BLASTX nr result

ID: Cimicifuga21_contig00018171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018171
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538209.1| PREDICTED: yrdC domain-containing protein, m...   195   3e-48
ref|XP_003606393.1| YrdC domain-containing protein [Medicago tru...   194   6e-48
ref|XP_002285123.1| PREDICTED: yrdC domain-containing protein, m...   191   4e-47
ref|XP_002313460.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46
ref|XP_002864693.1| hypothetical protein ARALYDRAFT_358267 [Arab...   189   3e-46

>ref|XP_003538209.1| PREDICTED: yrdC domain-containing protein, mitochondrial-like
           [Glycine max]
          Length = 290

 Score =  195 bits (496), Expect = 3e-48
 Identities = 94/114 (82%), Positives = 106/114 (92%)
 Frame = -1

Query: 344 PHGLLDNLLPGPVTVVLSRGESSILEKSLNPGLESIGVRVPDSNFIRVIARGSRSALALT 165
           PHGLLD+LLPGPVTVVL RG+SSILE+SLNPG +SIGVRVPD NFIR+IARGS +ALALT
Sbjct: 154 PHGLLDSLLPGPVTVVLKRGDSSILERSLNPGFDSIGVRVPDCNFIRIIARGSGTALALT 213

Query: 164 SANLSGQPSSVRIQDFENLWEHCAYVYDGGLLPSGRAGSTVVDLTTRGKYKILR 3
           SANLSGQPSS+ I+DFENLWEHCA+VYDGGL+PS RAGST+VDLTT  KY+ILR
Sbjct: 214 SANLSGQPSSLSIKDFENLWEHCAFVYDGGLIPSSRAGSTIVDLTTPHKYRILR 267


>ref|XP_003606393.1| YrdC domain-containing protein [Medicago truncatula]
           gi|355507448|gb|AES88590.1| YrdC domain-containing
           protein [Medicago truncatula]
          Length = 462

 Score =  194 bits (493), Expect = 6e-48
 Identities = 98/114 (85%), Positives = 105/114 (92%)
 Frame = -1

Query: 344 PHGLLDNLLPGPVTVVLSRGESSILEKSLNPGLESIGVRVPDSNFIRVIARGSRSALALT 165
           PHGLLD+LLPGPVTVVLSRGESS LE+SLNPG +SIGVRVPD NFIR+IARGS +ALALT
Sbjct: 95  PHGLLDSLLPGPVTVVLSRGESSALERSLNPGFDSIGVRVPDCNFIRLIARGSGTALALT 154

Query: 164 SANLSGQPSSVRIQDFENLWEHCAYVYDGGLLPSGRAGSTVVDLTTRGKYKILR 3
           SANLSGQPSSV I+DFE LWEHCA VYDGGLLPSGRAGSTVVDL+T  KYKILR
Sbjct: 155 SANLSGQPSSVCIKDFEKLWEHCASVYDGGLLPSGRAGSTVVDLSTPYKYKILR 208


>ref|XP_002285123.1| PREDICTED: yrdC domain-containing protein, mitochondrial [Vitis
           vinifera] gi|297746251|emb|CBI16307.3| unnamed protein
           product [Vitis vinifera]
          Length = 272

 Score =  191 bits (486), Expect = 4e-47
 Identities = 96/114 (84%), Positives = 104/114 (91%)
 Frame = -1

Query: 344 PHGLLDNLLPGPVTVVLSRGESSILEKSLNPGLESIGVRVPDSNFIRVIARGSRSALALT 165
           P GLL +LLPGPVTVVL RGE SI+EKSLNPGL+SIGVRVPD +FIRVIA GS +ALALT
Sbjct: 135 PDGLLGSLLPGPVTVVLRRGELSIIEKSLNPGLDSIGVRVPDCDFIRVIAHGSETALALT 194

Query: 164 SANLSGQPSSVRIQDFENLWEHCAYVYDGGLLPSGRAGSTVVDLTTRGKYKILR 3
           SANLSGQPSSV I+DFENLWEHCAYVYDGG+LPSGRAGSTVVDL+  GKYKILR
Sbjct: 195 SANLSGQPSSVCIKDFENLWEHCAYVYDGGVLPSGRAGSTVVDLSRLGKYKILR 248


>ref|XP_002313460.1| predicted protein [Populus trichocarpa] gi|222849868|gb|EEE87415.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  189 bits (481), Expect = 2e-46
 Identities = 92/114 (80%), Positives = 102/114 (89%)
 Frame = -1

Query: 344 PHGLLDNLLPGPVTVVLSRGESSILEKSLNPGLESIGVRVPDSNFIRVIARGSRSALALT 165
           PHGLLD+LLPGPVTV+L RGESS LEKSLNPGL+S+GVRVPD NFIRV+ARG   A+ALT
Sbjct: 95  PHGLLDSLLPGPVTVILRRGESSALEKSLNPGLDSVGVRVPDCNFIRVVARGLGKAVALT 154

Query: 164 SANLSGQPSSVRIQDFENLWEHCAYVYDGGLLPSGRAGSTVVDLTTRGKYKILR 3
           SANLSGQPSS+ I+DFENLW  CAYVYDGG+LPS RAGST+VDLT  GKYKILR
Sbjct: 155 SANLSGQPSSLCIKDFENLWNRCAYVYDGGVLPSNRAGSTIVDLTRPGKYKILR 208


>ref|XP_002864693.1| hypothetical protein ARALYDRAFT_358267 [Arabidopsis lyrata subsp.
           lyrata] gi|297310528|gb|EFH40952.1| hypothetical protein
           ARALYDRAFT_358267 [Arabidopsis lyrata subsp. lyrata]
          Length = 284

 Score =  189 bits (479), Expect = 3e-46
 Identities = 91/114 (79%), Positives = 102/114 (89%)
 Frame = -1

Query: 344 PHGLLDNLLPGPVTVVLSRGESSILEKSLNPGLESIGVRVPDSNFIRVIARGSRSALALT 165
           PHGLLD+LLPGPVT+VL RGESSILEKSLNPG+ +IGVRVPD  FIR ++RGS S LALT
Sbjct: 144 PHGLLDSLLPGPVTIVLQRGESSILEKSLNPGIGTIGVRVPDCEFIREVSRGSGSVLALT 203

Query: 164 SANLSGQPSSVRIQDFENLWEHCAYVYDGGLLPSGRAGSTVVDLTTRGKYKILR 3
           SANLSG  SSV ++DFENLW+HCAYVYDGGLLPSGRAGST+VDLT  GKYKI+R
Sbjct: 204 SANLSGDRSSVCVKDFENLWQHCAYVYDGGLLPSGRAGSTIVDLTKAGKYKIIR 257


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