BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018178
         (1518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38626.3| unnamed protein product [Vitis vinifera]              392   e-106
ref|XP_002264821.2| PREDICTED: ubiquinol-cytochrome c reductase ...   390   e-106
ref|XP_002865847.1| ubiquinol-cytochrome C chaperone family prot...   366   1e-98
ref|NP_199935.2| ubiquinol-cytochrome C chaperone family protein...   365   1e-98
dbj|BAF00827.1| hypothetical protein [Arabidopsis thaliana]           364   4e-98

>emb|CBI38626.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score =  392 bits (1006), Expect = e-106
 Identities = 198/286 (69%), Positives = 225/286 (78%), Gaps = 1/286 (0%)
 Frame = -2

Query: 1235 TMVPRLGRAITYLSKLATQNNMGSQRHLLF-GYRNYXXXXXXXXXXXXXXSIKGFSGNPE 1059
            TM+PR  RA   L KL +QNNM  ++   F   R+Y                K FS  PE
Sbjct: 69   TMLPRWSRAAIRLYKLGSQNNMELRKDFCFVASRSYAKVAAAADDSTE----KNFSRKPE 124

Query: 1058 VNLNRMFWSKPCSLALPLDSPRRVEEPKYEGIKHIIFKLLLFYSKQSKSIRGANVIYLRV 879
            V  N+MFWSKPCSLAL  DSP RVEEPKYEGI+HIIFK+LLFYSKQSKSIRGANV+Y R+
Sbjct: 125  VYFNKMFWSKPCSLALAQDSPLRVEEPKYEGIRHIIFKMLLFYSKQSKSIRGANVVYRRI 184

Query: 878  ISQVEKPAIYDVFSLEKTFKTTLSLLVLHMWLILRRLKEEGKEGVNLGQYLYEIYNHDVE 699
             SQV+KPAIY+ F+LEKTFKTT SLL+LHMWL LRRLKE+GKEGV  GQYLYEIYNHDVE
Sbjct: 185  ASQVDKPAIYNAFNLEKTFKTTFSLLILHMWLCLRRLKEDGKEGVEFGQYLYEIYNHDVE 244

Query: 698  LRVSKAGVNLLLHKWMKEVERIFYGNIVAYDAAMLPEAKQNELQTVIWRNIFSDDGSPMP 519
            LRVSKAGVNLLL +WMK++E+IFYGNIVAYDAAMLPEA+ +EL  VIW+NIFSDDG   P
Sbjct: 245  LRVSKAGVNLLLTRWMKDLEKIFYGNIVAYDAAMLPEARPDELPNVIWKNIFSDDGLSKP 304

Query: 518  NDAASRIAQAMARYVRRESACMSLTDKESLFSGNFMFTSLENPSKD 381
            NDAA+   QAMARY RRE +C+SLTDKES+FSGNF F+SLENP  D
Sbjct: 305  NDAAAGAVQAMARYARRECSCLSLTDKESIFSGNFTFSSLENPKSD 350


>ref|XP_002264821.2| PREDICTED: ubiquinol-cytochrome c reductase complex chaperone CBP3
            homolog [Vitis vinifera]
          Length = 285

 Score =  390 bits (1001), Expect = e-106
 Identities = 197/285 (69%), Positives = 224/285 (78%), Gaps = 1/285 (0%)
 Frame = -2

Query: 1232 MVPRLGRAITYLSKLATQNNMGSQRHLLF-GYRNYXXXXXXXXXXXXXXSIKGFSGNPEV 1056
            M+PR  RA   L KL +QNNM  ++   F   R+Y                K FS  PEV
Sbjct: 1    MLPRWSRAAIRLYKLGSQNNMELRKDFCFVASRSYAKVAAAADDSTE----KNFSRKPEV 56

Query: 1055 NLNRMFWSKPCSLALPLDSPRRVEEPKYEGIKHIIFKLLLFYSKQSKSIRGANVIYLRVI 876
              N+MFWSKPCSLAL  DSP RVEEPKYEGI+HIIFK+LLFYSKQSKSIRGANV+Y R+ 
Sbjct: 57   YFNKMFWSKPCSLALAQDSPLRVEEPKYEGIRHIIFKMLLFYSKQSKSIRGANVVYRRIA 116

Query: 875  SQVEKPAIYDVFSLEKTFKTTLSLLVLHMWLILRRLKEEGKEGVNLGQYLYEIYNHDVEL 696
            SQV+KPAIY+ F+LEKTFKTT SLL+LHMWL LRRLKE+GKEGV  GQYLYEIYNHDVEL
Sbjct: 117  SQVDKPAIYNAFNLEKTFKTTFSLLILHMWLCLRRLKEDGKEGVEFGQYLYEIYNHDVEL 176

Query: 695  RVSKAGVNLLLHKWMKEVERIFYGNIVAYDAAMLPEAKQNELQTVIWRNIFSDDGSPMPN 516
            RVSKAGVNLLL +WMK++E+IFYGNIVAYDAAMLPEA+ +EL  VIW+NIFSDDG   PN
Sbjct: 177  RVSKAGVNLLLTRWMKDLEKIFYGNIVAYDAAMLPEARPDELPNVIWKNIFSDDGLSKPN 236

Query: 515  DAASRIAQAMARYVRRESACMSLTDKESLFSGNFMFTSLENPSKD 381
            DAA+   QAMARY RRE +C+SLTDKES+FSGNF F+SLENP  D
Sbjct: 237  DAAAGAVQAMARYARRECSCLSLTDKESIFSGNFTFSSLENPKSD 281


>ref|XP_002865847.1| ubiquinol-cytochrome C chaperone family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297311682|gb|EFH42106.1|
            ubiquinol-cytochrome C chaperone family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 281

 Score =  366 bits (939), Expect = 1e-98
 Identities = 183/280 (65%), Positives = 217/280 (77%)
 Frame = -2

Query: 1232 MVPRLGRAITYLSKLATQNNMGSQRHLLFGYRNYXXXXXXXXXXXXXXSIKGFSGNPEVN 1053
            M+PRL R +T  SKL +    GS ++L F +  Y                K F     +N
Sbjct: 1    MLPRLARVVTQTSKLRSLTTNGSMKNLSF-FSRYGYATVAPAAADPPPK-KDFPSKSPIN 58

Query: 1052 LNRMFWSKPCSLALPLDSPRRVEEPKYEGIKHIIFKLLLFYSKQSKSIRGANVIYLRVIS 873
            L++MFWSKPCSLALP DSP R++EP Y GI+  I KL++FYSKQS SIRGANVIY R+I+
Sbjct: 59   LDKMFWSKPCSLALPKDSPLRIDEPDYVGIRRFILKLMMFYSKQSMSIRGANVIYKRIIA 118

Query: 872  QVEKPAIYDVFSLEKTFKTTLSLLVLHMWLILRRLKEEGKEGVNLGQYLYEIYNHDVELR 693
            QV+KPAIYDVF+LEKTFK T SLLVLHMWL+LRRLKE+G+EGV+LGQY+YEIYNHDVELR
Sbjct: 119  QVDKPAIYDVFNLEKTFKITFSLLVLHMWLVLRRLKEDGQEGVDLGQYVYEIYNHDVELR 178

Query: 692  VSKAGVNLLLHKWMKEVERIFYGNIVAYDAAMLPEAKQNELQTVIWRNIFSDDGSPMPND 513
            VSKAGVNLLL KWMKE+ERIFYGN+VAYDAA+LPEAK NELQ  +WRN+FSDDG+  P++
Sbjct: 179  VSKAGVNLLLAKWMKELERIFYGNVVAYDAALLPEAKPNELQIKLWRNVFSDDGTTTPDN 238

Query: 512  AASRIAQAMARYVRRESACMSLTDKESLFSGNFMFTSLEN 393
               + AQAMARYVRRE   +SLTD ES+FSGNF FT LEN
Sbjct: 239  TDLKAAQAMARYVRRELGSLSLTDNESIFSGNFSFTPLEN 278


>ref|NP_199935.2| ubiquinol-cytochrome C chaperone family protein [Arabidopsis
            thaliana] gi|63025180|gb|AAY27063.1| At5g51220
            [Arabidopsis thaliana] gi|87116650|gb|ABD19689.1|
            At5g51220 [Arabidopsis thaliana]
            gi|332008671|gb|AED96054.1| ubiquinol-cytochrome C
            chaperone family protein [Arabidopsis thaliana]
          Length = 281

 Score =  365 bits (938), Expect = 1e-98
 Identities = 182/280 (65%), Positives = 218/280 (77%)
 Frame = -2

Query: 1232 MVPRLGRAITYLSKLATQNNMGSQRHLLFGYRNYXXXXXXXXXXXXXXSIKGFSGNPEVN 1053
            M+PRL R +T  SKL +    GS ++L F +  Y                K F     +N
Sbjct: 1    MLPRLARVVTQTSKLRSLTTNGSMKNLSF-FSRYGYATVAPAAADPPSQ-KDFPSKSPIN 58

Query: 1052 LNRMFWSKPCSLALPLDSPRRVEEPKYEGIKHIIFKLLLFYSKQSKSIRGANVIYLRVIS 873
            L++MFWSKPCSLALP DSP R++EP Y GI+  I K+++FYSKQS SIRGANVIY R+I+
Sbjct: 59   LDKMFWSKPCSLALPKDSPLRIDEPDYVGIRRFILKMMMFYSKQSMSIRGANVIYKRIIA 118

Query: 872  QVEKPAIYDVFSLEKTFKTTLSLLVLHMWLILRRLKEEGKEGVNLGQYLYEIYNHDVELR 693
            QV+KPAIYDVF+LEKTFK T SLLVLHMWL+LRRLKE+G+EGV+LGQY+YEIYNHDVELR
Sbjct: 119  QVDKPAIYDVFNLEKTFKITYSLLVLHMWLVLRRLKEDGQEGVDLGQYVYEIYNHDVELR 178

Query: 692  VSKAGVNLLLHKWMKEVERIFYGNIVAYDAAMLPEAKQNELQTVIWRNIFSDDGSPMPND 513
            VSKAGVNLLL KWMKE+ERIFYGN+VAYDAA+LPEAK N+LQ  +WRN+FSDDG+  P++
Sbjct: 179  VSKAGVNLLLAKWMKELERIFYGNVVAYDAALLPEAKPNDLQIKLWRNVFSDDGTTTPDN 238

Query: 512  AASRIAQAMARYVRRESACMSLTDKESLFSGNFMFTSLEN 393
               + AQAMARYVRRE   +SLTDKES+FSGNF FT LEN
Sbjct: 239  TDLKTAQAMARYVRRELGSLSLTDKESIFSGNFSFTPLEN 278


>dbj|BAF00827.1| hypothetical protein [Arabidopsis thaliana]
          Length = 281

 Score =  364 bits (934), Expect = 4e-98
 Identities = 181/280 (64%), Positives = 217/280 (77%)
 Frame = -2

Query: 1232 MVPRLGRAITYLSKLATQNNMGSQRHLLFGYRNYXXXXXXXXXXXXXXSIKGFSGNPEVN 1053
            M+PRL R +T  SKL +    GS ++L F +  Y                K F     +N
Sbjct: 1    MLPRLARVVTQTSKLRSLTTNGSMKNLSF-FSRYGYATVAPAAADPPSQ-KDFPSKSPIN 58

Query: 1052 LNRMFWSKPCSLALPLDSPRRVEEPKYEGIKHIIFKLLLFYSKQSKSIRGANVIYLRVIS 873
            L++MFWSKPCSL LP DSP R++EP Y GI+  I K+++FYSKQS SIRGANVIY R+I+
Sbjct: 59   LDKMFWSKPCSLVLPKDSPLRIDEPDYVGIRRFILKMMMFYSKQSMSIRGANVIYKRIIA 118

Query: 872  QVEKPAIYDVFSLEKTFKTTLSLLVLHMWLILRRLKEEGKEGVNLGQYLYEIYNHDVELR 693
            QV+KPAIYDVF+LEKTFK T SLLVLHMWL+LRRLKE+G+EGV+LGQY+YEIYNHDVELR
Sbjct: 119  QVDKPAIYDVFNLEKTFKITYSLLVLHMWLVLRRLKEDGQEGVDLGQYVYEIYNHDVELR 178

Query: 692  VSKAGVNLLLHKWMKEVERIFYGNIVAYDAAMLPEAKQNELQTVIWRNIFSDDGSPMPND 513
            VSKAGVNLLL KWMKE+ERIFYGN+VAYDAA+LPEAK N+LQ  +WRN+FSDDG+  P++
Sbjct: 179  VSKAGVNLLLAKWMKELERIFYGNVVAYDAALLPEAKPNDLQIKLWRNVFSDDGTTTPDN 238

Query: 512  AASRIAQAMARYVRRESACMSLTDKESLFSGNFMFTSLEN 393
               + AQAMARYVRRE   +SLTDKES+FSGNF FT LEN
Sbjct: 239  TDLKTAQAMARYVRRELGSLSLTDKESIFSGNFSFTPLEN 278