BLASTX nr result

ID: Cimicifuga21_contig00018143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018143
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264271.1| PREDICTED: uncharacterized protein LOC100256...   218   9e-55
ref|XP_002325157.1| predicted protein [Populus trichocarpa] gi|2...   208   1e-51
ref|XP_002523537.1| structural constituent of ribosome, putative...   206   3e-51
emb|CBI25607.3| unnamed protein product [Vitis vinifera]              205   7e-51
gb|ADR71238.1| 30S ribosomal protein S6B [Hevea brasiliensis]         199   7e-49

>ref|XP_002264271.1| PREDICTED: uncharacterized protein LOC100256785 [Vitis vinifera]
          Length = 162

 Score =  218 bits (556), Expect = 9e-55
 Identities = 104/146 (71%), Positives = 117/146 (80%)
 Frame = +3

Query: 150 MPLYDCMLLLKPHIAKEKVMDLVARVGKHVQRRNGVLTDMKSFGTVQLGYGIKKLDGRYY 329
           MP YDCMLLLKPH+ KE +MDLVARVGKHV RRNGVLTD+KSFG V+LGYGIKKLDGRYY
Sbjct: 1   MPFYDCMLLLKPHVNKESLMDLVARVGKHVYRRNGVLTDIKSFGIVRLGYGIKKLDGRYY 60

Query: 330 KGQLMQMTMMATPNFNKELHYLNKEDRLLRWLLVKHRNAKYGLEFLSEEDGQGDLGSFPR 509
           +GQLMQM+MMATPNFNKELHYLNKEDRLLRWLLVKHRN KYGLEFL+E+D + +L  FPR
Sbjct: 61  QGQLMQMSMMATPNFNKELHYLNKEDRLLRWLLVKHRNTKYGLEFLNEDDVRSELSKFPR 120

Query: 510 SNIYXXXXXXXXXXXXXXXYRVEAEE 587
           S ++               Y V  +E
Sbjct: 121 STLFDDENIDEDDDDDDEEYEVNQDE 146


>ref|XP_002325157.1| predicted protein [Populus trichocarpa] gi|222866591|gb|EEF03722.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  208 bits (529), Expect = 1e-51
 Identities = 98/126 (77%), Positives = 112/126 (88%), Gaps = 2/126 (1%)
 Frame = +3

Query: 150 MPLYDCMLLLKPHIAKEKVMDLVARVGKHVQRRNGVLTDMKSFGTVQLGYGIKKLDGRYY 329
           MPLYDCML+LKPH+ KE +MDLVARVGKHV  RNGV+TD+KSFGTVQLGYGIKKLDGR+Y
Sbjct: 1   MPLYDCMLMLKPHVRKEALMDLVARVGKHVYSRNGVVTDIKSFGTVQLGYGIKKLDGRHY 60

Query: 330 KGQLMQMTMMATPNFNKELHYLNKEDRLLRWLLVKHRNAKYGLEFLSE--EDGQGDLGSF 503
           +GQLMQ+TMMATPN NKELHYLNKEDRLLRWLLVKHR+ K+GLEF+ E  EDG+ D   F
Sbjct: 61  QGQLMQITMMATPNINKELHYLNKEDRLLRWLLVKHRDIKFGLEFMDEDDEDGEFDFSEF 120

Query: 504 PRSNIY 521
           PR +I+
Sbjct: 121 PRDSIF 126


>ref|XP_002523537.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223537244|gb|EEF38876.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 162

 Score =  206 bits (525), Expect = 3e-51
 Identities = 97/124 (78%), Positives = 108/124 (87%)
 Frame = +3

Query: 150 MPLYDCMLLLKPHIAKEKVMDLVARVGKHVQRRNGVLTDMKSFGTVQLGYGIKKLDGRYY 329
           MPLYDCMLLLKPHI KE V+DLVARVGKHVQ RNGVLTDMKSFGT+QLGYGIKK + RY+
Sbjct: 1   MPLYDCMLLLKPHIHKEAVIDLVARVGKHVQSRNGVLTDMKSFGTIQLGYGIKKRENRYF 60

Query: 330 KGQLMQMTMMATPNFNKELHYLNKEDRLLRWLLVKHRNAKYGLEFLSEEDGQGDLGSFPR 509
           +GQLMQMTMMATPN NKELHYLNKEDRLLRWLLVKHR+ KYGL+F+ E DG+G+L     
Sbjct: 61  QGQLMQMTMMATPNINKELHYLNKEDRLLRWLLVKHRDTKYGLDFMDENDGKGELNKLSP 120

Query: 510 SNIY 521
           S  +
Sbjct: 121 SKYW 124


>emb|CBI25607.3| unnamed protein product [Vitis vinifera]
          Length = 156

 Score =  205 bits (522), Expect = 7e-51
 Identities = 99/140 (70%), Positives = 112/140 (80%)
 Frame = +3

Query: 168 MLLLKPHIAKEKVMDLVARVGKHVQRRNGVLTDMKSFGTVQLGYGIKKLDGRYYKGQLMQ 347
           MLLLKPH+ KE +MDLVARVGKHV RRNGVLTD+KSFG V+LGYGIKKLDGRYY+GQLMQ
Sbjct: 1   MLLLKPHVNKESLMDLVARVGKHVYRRNGVLTDIKSFGIVRLGYGIKKLDGRYYQGQLMQ 60

Query: 348 MTMMATPNFNKELHYLNKEDRLLRWLLVKHRNAKYGLEFLSEEDGQGDLGSFPRSNIYXX 527
           M+MMATPNFNKELHYLNKEDRLLRWLLVKHRN KYGLEFL+E+D + +L  FPRS ++  
Sbjct: 61  MSMMATPNFNKELHYLNKEDRLLRWLLVKHRNTKYGLEFLNEDDVRSELSKFPRSTLFDD 120

Query: 528 XXXXXXXXXXXXXYRVEAEE 587
                        Y V  +E
Sbjct: 121 ENIDEDDDDDDEEYEVNQDE 140


>gb|ADR71238.1| 30S ribosomal protein S6B [Hevea brasiliensis]
          Length = 163

 Score =  199 bits (505), Expect = 7e-49
 Identities = 94/115 (81%), Positives = 104/115 (90%)
 Frame = +3

Query: 150 MPLYDCMLLLKPHIAKEKVMDLVARVGKHVQRRNGVLTDMKSFGTVQLGYGIKKLDGRYY 329
           MPLYDCMLLLKPH+ KE +MDLVARVGKHV  RNGVLTD+KSFGT+QLGYGIKKLDGRYY
Sbjct: 1   MPLYDCMLLLKPHVRKEALMDLVARVGKHVYARNGVLTDIKSFGTIQLGYGIKKLDGRYY 60

Query: 330 KGQLMQMTMMATPNFNKELHYLNKEDRLLRWLLVKHRNAKYGLEFLSEEDGQGDL 494
           +GQLMQMTMMATPN NKELHYLNKEDRLLRWLLVKHR+   GLEFL E++ + +L
Sbjct: 61  QGQLMQMTMMATPNINKELHYLNKEDRLLRWLLVKHRDTTDGLEFLEEDNDKEEL 115


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