BLASTX nr result

ID: Cimicifuga21_contig00018100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018100
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26017.3| unnamed protein product [Vitis vinifera]              168   5e-40
ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   168   5e-40
emb|CAN81146.1| hypothetical protein VITISV_020811 [Vitis vinifera]   166   2e-39
ref|XP_002452349.1| hypothetical protein SORBIDRAFT_04g024110 [S...   159   3e-37
ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-l...   158   4e-37

>emb|CBI26017.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  168 bits (425), Expect = 5e-40
 Identities = 79/100 (79%), Positives = 89/100 (89%)
 Frame = +2

Query: 2   MGALLQLEVEGSGFLYRQVRNMVALLLQVGKEAVPPDIVPMILDAQDRKVLAKYTVSARP 181
           MGALLQLEVEGSGFLYRQVRNMVALLLQ+G+EA+PP+IVP IL  +DRK LAKY +SA P
Sbjct: 227 MGALLQLEVEGSGFLYRQVRNMVALLLQIGREAIPPNIVPWILATRDRKELAKYALSAPP 286

Query: 182 HGLCLMSIKYDEELLEPPSGCPTTSFGRHHTITKCKLPFY 301
           HGLCLMS+KY+EE L+ PSGCP TS GRHHT+ KCKLPFY
Sbjct: 287 HGLCLMSVKYNEEHLQLPSGCPATSHGRHHTVRKCKLPFY 326


>ref|XP_002275097.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Vitis vinifera]
          Length = 336

 Score =  168 bits (425), Expect = 5e-40
 Identities = 79/100 (79%), Positives = 89/100 (89%)
 Frame = +2

Query: 2   MGALLQLEVEGSGFLYRQVRNMVALLLQVGKEAVPPDIVPMILDAQDRKVLAKYTVSARP 181
           MGALLQLEVEGSGFLYRQVRNMVALLLQ+G+EA+PP+IVP IL  +DRK LAKY +SA P
Sbjct: 237 MGALLQLEVEGSGFLYRQVRNMVALLLQIGREAIPPNIVPWILATRDRKELAKYALSAPP 296

Query: 182 HGLCLMSIKYDEELLEPPSGCPTTSFGRHHTITKCKLPFY 301
           HGLCLMS+KY+EE L+ PSGCP TS GRHHT+ KCKLPFY
Sbjct: 297 HGLCLMSVKYNEEHLQLPSGCPATSHGRHHTVRKCKLPFY 336


>emb|CAN81146.1| hypothetical protein VITISV_020811 [Vitis vinifera]
          Length = 403

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/99 (78%), Positives = 88/99 (88%)
 Frame = +2

Query: 5   GALLQLEVEGSGFLYRQVRNMVALLLQVGKEAVPPDIVPMILDAQDRKVLAKYTVSARPH 184
           GALLQLEVEGSGFLYRQVRNMVALLLQ+G+EA+PP+IVP IL  +DRK LAKY +SA PH
Sbjct: 305 GALLQLEVEGSGFLYRQVRNMVALLLQIGREAIPPNIVPWILATRDRKELAKYALSAPPH 364

Query: 185 GLCLMSIKYDEELLEPPSGCPTTSFGRHHTITKCKLPFY 301
           GLCLMS+KY+EE L+ PSGCP TS GRHHT+ KCKLPFY
Sbjct: 365 GLCLMSVKYNEEHLQLPSGCPATSHGRHHTVRKCKLPFY 403


>ref|XP_002452349.1| hypothetical protein SORBIDRAFT_04g024110 [Sorghum bicolor]
           gi|241932180|gb|EES05325.1| hypothetical protein
           SORBIDRAFT_04g024110 [Sorghum bicolor]
          Length = 201

 Score =  159 bits (401), Expect = 3e-37
 Identities = 75/100 (75%), Positives = 86/100 (86%)
 Frame = +2

Query: 2   MGALLQLEVEGSGFLYRQVRNMVALLLQVGKEAVPPDIVPMILDAQDRKVLAKYTVSARP 181
           MGA+LQLEVEG+GFLYRQVRNMVALLLQVGKEA+PPDIVP I+  +DRK LAK  +SA P
Sbjct: 102 MGAVLQLEVEGTGFLYRQVRNMVALLLQVGKEALPPDIVPAIIAVRDRKELAKVALSAPP 161

Query: 182 HGLCLMSIKYDEELLEPPSGCPTTSFGRHHTITKCKLPFY 301
           HGLCLMS+ YDEE+L+PP G P  SFGR H ++KCKLPFY
Sbjct: 162 HGLCLMSVNYDEEILKPPEGSPPVSFGRTHHLSKCKLPFY 201


>ref|XP_003550576.1| PREDICTED: tRNA pseudouridine synthase A 1-like [Glycine max]
          Length = 309

 Score =  158 bits (400), Expect = 4e-37
 Identities = 76/101 (75%), Positives = 88/101 (87%), Gaps = 1/101 (0%)
 Frame = +2

Query: 2   MGALLQLEVEGSGFLYRQVRNMVALLLQVGKEAVPPDIVPMILDAQDRKVLAKYTVSARP 181
           MGALLQ+EVEGSGFLYRQVRNMVALLLQ+G+EA+PPDIVP IL ++DRK LAKY++SA P
Sbjct: 208 MGALLQIEVEGSGFLYRQVRNMVALLLQIGREAIPPDIVPHILASRDRKELAKYSLSAPP 267

Query: 182 HGLCLMSIKYDEELLEPPSGC-PTTSFGRHHTITKCKLPFY 301
           HGLCL+SI Y+E  L PP GC P  SFGRHHTI KCK+PF+
Sbjct: 268 HGLCLVSINYNESHLLPPPGCPPANSFGRHHTIRKCKVPFF 308


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