BLASTX nr result

ID: Cimicifuga21_contig00018128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018128
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329746.1| predicted protein [Populus trichocarpa] gi|2...   196   4e-48
gb|ABY61022.1| zinc finger-homeodomain protein 3, partial [Eschs...   194   1e-47
ref|XP_002318316.1| predicted protein [Populus trichocarpa] gi|2...   192   4e-47
ref|XP_004137520.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   189   5e-46
gb|ABY61026.1| zinc finger-homeodomain protein 1, partial [Lirio...   187   2e-45

>ref|XP_002329746.1| predicted protein [Populus trichocarpa] gi|222870654|gb|EEF07785.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  196 bits (498), Expect = 4e-48
 Identities = 103/195 (52%), Positives = 130/195 (66%), Gaps = 12/195 (6%)
 Frame = +1

Query: 67  MDIDDPSETYRECLRNHAASLGSYATDGCGEFTLDET-TPETLKCAACGCHRNFHRKVIV 243
           M+ D+ ++ Y+ECLRNHAASLGSYATDGCGEFTLD+T +P +L+CAACGCHRNFHRKV  
Sbjct: 1   MESDNTNDLYKECLRNHAASLGSYATDGCGEFTLDDTSSPYSLQCAACGCHRNFHRKVTY 60

Query: 244 TMXXXXXXXXXXXXXXXXXXXDSDVVELLEYEAGQSNQ-----------SERGGKKRVRS 390
           +                    ++ V+E+++Y  G + +            ER GKKR R+
Sbjct: 61  S-----NSSNRRDHIMHPPSSETVVMEMIDYAEGNNERDFRPPVMVVESGERSGKKRYRT 115

Query: 391 KFSVEQKEKMLEFAEKLGWRIKRKDGEEDEIERFCRSVGVSRQVFKVWMHNHKTXXXXXX 570
           KF+ EQKEKML FAEKLGW+++RKD EEDE+ERFCR +G+SRQVFKVWMHNHK       
Sbjct: 116 KFTPEQKEKMLGFAEKLGWKLQRKD-EEDEVERFCRGIGISRQVFKVWMHNHKNSSSSTS 174

Query: 571 XXXXHNTTRNVSSLT 615
                 +T N SSLT
Sbjct: 175 A-----STGNASSLT 184


>gb|ABY61022.1| zinc finger-homeodomain protein 3, partial [Eschscholzia
           californica]
          Length = 192

 Score =  194 bits (493), Expect = 1e-47
 Identities = 102/189 (53%), Positives = 125/189 (66%), Gaps = 11/189 (5%)
 Frame = +1

Query: 85  SETYRECLRNHAASLGSYATDGCGEFTLDETTPETLKCAACGCHRNFHRKVIVTMXXXXX 264
           +E+YR+CLRNHAASLGSYATDGCGEFTL++++P  LKCAACGCHRNFHRK+++       
Sbjct: 14  NESYRDCLRNHAASLGSYATDGCGEFTLNDSSPGELKCAACGCHRNFHRKIVIASNVSIS 73

Query: 265 XXXXXXXXXXXXXXDSDVVELLEYEAG-----QSNQSERG--GKKRVRSKFSVEQKEKML 423
                           +  E++EY A       S++ ER    KKR R+KF+VEQKEKML
Sbjct: 74  RDSVY----------EEEEEMIEYGARHLNSMSSHEIERSTVNKKRNRTKFTVEQKEKML 123

Query: 424 EFAEKLGWRIKRKD----GEEDEIERFCRSVGVSRQVFKVWMHNHKTXXXXXXXXXXHNT 591
           EFAEKLGW++ RKD    G+ED+I RFCRS+G+SRQVFKVWMHNHK              
Sbjct: 124 EFAEKLGWKMIRKDEDKNGDEDQIGRFCRSLGISRQVFKVWMHNHKNISSPSTTTTSAYA 183

Query: 592 TRNVSSLTQ 618
             N SSLTQ
Sbjct: 184 NNNASSLTQ 192


>ref|XP_002318316.1| predicted protein [Populus trichocarpa] gi|222858989|gb|EEE96536.1|
           predicted protein [Populus trichocarpa]
          Length = 156

 Score =  192 bits (489), Expect = 4e-47
 Identities = 94/163 (57%), Positives = 117/163 (71%), Gaps = 11/163 (6%)
 Frame = +1

Query: 94  YRECLRNHAASLGSYATDGCGEFTLDETTPETLKCAACGCHRNFHRKVIVTMXXXXXXXX 273
           Y+ECLRNHAASLGSYATDGCGEFTLD+T+  TL+CAACGCHRNFHRKV  +         
Sbjct: 1   YKECLRNHAASLGSYATDGCGEFTLDDTSLSTLQCAACGCHRNFHRKVSYS--------N 52

Query: 274 XXXXXXXXXXXDSDVVELLEYEAGQSNQS-----------ERGGKKRVRSKFSVEQKEKM 420
                      ++ V+E+++Y  G + ++           ER GKKR R+KF+ EQ+EKM
Sbjct: 53  RRDHIMHSPSSETVVMEMMDYAEGNNERNSRPPVMVVESGERSGKKRFRTKFTAEQREKM 112

Query: 421 LEFAEKLGWRIKRKDGEEDEIERFCRSVGVSRQVFKVWMHNHK 549
           +EFAEKLGW+++RKD EEDE+ERFC  +GVSRQVFKVWMHNHK
Sbjct: 113 MEFAEKLGWKLQRKD-EEDEVERFCEGIGVSRQVFKVWMHNHK 154


>ref|XP_004137520.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Cucumis sativus]
           gi|449534323|ref|XP_004174113.1| PREDICTED: ZF-HD
           homeobox protein At4g24660-like [Cucumis sativus]
          Length = 177

 Score =  189 bits (480), Expect = 5e-46
 Identities = 103/186 (55%), Positives = 122/186 (65%), Gaps = 2/186 (1%)
 Frame = +1

Query: 67  MDIDDPSETYRECLRNHAASLGSYATDGCGEFTLDETT--PETLKCAACGCHRNFHRKVI 240
           MD ++ +  YRECLRNHAASLGSYATDGCGEFTLD+++     L CAACGCHRNFHRKV 
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKV- 59

Query: 241 VTMXXXXXXXXXXXXXXXXXXXDSDVVELLEYEAGQSNQSERGGKKRVRSKFSVEQKEKM 420
                                 D D   ++EY A  + +S  G KKR R+KF+ +QKEKM
Sbjct: 60  --TYIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGSKKRFRTKFTADQKEKM 117

Query: 421 LEFAEKLGWRIKRKDGEEDEIERFCRSVGVSRQVFKVWMHNHKTXXXXXXXXXXHNTTRN 600
           L FAEKLGW+++RKD  +DEIERFCRSVGV+RQVFKVWMHNHK             +T N
Sbjct: 118 LAFAEKLGWKLQRKD-LDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSA-----STGN 171

Query: 601 VSSLTQ 618
            SSLTQ
Sbjct: 172 ASSLTQ 177


>gb|ABY61026.1| zinc finger-homeodomain protein 1, partial [Liriodendron
           tulipifera]
          Length = 164

 Score =  187 bits (475), Expect = 2e-45
 Identities = 100/182 (54%), Positives = 116/182 (63%), Gaps = 1/182 (0%)
 Frame = +1

Query: 76  DDPSETYRECLRNHAASLGSYATDGCGEFTLDETTPETLKCAACGCHRNFHRKVIVTMXX 255
           + P+ETYRECLRNHAA+LGSYATDGCGEFT DE+    L CAACGCHRNFHRKV +T   
Sbjct: 5   NSPNETYRECLRNHAATLGSYATDGCGEFTPDESRAGGLTCAACGCHRNFHRKVHLTART 64

Query: 256 XXXXXXXXXXXXXXXXXDSDV-VELLEYEAGQSNQSERGGKKRVRSKFSVEQKEKMLEFA 432
                            DS + V      + +   S+R  KKR R+KFS EQKEKM  FA
Sbjct: 65  -----------------DSPLFVAFARDSSVEQPDSDRTAKKRSRTKFSAEQKEKMTRFA 107

Query: 433 EKLGWRIKRKDGEEDEIERFCRSVGVSRQVFKVWMHNHKTXXXXXXXXXXHNTTRNVSSL 612
           E +GWRI+R+DG+ DEI RFC  +GVSRQVFKVWMHNHK            +T  N SSL
Sbjct: 108 ETIGWRIQRRDGDVDEIARFCSEIGVSRQVFKVWMHNHKN-----SASSSSSTGGNASSL 162

Query: 613 TQ 618
           TQ
Sbjct: 163 TQ 164


Top