40
 Identities = 94/173 (54%), Positives = 116/173 (67%), Gaps = 3/173 (1%)
 Frame = +3

Query: 126 TSIYITALDSTVNVNSLFMLAVFIGLAWNPTDPNYSLVDNPKCFPGPKVAEDXXXXXXXX 305
           TSI+ITALD  VNVNSLF LAVFIGLAWNPTDP+ SLV +P C P  ++AE+        
Sbjct: 3   TSIHITALDGIVNVNSLFTLAVFIGLAWNPTDPDNSLVTDPNCVPTARMAENLVAFHVYS 62

Query: 306 XXXXXXXXXXXXXXKQVLKISRSNGVDHDTSV--MMARVNKTMLRVGILATSAGSVCGCG 479
                         KQ ++++ ++     T +  ++  VNKT LR G++ +  GSVCGCG
Sbjct: 63  FASFLFSSLIALGLKQAMRLNIASSFHISTRIDPVVYYVNKTALRFGMVISGLGSVCGCG 122

Query: 480 FLMFALINVVQFKLGTLSC-PSKYSIAAIVPLVIFVPSALLIYVSLVLYAFTR 635
           FLM ALINVVQ KLGTL C  S ++ AA+VPLVI VPSAL IYVSL+LYAFTR
Sbjct: 123 FLMLALINVVQIKLGTLGCGASGHTYAAVVPLVILVPSALFIYVSLMLYAFTR 175


>ref|XP_003552627.1| PREDICTED: uncharacterized protein LOC100798297 [Glycine max]
          Length = 180

 Score =  170 bits (431), Expect = 4e-40
 Identities = 90/172 (52%), Positives = 114/172 (66%), Gaps = 2/172 (1%)
 Frame = +3

Query: 126 TSIYITALDSTVNVNSLFMLAVFIGLAWNPTDPNYSLVDNPKCFPGPKVAEDXXXXXXXX 305
           TS++ITALD+ VNVNSLF LAVFIGL WNP DP+ SL  +P C P   +AE+        
Sbjct: 9   TSLHITALDAIVNVNSLFTLAVFIGLTWNPNDPSNSLNSDPACAPTAAIAENLIAFHVYS 68

Query: 306 XXXXXXXXXXXXXXKQVLKISRSNGVDHDTSV--MMARVNKTMLRVGILATSAGSVCGCG 479
                         KQ +++SR+    +   V  ++A VN+T LR+G+L +  GSV GC 
Sbjct: 69  FSSFLFSSLVALALKQAIRLSRTTSFHYPAVVDHLVADVNRTALRLGMLVSGVGSVAGCA 128

Query: 480 FLMFALINVVQFKLGTLSCPSKYSIAAIVPLVIFVPSALLIYVSLVLYAFTR 635
           FLM AL+NV Q KLGTL+C S ++ AA+VPL+IFVP ALLIYVSLVLYAFTR
Sbjct: 129 FLMLALVNVAQIKLGTLACGSSHTYAAVVPLLIFVPLALLIYVSLVLYAFTR 180


>ref|XP_004138443.1| PREDICTED: uncharacterized protein LOC101208865 [Cucumis sativus]
           gi|449495300|ref|XP_004159793.1| PREDICTED:
           uncharacterized protein LOC101224173 [Cucumis sativus]
          Length = 172

 Score =  170 bits (430), Expect = 5e-40
 Identities = 90/169 (53%), Positives = 111/169 (65%)
 Frame = +3

Query: 123 GTSIYITALDSTVNVNSLFMLAVFIGLAWNPTDPNYSLVDNPKCFPGPKVAEDXXXXXXX 302
           GTSI+I+ALD  VNVNS+F LAVF+GLAWNP DP  +L+ +P C  GP VA +       
Sbjct: 4   GTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSFHVY 63

Query: 303 XXXXXXXXXXXXXXXKQVLKISRSNGVDHDTSVMMARVNKTMLRVGILATSAGSVCGCGF 482
                          KQ ++I++S    H T   + RVNKT LR+G+L +  GSVCGCGF
Sbjct: 64  SFSSFLFSSLIALGLKQAIRIAKSPFY-HPTEFFI-RVNKTALRIGMLVSGIGSVCGCGF 121

Query: 483 LMFALINVVQFKLGTLSCPSKYSIAAIVPLVIFVPSALLIYVSLVLYAF 629
           LM ALINVVQ KLGTLSC S  + AA+VPLVI VP AL++Y+ LV YAF
Sbjct: 122 LMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALVVYICLVSYAF 170


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