BLASTX nr result

ID: Cimicifuga21_contig00018162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018162
         (1158 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Viti...   366   5e-99
ref|XP_002520982.1| F-box/leucine rich repeat protein, putative ...   361   2e-97
ref|XP_004172007.1| PREDICTED: F-box/LRR-repeat protein 17-like ...   355   1e-95
ref|XP_004146955.1| PREDICTED: F-box/LRR-repeat protein 17-like ...   355   1e-95
ref|XP_002300803.1| predicted protein [Populus trichocarpa] gi|2...   355   2e-95

>ref|XP_002275262.1| PREDICTED: F-box/LRR-repeat protein 17 [Vitis vinifera]
            gi|297735494|emb|CBI17934.3| unnamed protein product
            [Vitis vinifera]
          Length = 574

 Score =  366 bits (940), Expect = 5e-99
 Identities = 199/366 (54%), Positives = 234/366 (63%)
 Frame = +2

Query: 59   QRHHLSTPTANNPPFYTPTTTIFDLKRAKRRGNYNCGRCGQPKKGHSCHLTTAITTTDSH 238
            Q  H+  P        +    + D KR K+RG+YNCGRCGQPKKGHSC+L+ A T TDS 
Sbjct: 2    QHRHVPHPPTGGGSSASAMAALADAKRGKKRGSYNCGRCGQPKKGHSCNLSGAATPTDSS 61

Query: 239  PVIXXXXXXXXXXXXXXXXXXXXXXXXALSFDDEDDDTVSLTESDNEDGDGYTDLIEMVP 418
                                       ALSFDD D        +  E+     D  E   
Sbjct: 62   A----------STADPSPRQQYTHLRRALSFDDSD----VRRSAGAEEEVVVEDEEEAGS 107

Query: 419  DSSESGLPPGILWDVMTRLPPTSLLSAAKVCKRWRDCTRKVWKAAEELRLVVPVKSQIGF 598
            +    GLP   LW+VM RLPP ++L+AA+VCK WR+  R++W++AEELRL VP ++Q+GF
Sbjct: 108  ELGGGGLPASCLWEVMRRLPPAAMLAAAQVCKGWRETARRLWRSAEELRLRVPARAQVGF 167

Query: 599  VGSVLQKCSNLVRLSLSMESDVDVTMLACIAFSCPDLESMEIQMLHKAVNRITGDELGRF 778
            VGSVLQKC  LVRLSL MES VD TMLACIAFSCP+LE MEI     A+NRITGDELGRF
Sbjct: 168  VGSVLQKCPGLVRLSLRMESVVDATMLACIAFSCPNLEHMEISTAVTAINRITGDELGRF 227

Query: 779  VSDKRCLSSLKIEGCSNLGYFNXXXXXXXXXXXXXXXXXXKTVINCPNLMELSLDFSRQE 958
            V+DKRCL SLK+EGCSNLG F                   K   NCPNL E+SLDFSR E
Sbjct: 228  VADKRCLKSLKMEGCSNLGGFILCSSSLSTLWLSDLHSLSKMAFNCPNLKEISLDFSRHE 287

Query: 959  NESTDLATMVDGFGRSCPRLRNFHMASVRLSNSAVLALTDANLSGLRMLSLVLGSEVTDA 1138
            N+STDL TMVDG  R+C RL+N H+ASVRLS+S VLAL  AN  GLRMLSL+LGSE+TDA
Sbjct: 288  NDSTDLTTMVDGLARTCLRLQNIHIASVRLSHSVVLALAAANFRGLRMLSLLLGSEITDA 347

Query: 1139 SVAAIA 1156
            SVAAIA
Sbjct: 348  SVAAIA 353


>ref|XP_002520982.1| F-box/leucine rich repeat protein, putative [Ricinus communis]
            gi|223539819|gb|EEF41399.1| F-box/leucine rich repeat
            protein, putative [Ricinus communis]
          Length = 586

 Score =  361 bits (927), Expect = 2e-97
 Identities = 197/371 (53%), Positives = 238/371 (64%), Gaps = 1/371 (0%)
 Frame = +2

Query: 44   MHHNHQRH-HLSTPTANNPPFYTPTTTIFDLKRAKRRGNYNCGRCGQPKKGHSCHLTTAI 220
            M H +Q H   +TP  +     + +    +    K+RG+YNCGRCG PKKGH+CHL    
Sbjct: 1    MFHPNQPHISPATPGGSTASISSSSFDFNNKPPKKQRGSYNCGRCGLPKKGHTCHLPPHP 60

Query: 221  TTTDSHPVIXXXXXXXXXXXXXXXXXXXXXXXXALSFDDEDDDTVSLTESDNEDGDGYTD 400
             T  + P                          ALSFDD D   +     + E  +   D
Sbjct: 61   ATASTTPTSADSSSASTSRPLPLPRQQYSHLRRALSFDDID---IRCDSPEPEMDESELD 117

Query: 401  LIEMVPDSSESGLPPGILWDVMTRLPPTSLLSAAKVCKRWRDCTRKVWKAAEELRLVVPV 580
            L      S    LP   +W+V+ RLPP  LL+AA+VCK WRD  R++W+AAEELRL VP+
Sbjct: 118  LF----GSGSGRLPASCMWEVLRRLPPAGLLAAARVCKGWRDTARRLWRAAEELRLRVPI 173

Query: 581  KSQIGFVGSVLQKCSNLVRLSLSMESDVDVTMLACIAFSCPDLESMEIQMLHKAVNRITG 760
            ++Q+GFVGSVLQKC  LVRLSL MESDVD TMLACIAFSCP+LE MEI     AVNRI+G
Sbjct: 174  RAQLGFVGSVLQKCPGLVRLSLRMESDVDATMLACIAFSCPNLECMEISTSDTAVNRISG 233

Query: 761  DELGRFVSDKRCLSSLKIEGCSNLGYFNXXXXXXXXXXXXXXXXXXKTVINCPNLMELSL 940
            DEL RFV+DKRCL+SLK+EGCSNLG F                   KTV NCPNL E+SL
Sbjct: 234  DELSRFVADKRCLTSLKMEGCSNLGGFVLCSSSLSTLWLSDLYSLSKTVFNCPNLKEVSL 293

Query: 941  DFSRQENESTDLATMVDGFGRSCPRLRNFHMASVRLSNSAVLALTDANLSGLRMLSLVLG 1120
            DFSRQ+N++TDL  MVD  GRSC +L+N H+ASVRLS++AVLALT ANL GLRMLSLVLG
Sbjct: 294  DFSRQDNDNTDLIVMVDTLGRSCSKLQNIHIASVRLSHAAVLALTAANLRGLRMLSLVLG 353

Query: 1121 SEVTDASVAAI 1153
            +E+TDASVAAI
Sbjct: 354  TEITDASVAAI 364


>ref|XP_004172007.1| PREDICTED: F-box/LRR-repeat protein 17-like [Cucumis sativus]
          Length = 587

 Score =  355 bits (911), Expect = 1e-95
 Identities = 189/360 (52%), Positives = 238/360 (66%), Gaps = 4/360 (1%)
 Frame = +2

Query: 89   NNPPFYTPTTTIFDLKRAKRRGNYNCGRCGQPKKGHSCHLTTAITTTDSHPVIXXXXXXX 268
            ++P    PT +  DLKR K+RG+YNCGRCG PKKGH C+L ++ TTT    +        
Sbjct: 5    HHPQSSAPTVSNSDLKRGKKRGSYNCGRCGLPKKGHVCNLNSSSTTTTVTAITSTPTTDS 64

Query: 269  XXXXXXXXXXXXXXXXX--ALSFDDEDDDTVSLTES--DNEDGDGYTDLIEMVPDSSESG 436
                               ALSFD+ DD          D E+ +   D  ++ PDSS   
Sbjct: 65   TNSARGSTIDPASHSHLRRALSFDEADDLRSGFHSDLDDIEEAEPVFDYPDIDPDSSGC- 123

Query: 437  LPPGILWDVMTRLPPTSLLSAAKVCKRWRDCTRKVWKAAEELRLVVPVKSQIGFVGSVLQ 616
            LP   LW+V+ RLPPT +L+AA+VCK WR+ TRK+W+AAE LRL VP ++Q+GFVGS+LQ
Sbjct: 124  LPATCLWEVLRRLPPTGILAAARVCKGWRETTRKIWRAAEMLRLRVPPRAQVGFVGSLLQ 183

Query: 617  KCSNLVRLSLSMESDVDVTMLACIAFSCPDLESMEIQMLHKAVNRITGDELGRFVSDKRC 796
            KCS LV LSL +ESD+D  MLACIAFSCP+LE +EI     ++NRITG ELGRFV+DKRC
Sbjct: 184  KCSGLVTLSLRLESDLDSMMLACIAFSCPNLEVLEITKSQLSINRITGGELGRFVADKRC 243

Query: 797  LSSLKIEGCSNLGYFNXXXXXXXXXXXXXXXXXXKTVINCPNLMELSLDFSRQENESTDL 976
            L S K+EGCS+LG F+                  K   +CPNL E+SL+FSRQEN+STDL
Sbjct: 244  LKSFKMEGCSSLGSFSLCSSSLGTLWLSDLCSLSKMAFSCPNLKEISLEFSRQENDSTDL 303

Query: 977  ATMVDGFGRSCPRLRNFHMASVRLSNSAVLALTDANLSGLRMLSLVLGSEVTDASVAAIA 1156
              MVDG GR CPRL+N H++S RLS++ VLALT A L GLRMLSLVLG+++TDASVA+IA
Sbjct: 304  VAMVDGMGRGCPRLQNIHISSFRLSHAVVLALTAAQLRGLRMLSLVLGADITDASVASIA 363


>ref|XP_004146955.1| PREDICTED: F-box/LRR-repeat protein 17-like [Cucumis sativus]
          Length = 587

 Score =  355 bits (911), Expect = 1e-95
 Identities = 189/360 (52%), Positives = 238/360 (66%), Gaps = 4/360 (1%)
 Frame = +2

Query: 89   NNPPFYTPTTTIFDLKRAKRRGNYNCGRCGQPKKGHSCHLTTAITTTDSHPVIXXXXXXX 268
            ++P    PT +  DLKR K+RG+YNCGRCG PKKGH C+L ++ TTT    +        
Sbjct: 5    HHPQSSAPTVSNSDLKRGKKRGSYNCGRCGLPKKGHVCNLNSSSTTTTVTAITSTPTTDS 64

Query: 269  XXXXXXXXXXXXXXXXX--ALSFDDEDDDTVSLTES--DNEDGDGYTDLIEMVPDSSESG 436
                               ALSFD+ DD          D E+ +   D  ++ PDSS   
Sbjct: 65   TNSARGSTIDPASHSHLRRALSFDEADDLRSGFHSDLDDIEEAEPVFDYPDIDPDSSGC- 123

Query: 437  LPPGILWDVMTRLPPTSLLSAAKVCKRWRDCTRKVWKAAEELRLVVPVKSQIGFVGSVLQ 616
            LP   LW+V+ RLPPT +L+AA+VCK WR+ TRK+W+AAE LRL VP ++Q+GFVGS+LQ
Sbjct: 124  LPATCLWEVLRRLPPTGILAAARVCKGWRETTRKIWRAAEMLRLRVPPRAQVGFVGSLLQ 183

Query: 617  KCSNLVRLSLSMESDVDVTMLACIAFSCPDLESMEIQMLHKAVNRITGDELGRFVSDKRC 796
            KCS LV LSL +ESD+D  MLACIAFSCP+LE +EI     ++NRITG ELGRFV+DKRC
Sbjct: 184  KCSGLVTLSLRLESDLDSMMLACIAFSCPNLEVLEITKSQLSINRITGGELGRFVADKRC 243

Query: 797  LSSLKIEGCSNLGYFNXXXXXXXXXXXXXXXXXXKTVINCPNLMELSLDFSRQENESTDL 976
            L S K+EGCS+LG F+                  K   +CPNL E+SL+FSRQEN+STDL
Sbjct: 244  LKSFKMEGCSSLGSFSLCSSSLGTLWLSDLCSLSKMAFSCPNLKEISLEFSRQENDSTDL 303

Query: 977  ATMVDGFGRSCPRLRNFHMASVRLSNSAVLALTDANLSGLRMLSLVLGSEVTDASVAAIA 1156
              MVDG GR CPRL+N H++S RLS++ VLALT A L GLRMLSLVLG+++TDASVA+IA
Sbjct: 304  VAMVDGMGRGCPRLQNIHISSFRLSHAVVLALTAAQLRGLRMLSLVLGADITDASVASIA 363


>ref|XP_002300803.1| predicted protein [Populus trichocarpa] gi|222842529|gb|EEE80076.1|
            predicted protein [Populus trichocarpa]
          Length = 588

 Score =  355 bits (910), Expect = 2e-95
 Identities = 200/375 (53%), Positives = 237/375 (63%), Gaps = 4/375 (1%)
 Frame = +2

Query: 44   MHHNHQRHHLSTPTANNPPFYTPTTTIFDLKRA--KRRGNYNCGRCGQPKKGHSCHL--T 211
            MH  +Q H    P A  P   T + T  D+     K RGNYNCGRCG PKKGH CHL  T
Sbjct: 1    MHFENQPH---IPPAT-PGGSTASFTSLDIPHRVKKNRGNYNCGRCGLPKKGHVCHLPPT 56

Query: 212  TAITTTDSHPVIXXXXXXXXXXXXXXXXXXXXXXXXALSFDDEDDDTVSLTESDNEDGDG 391
            +  TTT +                            ALSFDD D   +     + E  + 
Sbjct: 57   STTTTTPTQTPTDSSVSVSTSTSRPPPRQQYSNLRRALSFDDSD---LRCDSPEVEIDES 113

Query: 392  YTDLIEMVPDSSESGLPPGILWDVMTRLPPTSLLSAAKVCKRWRDCTRKVWKAAEELRLV 571
              DL      S    LP   +W+++ RLPP  LL+A  VCK WR+  R++W+AAEELRL 
Sbjct: 114  EMDLF----GSGCGKLPVSCMWEILRRLPPAGLLAAGSVCKGWRETARRLWRAAEELRLR 169

Query: 572  VPVKSQIGFVGSVLQKCSNLVRLSLSMESDVDVTMLACIAFSCPDLESMEIQMLHKAVNR 751
            VP +SQ GFVGSVLQKC  L RL+L +ESD+D TM ACIAFSCP+LE++EI     AVNR
Sbjct: 170  VPPRSQPGFVGSVLQKCPGLSRLNLRLESDLDSTMFACIAFSCPNLEAVEISTSETAVNR 229

Query: 752  ITGDELGRFVSDKRCLSSLKIEGCSNLGYFNXXXXXXXXXXXXXXXXXXKTVINCPNLME 931
            ITGDELGRFV+DKRCL+SLK+EGCSNLG F                   K V NCPNL E
Sbjct: 230  ITGDELGRFVADKRCLTSLKMEGCSNLGGFVLCSSSLSTLWLSDLYCLSKMVFNCPNLKE 289

Query: 932  LSLDFSRQENESTDLATMVDGFGRSCPRLRNFHMASVRLSNSAVLALTDANLSGLRMLSL 1111
            +SLDFSRQEN+STD+  MVDG GRSCPRL+N H+ASVRLS++AVLALT ANL GLRMLSL
Sbjct: 290  ISLDFSRQENDSTDIIAMVDGLGRSCPRLQNVHVASVRLSHAAVLALTAANLRGLRMLSL 349

Query: 1112 VLGSEVTDASVAAIA 1156
            VLG+E+TDASV AI+
Sbjct: 350  VLGTEITDASVVAIS 364


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