BLASTX nr result

ID: Cimicifuga21_contig00018198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018198
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80763.1| hypothetical protein VITISV_017069 [Vitis vinifera]    57   2e-06

>emb|CAN80763.1| hypothetical protein VITISV_017069 [Vitis vinifera]
          Length = 1127

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 57/223 (25%), Positives = 93/223 (41%), Gaps = 15/223 (6%)
 Frame = +1

Query: 10  REDFQCSLFLATLNPEFAVFKDQILANGTFPIATNAYSRL---QQTSFVHTPFPPKEAST 180
           RE      FLA L  EF   K QIL+N         +SR+   + TS +H     K  + 
Sbjct: 148 REKMAVMSFLAGLPSEFETAKSQILSNSEIGSLQEVFSRILRTEGTSSIHNDTGRKSNNR 207

Query: 181 ALVXXXXXXXXXXXXXTLRTDWVCDHCGVVGHIESFCYKKWGH*H----SDFAPASANAN 348
                              ++ VC +C    H + +C K   H      ++ A AS+ ++
Sbjct: 208 G------GSKTSDSYNNDSSNIVCYYCHEPDHTKKYCKKLQNHNQRNQIANVATASSTSS 261

Query: 349 HATNAPSYIIPDS*TDALSQILQRLENLNPGTFVSPPTATSVVSGNYAAMVS*TPAWVID 528
            +++    ++     D  ++  Q  E+L   T V     T++V      ++S +  WVID
Sbjct: 262 SSSDKTIMVL----VDGFAKFSQYQESLKISTSV-----TALVETGKTCLISSSNKWVID 312

Query: 529 SVASTHM--------SVHNFQTSKSVHLADGTTRIVLGSGTLQ 633
           S A+ HM        S  +      V +ADG+T  V+GSGT++
Sbjct: 313 SGATNHMIGNPKTFSSFQSHLAPSPVTIADGSTFNVVGSGTIK 355


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