BLASTX nr result

ID: Cimicifuga21_contig00018102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018102
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270044.1| PREDICTED: uncharacterized protein LOC100251...    73   3e-11
ref|XP_004134782.1| PREDICTED: uncharacterized protein LOC101203...    64   1e-08
gb|ABD32666.1| conserved hypothetical protein [Medicago truncatula]    59   5e-07
ref|XP_003594150.1| Cytochrome b6 [Medicago truncatula] gi|35548...    59   5e-07
ref|XP_002331562.1| predicted protein [Populus trichocarpa] gi|1...    56   3e-06

>ref|XP_002270044.1| PREDICTED: uncharacterized protein LOC100251709 [Vitis vinifera]
          Length = 340

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
 Frame = -1

Query: 218 QVRRGGSGLRNAEPGVRNVEKGVRKS-VESRLSKS---SDVGASSKGRGLNLNVPMCIGY 51
           QVRRGGS  ++ EP VRN EKG +K   E+R +++   +      K R LNLNVPMCIGY
Sbjct: 222 QVRRGGSASKSLEPLVRNAEKGSKKEGSENRRNRTPAPAPPAGIPKARVLNLNVPMCIGY 281

Query: 50  RQQLSCRRDENILVG 6
           R  LSCR DEN  +G
Sbjct: 282 RHHLSCRSDENSTIG 296


>ref|XP_004134782.1| PREDICTED: uncharacterized protein LOC101203369 [Cucumis sativus]
           gi|449518021|ref|XP_004166042.1| PREDICTED:
           uncharacterized protein LOC101223271 [Cucumis sativus]
          Length = 332

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/75 (52%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
 Frame = -1

Query: 218 QVRRGGSGLRNAEPGVRNVEKGVRKSV-ESRLSKSSDVGASSKG---RGLNLNVPMCIGY 51
           QVRRGGS  +  E   RN +K  RK   E   SK++   ASS     R LNLNVPMCIGY
Sbjct: 206 QVRRGGSVPKTPETFSRNADKPARKEPSEVHRSKAATAAASSSASRVRVLNLNVPMCIGY 265

Query: 50  RQQLSCRRDENILVG 6
           R  LSCR DE   +G
Sbjct: 266 RNHLSCRSDETSALG 280


>gb|ABD32666.1| conserved hypothetical protein [Medicago truncatula]
          Length = 347

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
 Frame = -1

Query: 218 QVRRGGSGLRNAEPGVR---NVEKGVRKSVESRLSKSSDV--GASSKGRGLNLNVPMCIG 54
           QVRRGG   +N++   +   N +K ++K  E+ +S+ S V  G   K + L+LNVPMCIG
Sbjct: 230 QVRRGGG--KNSDQQTQQGSNTDKELKK--EATVSRRSKVVSGGGGKAKVLSLNVPMCIG 285

Query: 53  YRQQLSCRRDENILVG 6
           YR  LSCR DEN  +G
Sbjct: 286 YRHHLSCRSDENSAIG 301


>ref|XP_003594150.1| Cytochrome b6 [Medicago truncatula] gi|355483198|gb|AES64401.1|
           Cytochrome b6 [Medicago truncatula]
          Length = 385

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
 Frame = -1

Query: 218 QVRRGGSGLRNAEPGVR---NVEKGVRKSVESRLSKSSDV--GASSKGRGLNLNVPMCIG 54
           QVRRGG   +N++   +   N +K ++K  E+ +S+ S V  G   K + L+LNVPMCIG
Sbjct: 230 QVRRGGG--KNSDQQTQQGSNTDKELKK--EATVSRRSKVVSGGGGKAKVLSLNVPMCIG 285

Query: 53  YRQQLSCRRDENILVG 6
           YR  LSCR DEN  +G
Sbjct: 286 YRHHLSCRSDENSAIG 301


>ref|XP_002331562.1| predicted protein [Populus trichocarpa] gi|118484607|gb|ABK94177.1|
           unknown [Populus trichocarpa]
           gi|222873786|gb|EEF10917.1| predicted protein [Populus
           trichocarpa]
          Length = 358

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
 Frame = -1

Query: 218 QVRRGGS-GLRNAEPG--VRNVEKGVRKSVESRLSKSSDVGA---SSKGRGLNLNVPMCI 57
           Q RRGGS G++++ P   VR+ EK   K   +   +  ++ +   S++ + LN+NVP+CI
Sbjct: 237 QARRGGSSGMKSSFPEAVVRSGEKLSSKKEVTEPGRGKNIASGNGSTRAKVLNINVPVCI 296

Query: 56  GYRQQLSCRRDENILVG 6
           GYR  LSCR DEN  +G
Sbjct: 297 GYRNHLSCRSDENSAIG 313


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