BLASTX nr result

ID: Cimicifuga21_contig00018071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018071
         (991 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38754.3| unnamed protein product [Vitis vinifera]               94   5e-17
ref|XP_002276478.2| PREDICTED: uncharacterized protein LOC100263...    94   7e-17
emb|CAN82262.1| hypothetical protein VITISV_009280 [Vitis vinifera]    93   9e-17
ref|XP_002320778.1| predicted protein [Populus trichocarpa] gi|2...    76   1e-11
ref|XP_002336747.1| predicted protein [Populus trichocarpa] gi|2...    75   3e-11

>emb|CBI38754.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 80/233 (34%), Positives = 113/233 (48%), Gaps = 21/233 (9%)
 Frame = +1

Query: 28  VPVATKRIPESPKRPRHYASPLHESGGMNSNFNIESSTLLPNLSLG-----------CFG 174
           +PV+ KR  + PKR     S    SG ++S    +S    P+               C  
Sbjct: 376 LPVSAKRSLQPPKRMSKLLST-DSSGAIDSGSRGQSKNFFPSTQTHEVNGTNEHTEKCLN 434

Query: 175 IENG--------PLMRKNSDISLKNGRFSTTENNIQLANSPVCCSTPPSHRGSIYVNGSS 330
           +E+         PL  +  +  L++G F  +++ IQ ++SPV   TP S+   I  + SS
Sbjct: 435 LEDKNLGGLCYEPLNLEGLNTFLQSGTFPRSDSYIQQSSSPVSSYTPASNGKGISGSCSS 494

Query: 331 PEAILRSAAKNFKNTPSIIRKRTRETPKQDHNANYSNDVCMSEVRXXXXXXXXXXXPAWD 510
           PE+ILRSAA++FKNTPSIIRKR R TP +  NAN                         +
Sbjct: 495 PESILRSAARSFKNTPSIIRKRNR-TPIETDNAN-------------------------N 528

Query: 511 NVLTGQDDLTSTQLL-NVKWLSLSSPGVQ-AETDVALRSVEKRLEYAFDLEWD 663
           N  TG ++ T +++L  VK L LS P  Q  +    ++ VEKRLEYAFD E D
Sbjct: 529 NDGTGTEEKTDSKVLPKVKQLFLSPPKSQKLDPSSVVKLVEKRLEYAFDKEQD 581


>ref|XP_002276478.2| PREDICTED: uncharacterized protein LOC100263258 [Vitis vinifera]
          Length = 606

 Score = 93.6 bits (231), Expect = 7e-17
 Identities = 81/264 (30%), Positives = 125/264 (47%), Gaps = 29/264 (10%)
 Frame = +1

Query: 7    CRSSHIAVPVATKRIPESPKRPRHYASPLHESGGMNSNFNIESSTLLPNLSLGCFG---- 174
            C +      + +KR  ESPKRP  Y     +    +  F+ E+   L +LS   FG    
Sbjct: 358  CNAPEAVASLTSKRRLESPKRPWTY-----DLSVTDLRFSSETGDSLSSLSAFRFGDDDT 412

Query: 175  -----------------IENG-----PLMRKNSDISLKNGRFSTTENNIQLANSPVCCST 288
                             I+N      P+  K+  ++ KN  F +T+N+ + ++SP C  T
Sbjct: 413  QVGKKSKLNSTPLQSEHIKNSWFCYEPIHSKDLLVASKNDCFPSTDNHTRYSSSPSCGFT 472

Query: 289  PPSHRGSIYVNGSSPEAILRSAAKNFKNTPSIIRKRTRETPKQDHNANYSNDVCMSEVRX 468
             P    S+ +N  SPE+ILRS+A +F+NTPSIIRKRT     +  + N+S+  C +  + 
Sbjct: 473  TPKVAQSVSINSRSPESILRSSAMSFRNTPSIIRKRT----SRKSSNNFSD--CSTPAQ- 525

Query: 469  XXXXXXXXXXPAWDNVLTGQDDLTSTQLLNVKWLSLSSPGVQAETDVALRSVEKRLEYAF 648
                      P   N   G+D  +S    N K   L +   + E  V+++++ + LEYAF
Sbjct: 526  --------TVPCTQN---GEDINSSKAFPNAK-QGLVASLCKPEAPVSVKTLGRCLEYAF 573

Query: 649  DLEWDK---KCRGSVTERDSIDVN 711
            D+EWD    KC  SV+   + DVN
Sbjct: 574  DMEWDPSRVKCGTSVSSTATPDVN 597


>emb|CAN82262.1| hypothetical protein VITISV_009280 [Vitis vinifera]
          Length = 579

 Score = 93.2 bits (230), Expect = 9e-17
 Identities = 81/264 (30%), Positives = 127/264 (48%), Gaps = 29/264 (10%)
 Frame = +1

Query: 7    CRSSHIAVPVATKRIPESPKRPRHYASPLHESGGMNSNFNIESSTLLPNLSLGCFG---- 174
            C      V + +K+  ESPKRP  Y     +    +  F+ E+   L +LS   FG    
Sbjct: 331  CNPPEAVVSLTSKQRLESPKRPWTY-----DLSVTDLRFSSETGDSLSSLSAFRFGDDDT 385

Query: 175  ------------IENG----------PLMRKNSDISLKNGRFSTTENNIQLANSPVCCST 288
                        +++G          P+  K+  ++ KN  F +T+N+ + ++SP C  T
Sbjct: 386  QVGKKSKLNSTPLQSGHIKHSWFCYEPIHLKDLLVASKNDCFPSTDNHTRYSSSPSCGFT 445

Query: 289  PPSHRGSIYVNGSSPEAILRSAAKNFKNTPSIIRKRTRETPKQDHNANYSNDVCMSEVRX 468
             P    S+ +N  SPE+ILRS+A +F+NTPSIIRKRT     +  + N+S+  C +  + 
Sbjct: 446  TPKVAQSVSINSRSPESILRSSAMSFRNTPSIIRKRT----SRKSSNNFSD--CSTPAQ- 498

Query: 469  XXXXXXXXXXPAWDNVLTGQDDLTSTQLLNVKWLSLSSPGVQAETDVALRSVEKRLEYAF 648
                      P   N   G+D  +S    N K   +SS   + E  V+++++ + LEYAF
Sbjct: 499  --------TVPCTQN---GEDINSSKAFPNAKQGFVSSL-CKPEAPVSVKTLGRCLEYAF 546

Query: 649  DLEWDK---KCRGSVTERDSIDVN 711
            D+EWD    KC  SV+   + DVN
Sbjct: 547  DMEWDPSRVKCGTSVSSTATPDVN 570


>ref|XP_002320778.1| predicted protein [Populus trichocarpa] gi|222861551|gb|EEE99093.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
 Frame = +1

Query: 190 LMRKNSDISLKNGRFSTTENNIQLANSPVCCSTPPSHRGSIYVNGSSPEAILRSAAKNFK 369
           L  K+ ++ L+ G F +++  I+    P   STP S R  +  + SSPE+ LRS A++FK
Sbjct: 400 LQLKDLNVFLETGSFPSSDCYIRTVGGPGSFSTPIS-RNRVSPSCSSPESRLRSKARSFK 458

Query: 370 NTPSIIRKRTRETPKQ------DHNANYSNDVCMSEVRXXXXXXXXXXXPAWDNVLTGQD 531
           +TPSIIRKR+  T +Q      D N   S   C S+                       D
Sbjct: 459 STPSIIRKRSSITLRQAGSSDKDDNGLRSLGSCSSD---------------------KDD 497

Query: 532 DLTSTQLLNVKWLSLSSP-GVQAETDVALRSVEKRLEYAFDLE 657
           D     LLN K L LS P   + ET   ++SVEKRLEYAF++E
Sbjct: 498 DDDDVDLLNKKQLFLSPPKSKKLETPEEMKSVEKRLEYAFNIE 540


>ref|XP_002336747.1| predicted protein [Populus trichocarpa] gi|222836653|gb|EEE75046.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 60/163 (36%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
 Frame = +1

Query: 190 LMRKNSDISLKNGRFSTTENNIQLANSPVCCSTPPSHRGSIYVNGSSPEAILRSAAKNFK 369
           L  K+ ++ L+ G F  ++  I+    P   STP S R  +  + SSPE+ LRS A++FK
Sbjct: 29  LQLKDLNVFLETGSFPGSDCYIRTVGGPGSFSTPIS-RNRVSPSCSSPESRLRSKARSFK 87

Query: 370 NTPSIIRKRTRETPKQ------DHNANYSNDVCMSEVRXXXXXXXXXXXPAWDNVLTGQD 531
           +TPSIIRKR+  T +Q      D N   S   C S+                       D
Sbjct: 88  STPSIIRKRSSITLRQAGSSDKDDNGLRSLGSCSSD---------------------KDD 126

Query: 532 DLTSTQLLNVKWLSLSSP-GVQAETDVALRSVEKRLEYAFDLE 657
           D     LLN K L LS P   + ET   ++SVEKRLEYAF++E
Sbjct: 127 DDDDVDLLNKKQLFLSPPKSKKLETPEEMKSVEKRLEYAFNIE 169


Top