BLASTX nr result
ID: Cimicifuga21_contig00018200
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00018200
(2271 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-li... 745 0.0
emb|CBI19949.3| unnamed protein product [Vitis vinifera] 738 0.0
ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|2235... 707 0.0
ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-li... 672 0.0
ref|XP_003541832.1| PREDICTED: small RNA degrading nuclease 5-li... 664 0.0
>ref|XP_002278571.1| PREDICTED: small RNA degrading nuclease 5-like [Vitis vinifera]
Length = 572
Score = 745 bits (1923), Expect = 0.0
Identities = 383/565 (67%), Positives = 450/565 (79%), Gaps = 2/565 (0%)
Frame = +2
Query: 89 KTGTNATTQDNNVGSTYFDVFGPDAKADAVFKPATSESVLNLQDVQGLVTWVLGEGCMPS 268
++ TNAT ST+FD++GP+AKA+ VFK ++S LNLQDVQGLVTWVL EG MPS
Sbjct: 16 ESATNATAS-----STFFDIYGPEAKAEVVFKTPDADSTLNLQDVQGLVTWVLAEGFMPS 70
Query: 269 WVFIKNKPLIQKVVLLYVPGLDAALYMAHTGLLAGLKEICGNPRAVLALSCVSDGMQTID 448
W+FIKNKPLI KVV+LYVPGLDAALYM+ + +L+GLKE CGNPRAVLALSCVSD MQTID
Sbjct: 71 WIFIKNKPLIPKVVMLYVPGLDAALYMSQSKILSGLKEFCGNPRAVLALSCVSDRMQTID 130
Query: 449 ALLTSRLKRKREESNSSVKRPDQTLEPA-CTSSPDKSSSTELMKDLPFPILYYTLTTKEM 625
ALLT +LKRKR E +S++K+ DQT E C+ + SSS E++KDLPFPI YYTLT KE+
Sbjct: 131 ALLTCKLKRKRNEVDSALKKHDQTSEQGGCSGGSNNSSSMEVLKDLPFPITYYTLTAKEL 190
Query: 626 EDNGYYNAQPDFVSTIPAPLGSSPYEMLALDCEMCVTINGLELTRXXXXXXXXXXXXXXX 805
EDNGY + QP FVST+PAP G YEMLALDCEMCVT G ELTR
Sbjct: 191 EDNGYCHDQPGFVSTLPAPSGCRLYEMLALDCEMCVTSEGFELTRISLVDIKGQVVLDKL 250
Query: 806 XXPSNDILDYNTRYSGITCEMLNGVTTTLKDIQEEFIKLVYKETVVVGHSLENDLLALKI 985
PSN I+DYNTRYSGITCEMLNGVTT LKD+QE+F+KLVYKET++VGHSLENDLLALKI
Sbjct: 251 VKPSNRIIDYNTRYSGITCEMLNGVTTGLKDVQEDFLKLVYKETILVGHSLENDLLALKI 310
Query: 986 SHNLVIDTAVLYKSPRGASYKTALRVLARKFLSREIQDSGNGHDSTEDXXXXXXXXXXKI 1165
SH+LVIDTAVLYK PRGASYKTALRVL R+FLSREIQ+S NGHDS ED KI
Sbjct: 311 SHDLVIDTAVLYKHPRGASYKTALRVLTRRFLSREIQESRNGHDSIEDARAAMELALLKI 370
Query: 1166 KHGPEFGTPPSTQSFMRKKLVTVLSECGKTCSFIDDVSLVKRYAAGSCNALPVTSDDEAL 1345
+HGPEFG+PP SFMRKKL+TVL++ GKT SFIDD+S+V+RY + + +A PV+SD EAL
Sbjct: 371 RHGPEFGSPP---SFMRKKLLTVLNDYGKTSSFIDDISIVRRYTSEASHAFPVSSDVEAL 427
Query: 1346 SXXXXXXXXXXINFIWTQFSELHSYYKRRAEDTEKLNANVAEMISLLTCKRKSTGKKGIR 1525
S ++F+WTQFSEL+SY+K++AEDT+KLNA +AEMISLLTC +KST KGI+
Sbjct: 428 SKAKKEVKNDKVHFVWTQFSELNSYFKKQAEDTDKLNAKLAEMISLLTCNKKSTTPKGIK 487
Query: 1526 SSMTSELKSILKRMDARIQSLYTTLPNNAMLIVCTGHGDTALVQRLRKMLQES-ETTMCR 1702
S+TSELK IL +D RI+SLY LP N MLI+CTGHGDTA+V RLRKML+E ETT+ R
Sbjct: 488 FSVTSELKDILTCIDTRIRSLYHELPANTMLIICTGHGDTAIVHRLRKMLREQIETTVSR 547
Query: 1703 EKLVKVLEELQAQAEVALCFVGVKN 1777
EKLVKVLEELQAQAEVALCFVGVK+
Sbjct: 548 EKLVKVLEELQAQAEVALCFVGVKH 572
>emb|CBI19949.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 738 bits (1906), Expect = 0.0
Identities = 381/565 (67%), Positives = 448/565 (79%), Gaps = 2/565 (0%)
Frame = +2
Query: 89 KTGTNATTQDNNVGSTYFDVFGPDAKADAVFKPATSESVLNLQDVQGLVTWVLGEGCMPS 268
++ TNAT ST+FD++GP+AKA+ VFK ++S LNLQDVQGLVTWVL EG MPS
Sbjct: 16 ESATNATAS-----STFFDIYGPEAKAEVVFKTPDADSTLNLQDVQGLVTWVLAEGFMPS 70
Query: 269 WVFIKNKPLIQKVVLLYVPGLDAALYMAHTGLLAGLKEICGNPRAVLALSCVSDGMQTID 448
W+FIKNKPLI KVV+LYVPGLDAALYM+ + +L+GLKE CGNPRAVLALSCVSD MQTID
Sbjct: 71 WIFIKNKPLIPKVVMLYVPGLDAALYMSQSKILSGLKEFCGNPRAVLALSCVSDRMQTID 130
Query: 449 ALLTSRLKRKREESNSSVKRPDQTLEPA-CTSSPDKSSSTELMKDLPFPILYYTLTTKEM 625
ALLT +LKRKR E +S++K+ DQT E C+ + SSS E++KDLPFPI YYTLT KE+
Sbjct: 131 ALLTCKLKRKRNEVDSALKKHDQTSEQGGCSGGSNNSSSMEVLKDLPFPITYYTLTAKEL 190
Query: 626 EDNGYYNAQPDFVSTIPAPLGSSPYEMLALDCEMCVTINGLELTRXXXXXXXXXXXXXXX 805
EDNGY + QP FVST+PAP G YEMLALDCEMCVT G ELTR
Sbjct: 191 EDNGYCHDQPGFVSTLPAPSGCRLYEMLALDCEMCVTSEGFELTRISLVDIKGQVVLDKL 250
Query: 806 XXPSNDILDYNTRYSGITCEMLNGVTTTLKDIQEEFIKLVYKETVVVGHSLENDLLALKI 985
PSN I+DYNTRYSGITCEMLNGVTT LKD+QE+F+KLVYKET++VGHSLENDLLALKI
Sbjct: 251 VKPSNRIIDYNTRYSGITCEMLNGVTTGLKDVQEDFLKLVYKETILVGHSLENDLLALKI 310
Query: 986 SHNLVIDTAVLYKSPRGASYKTALRVLARKFLSREIQDSGNGHDSTEDXXXXXXXXXXKI 1165
SH+LVIDTAVLYK PRGASYKTALRVL R+FLSREIQ+S NGHDS ED
Sbjct: 311 SHDLVIDTAVLYKHPRGASYKTALRVLTRRFLSREIQESRNGHDSIEDARAAMELALEVE 370
Query: 1166 KHGPEFGTPPSTQSFMRKKLVTVLSECGKTCSFIDDVSLVKRYAAGSCNALPVTSDDEAL 1345
K+GPEFG+PPS FMRKKL+TVL++ GKT SFIDD+S+V+RY + + +A PV+SD EAL
Sbjct: 371 KYGPEFGSPPS---FMRKKLLTVLNDYGKTSSFIDDISIVRRYTSEASHAFPVSSDVEAL 427
Query: 1346 SXXXXXXXXXXINFIWTQFSELHSYYKRRAEDTEKLNANVAEMISLLTCKRKSTGKKGIR 1525
S ++F+WTQFSEL+SY+K++AEDT+KLNA +AEMISLLTC +KST KGI+
Sbjct: 428 SKAKKEVKNDKVHFVWTQFSELNSYFKKQAEDTDKLNAKLAEMISLLTCNKKSTTPKGIK 487
Query: 1526 SSMTSELKSILKRMDARIQSLYTTLPNNAMLIVCTGHGDTALVQRLRKMLQES-ETTMCR 1702
S+TSELK IL +D RI+SLY LP N MLI+CTGHGDTA+V RLRKML+E ETT+ R
Sbjct: 488 FSVTSELKDILTCIDTRIRSLYHELPANTMLIICTGHGDTAIVHRLRKMLREQIETTVSR 547
Query: 1703 EKLVKVLEELQAQAEVALCFVGVKN 1777
EKLVKVLEELQAQAEVALCFVGVK+
Sbjct: 548 EKLVKVLEELQAQAEVALCFVGVKH 572
>ref|XP_002520248.1| rnase h, putative [Ricinus communis] gi|223540467|gb|EEF42034.1|
rnase h, putative [Ricinus communis]
Length = 572
Score = 707 bits (1826), Expect = 0.0
Identities = 358/575 (62%), Positives = 441/575 (76%), Gaps = 1/575 (0%)
Frame = +2
Query: 56 SRREKMSSLYKKTGTNATTQDNNVGSTYFDVFGPDAKADAVFKPATSESVLNLQDVQGLV 235
S + ++ ++ ++T NN+ + YFD++GP AKA+ VFK + LNL+DVQGLV
Sbjct: 7 SPKHEIQAVSSSKEDDSTDNCNNITNNYFDIYGPQAKAEIVFKMPEANQTLNLEDVQGLV 66
Query: 236 TWVLGEGCMPSWVFIKNKPLIQKVVLLYVPGLDAALYMAHTGLLAGLKEICGNPRAVLAL 415
TWVL EG MPSWVFIKNKPLI KV +L++PGLDA+LY++H+ LLA KE C NPRA+LAL
Sbjct: 67 TWVLAEGFMPSWVFIKNKPLIPKVAMLFIPGLDASLYLSHSKLLASFKEYCSNPRALLAL 126
Query: 416 SCVSDGMQTIDALLTSRLKRKREESNSSVKRPDQTLEPACTSSPDKSSSTELMKDLPFPI 595
SCVSD MQT+DALLT ++KRKR+ ++S ++ QT E SS ELMKDLPFP
Sbjct: 127 SCVSDVMQTVDALLTCKMKRKRDRADSFSRKSMQTSEQG------DLSSIELMKDLPFPP 180
Query: 596 LYYTLTTKEMEDNGYYNAQPDFVSTIPAPLGSSPYEMLALDCEMCVTINGLELTRXXXXX 775
YYTLTTK++E+N Y +QP FVST+PAP GSS Y+MLALDCEMC+T G ELTR
Sbjct: 181 TYYTLTTKQLEENDYPISQPGFVSTLPAPSGSSAYDMLALDCEMCITKEGFELTRVTVVD 240
Query: 776 XXXXXXXXXXXXPSNDILDYNTRYSGITCEMLNGVTTTLKDIQEEFIKLVYKETVVVGHS 955
PSN I+DYNTR+SGITCEMLNGV T+LKD+QE+F+KLV+KET+++GHS
Sbjct: 241 VKGQVVLDKLVKPSNPIIDYNTRFSGITCEMLNGVPTSLKDVQEDFLKLVHKETLLIGHS 300
Query: 956 LENDLLALKISHNLVIDTAVLYKSPRGASYKTALRVLARKFLSREIQDSGNGHDSTEDXX 1135
LENDL ALKISH LVIDTAVLYK PRG SYKTALRVLA+KFLSREIQ SG+GHDS ED
Sbjct: 301 LENDLSALKISHGLVIDTAVLYKHPRGGSYKTALRVLAKKFLSREIQQSGDGHDSIEDAR 360
Query: 1136 XXXXXXXXKIKHGPEFGTPPSTQSFMRKKLVTVLSECGKTCSFIDDVSLVKRYAAGSCNA 1315
KIK+GP+FG+PPS F+R+KL+T+LSE GK S IDDVS+VKRYA+ S +A
Sbjct: 361 AAMELALLKIKNGPDFGSPPS---FVRRKLLTILSESGKASSVIDDVSIVKRYASESSHA 417
Query: 1316 LPVTSDDEALSXXXXXXXXXXINFIWTQFSELHSYYKRRAEDTEKLNANVAEMISLLTCK 1495
PV+SDD+ALS ++F+WTQ SEL+SY+K++A+D K+NA +AEMISLLTC+
Sbjct: 418 FPVSSDDDALSKALKEVKNDRVHFVWTQLSELNSYFKKQADDEGKVNAKLAEMISLLTCQ 477
Query: 1496 RKSTGKKGIRSSMTSELKSILKRMDARIQSLYTTLPNNAMLIVCTGHGDTALVQRLRKML 1675
+KS KG+R SMTSELK IL RMDAR++ LY+ LP N MLI+CTGHGDTA+V+RLRK+L
Sbjct: 478 KKSANTKGVRCSMTSELKEILIRMDARVRCLYSALPTNTMLIICTGHGDTAIVRRLRKLL 537
Query: 1676 QE-SETTMCREKLVKVLEELQAQAEVALCFVGVKN 1777
E ET +CREK+VKVLEELQAQAEVALCFVGVKN
Sbjct: 538 TEKQETRICREKIVKVLEELQAQAEVALCFVGVKN 572
>ref|XP_003544731.1| PREDICTED: small RNA degrading nuclease 5-like [Glycine max]
Length = 567
Score = 672 bits (1733), Expect = 0.0
Identities = 341/548 (62%), Positives = 422/548 (77%), Gaps = 1/548 (0%)
Frame = +2
Query: 137 YFDVFGPDAKADAVFKPATSESVLNLQDVQGLVTWVLGEGCMPSWVFIKNKPLIQKVVLL 316
++D++GP+ KAD VF S LNL DVQGLVTWVLGEG MPSWVFIKNKPLI KVV+L
Sbjct: 29 FYDIYGPEGKADVVFNSPEDNSTLNLSDVQGLVTWVLGEGFMPSWVFIKNKPLIPKVVML 88
Query: 317 YVPGLDAALYMAHTGLLAGLKEICGNPRAVLALSCVSDGMQTIDALLTSRLKRKREESNS 496
YVPGLDAAL+++ + +L LK CG PRAVLALSCVSDGMQTIDALLT ++KRKR+E NS
Sbjct: 89 YVPGLDAALFLSQSKMLPRLKIFCGKPRAVLALSCVSDGMQTIDALLTCKMKRKRDE-NS 147
Query: 497 SVKRPDQTLEPACTSSPDKSSSTELMKDLPFPILYYTLTTKEMEDNGYYNAQPDFVSTIP 676
S+ R + A TS D S EL KD+PFP+ YYTLT KE+E+NGY +P F+ST+P
Sbjct: 148 SIMR-----KSALTSQQDSLSFKELTKDIPFPVTYYTLTEKELEENGYSVNKPGFLSTLP 202
Query: 677 APLGSSPYEMLALDCEMCVTINGLELTRXXXXXXXXXXXXXXXXXPSNDILDYNTRYSGI 856
AP GS Y+MLALDCEMC+T G EL+R PSN I DYNTRYSGI
Sbjct: 203 APSGSPFYDMLALDCEMCITSEGFELSRITLVDVKGQVLIDKLVKPSNAITDYNTRYSGI 262
Query: 857 TCEMLNGVTTTLKDIQEEFIKLVYKETVVVGHSLENDLLALKISHNLVIDTAVLYKSPRG 1036
T EML+GVTT+L+DIQEEF+KLV+KET++VGHSLENDLLALKISH+LVIDTAVLYK PRG
Sbjct: 263 TSEMLDGVTTSLRDIQEEFLKLVHKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRG 322
Query: 1037 ASYKTALRVLARKFLSREIQDSGNGHDSTEDXXXXXXXXXXKIKHGPEFGTPPSTQSFMR 1216
+++K ALR L ++FLSREIQ SGNGHDS ED KI++GP FG+PPS F R
Sbjct: 323 STHKNALRFLTKRFLSREIQQSGNGHDSIEDARATMELALLKIRNGPNFGSPPS---FTR 379
Query: 1217 KKLVTVLSECGKTCSFIDDVSLVKRYAAGSCNALPVTSDDEALSXXXXXXXXXXINFIWT 1396
KKL+++LSE GKT S IDD+S+VKRYA+ S +A+PVTSDD AL+ ++FIWT
Sbjct: 380 KKLLSILSESGKTSSLIDDISVVKRYASESSHAIPVTSDDVALAKANKEVKNGKVHFIWT 439
Query: 1397 QFSELHSYYKRRAEDTEKLNANVAEMISLLTCKRKSTGKKGIRSSMTSELKSILKRMDAR 1576
QFSELHSY K++AED+E+LN +AEM++L TC+ T K + ++ELK IL RMDAR
Sbjct: 440 QFSELHSYLKKQAEDSERLNRRLAEMLALQTCQNNFTKGKDFKLKASAELKEILARMDAR 499
Query: 1577 IQSLYTTLPNNAMLIVCTGHGDTALVQRLRKML-QESETTMCREKLVKVLEELQAQAEVA 1753
I +LY +LP NAM+I+CTGHGDTA+V+RLRKML +++E+ +CREK+V++LEE+QA+AEVA
Sbjct: 500 IHNLYLSLPTNAMMIICTGHGDTAIVRRLRKMLAEQNESNICREKIVEILEEVQARAEVA 559
Query: 1754 LCFVGVKN 1777
LCFVGVK+
Sbjct: 560 LCFVGVKH 567
>ref|XP_003541832.1| PREDICTED: small RNA degrading nuclease 5-like [Glycine max]
Length = 576
Score = 664 bits (1713), Expect = 0.0
Identities = 337/548 (61%), Positives = 419/548 (76%), Gaps = 1/548 (0%)
Frame = +2
Query: 137 YFDVFGPDAKADAVFKPATSESVLNLQDVQGLVTWVLGEGCMPSWVFIKNKPLIQKVVLL 316
++DV+GP+ KAD VF S LNL DVQGLVTWVL EG MPSWVFIKNKPLI KVV+L
Sbjct: 38 FYDVYGPEGKADIVFNSPEDNSTLNLSDVQGLVTWVLSEGFMPSWVFIKNKPLIPKVVML 97
Query: 317 YVPGLDAALYMAHTGLLAGLKEICGNPRAVLALSCVSDGMQTIDALLTSRLKRKREESNS 496
YVPGLDAAL+++ + +L LK+ CG PRA+LALSCVSDGMQTIDALLT ++KRKR+E++S
Sbjct: 98 YVPGLDAALFLSQSKMLPRLKKFCGKPRALLALSCVSDGMQTIDALLTCKMKRKRDENSS 157
Query: 497 SVKRPDQTLEPACTSSPDKSSSTELMKDLPFPILYYTLTTKEMEDNGYYNAQPDFVSTIP 676
+ + A TS D S EL KD+PFP+ YYTLT KE+E+NGY +P F+ST+P
Sbjct: 158 IMGKF------ARTSQQDSLSFKELTKDIPFPVTYYTLTEKELEENGYSVNKPGFLSTLP 211
Query: 677 APLGSSPYEMLALDCEMCVTINGLELTRXXXXXXXXXXXXXXXXXPSNDILDYNTRYSGI 856
AP GS YEMLALDCEMC+T G ELTR PSN I DYNTR+SGI
Sbjct: 212 APSGSPFYEMLALDCEMCITSEGFELTRITLVDVKGQVLIDKLVKPSNAITDYNTRFSGI 271
Query: 857 TCEMLNGVTTTLKDIQEEFIKLVYKETVVVGHSLENDLLALKISHNLVIDTAVLYKSPRG 1036
T EML+GVTT+L+DIQEEFIKLVYKET++VGHSLENDLLAL ISH+ VIDTAVLYK PRG
Sbjct: 272 TSEMLDGVTTSLRDIQEEFIKLVYKETILVGHSLENDLLALNISHDSVIDTAVLYKHPRG 331
Query: 1037 ASYKTALRVLARKFLSREIQDSGNGHDSTEDXXXXXXXXXXKIKHGPEFGTPPSTQSFMR 1216
+S+K ALR L ++FLSREIQ SGNGHDS ED KI++GP+FG+PPS F R
Sbjct: 332 SSHKNALRFLTKRFLSREIQQSGNGHDSIEDARATMELALLKIRNGPDFGSPPS---FTR 388
Query: 1217 KKLVTVLSECGKTCSFIDDVSLVKRYAAGSCNALPVTSDDEALSXXXXXXXXXXINFIWT 1396
KKL+++LSE GK S IDD+S+VKRYA+ S +A+PVTSDD AL+ ++FIWT
Sbjct: 389 KKLLSILSESGKISSLIDDISVVKRYASESSHAIPVTSDDVALAKANKEVKNEKVHFIWT 448
Query: 1397 QFSELHSYYKRRAEDTEKLNANVAEMISLLTCKRKSTGKKGIRSSMTSELKSILKRMDAR 1576
QFSELHSY K++AED+E LN +AEMI++ TC+ KG + + ++ELK IL RMDAR
Sbjct: 449 QFSELHSYLKKQAEDSESLNKRLAEMIAIKTCQNNFAKGKGFKLNASAELKEILARMDAR 508
Query: 1577 IQSLYTTLPNNAMLIVCTGHGDTALVQRLRKML-QESETTMCREKLVKVLEELQAQAEVA 1753
I +LY +LP NAM+I+CTGHGDTA+V+RLRKML +++E+ +CRE++V++LEE+QA+AEVA
Sbjct: 509 IHNLYLSLPTNAMMIICTGHGDTAIVRRLRKMLTEQNESNLCREEIVEILEEVQARAEVA 568
Query: 1754 LCFVGVKN 1777
LCFVGVK+
Sbjct: 569 LCFVGVKH 576