BLASTX nr result

ID: Cimicifuga21_contig00018125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018125
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267650.2| PREDICTED: ABC transporter C family member 1...   163   2e-38
emb|CBI22551.3| unnamed protein product [Vitis vinifera]              163   2e-38
emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]   163   2e-38
ref|XP_002513606.1| multidrug resistance-associated protein 1, 3...   161   4e-38
ref|XP_002318361.1| multidrug resistance protein ABC transporter...   158   5e-37

>ref|XP_002267650.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1532

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/111 (72%), Positives = 90/111 (81%)
 Frame = +1

Query: 1    AESIAGAMTIRAFEMEERFFDQNLDLIDTNASPFLHNFAANEWLVQRXXXXXXXXXXXXX 180
            AESIAGAMTIRAFE EERFF +N+D IDTNASPF H+FAANEWL+QR             
Sbjct: 1148 AESIAGAMTIRAFEEEERFFVKNMDFIDTNASPFFHSFAANEWLIQRLEALSAMVLSSSA 1207

Query: 181  XXMVLLPPGTFSPGFIGMALSYALALNISLVFSIQNQCILANYIISVERLN 333
              M+LLPPGTF+ GFIGMA+SY L+LN+SLVFSIQNQCILANYIISVERLN
Sbjct: 1208 LCMILLPPGTFTAGFIGMAMSYGLSLNVSLVFSIQNQCILANYIISVERLN 1258


>emb|CBI22551.3| unnamed protein product [Vitis vinifera]
          Length = 1395

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/111 (72%), Positives = 90/111 (81%)
 Frame = +1

Query: 1    AESIAGAMTIRAFEMEERFFDQNLDLIDTNASPFLHNFAANEWLVQRXXXXXXXXXXXXX 180
            AESIAGAMTIRAFE EERFF +N+D IDTNASPF H+FAANEWL+QR             
Sbjct: 1011 AESIAGAMTIRAFEEEERFFVKNMDFIDTNASPFFHSFAANEWLIQRLEALSAMVLSSSA 1070

Query: 181  XXMVLLPPGTFSPGFIGMALSYALALNISLVFSIQNQCILANYIISVERLN 333
              M+LLPPGTF+ GFIGMA+SY L+LN+SLVFSIQNQCILANYIISVERLN
Sbjct: 1071 LCMILLPPGTFTAGFIGMAMSYGLSLNVSLVFSIQNQCILANYIISVERLN 1121


>emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]
          Length = 1480

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/111 (72%), Positives = 90/111 (81%)
 Frame = +1

Query: 1    AESIAGAMTIRAFEMEERFFDQNLDLIDTNASPFLHNFAANEWLVQRXXXXXXXXXXXXX 180
            AESIAGAMTIRAFE EERFF +N+D IDTNASPF H+FAANEWL+QR             
Sbjct: 1096 AESIAGAMTIRAFEEEERFFVKNMDFIDTNASPFFHSFAANEWLIQRLEALSAMVLSSSA 1155

Query: 181  XXMVLLPPGTFSPGFIGMALSYALALNISLVFSIQNQCILANYIISVERLN 333
              M+LLPPGTF+ GFIGMA+SY L+LN+SLVFSIQNQCILANYIISVERLN
Sbjct: 1156 LCMILLPPGTFTAGFIGMAMSYGLSLNVSLVFSIQNQCILANYIISVERLN 1206


>ref|XP_002513606.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
            gi|223547514|gb|EEF49009.1| multidrug
            resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
          Length = 1481

 Score =  161 bits (408), Expect = 4e-38
 Identities = 82/111 (73%), Positives = 89/111 (80%)
 Frame = +1

Query: 1    AESIAGAMTIRAFEMEERFFDQNLDLIDTNASPFLHNFAANEWLVQRXXXXXXXXXXXXX 180
            AES+AGAMTIRAF  EERFF +NLDLIDTNASPF H+FAANEWL+QR             
Sbjct: 1097 AESVAGAMTIRAFGEEERFFAKNLDLIDTNASPFFHSFAANEWLIQRLETLSATVLASAA 1156

Query: 181  XXMVLLPPGTFSPGFIGMALSYALALNISLVFSIQNQCILANYIISVERLN 333
              MVLLPPGTFS GFIGMALSY L+LN+SLVFSIQNQC +ANYIISVERLN
Sbjct: 1157 LCMVLLPPGTFSSGFIGMALSYGLSLNMSLVFSIQNQCTIANYIISVERLN 1207


>ref|XP_002318361.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222859034|gb|EEE96581.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1018

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/111 (71%), Positives = 89/111 (80%)
 Frame = +1

Query: 1   AESIAGAMTIRAFEMEERFFDQNLDLIDTNASPFLHNFAANEWLVQRXXXXXXXXXXXXX 180
           AES+AGAMTIRAFE EE FF++NL+LID N++PF HNFAANEWL+QR             
Sbjct: 644 AESVAGAMTIRAFEEEEHFFEKNLNLIDINSTPFFHNFAANEWLIQRLETFSACVLASAA 703

Query: 181 XXMVLLPPGTFSPGFIGMALSYALALNISLVFSIQNQCILANYIISVERLN 333
             MVLLPPGTFS GFIGMALSY L+LNIS+V SIQNQC+LANYIISVERLN
Sbjct: 704 LCMVLLPPGTFSSGFIGMALSYGLSLNISMVSSIQNQCMLANYIISVERLN 754


Top