BLASTX nr result

ID: Cimicifuga21_contig00018064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018064
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002886457.1| ATSCO1/ATSCO1/CPEF-G [Arabidopsis lyrata sub...    74   2e-11
ref|NP_564801.1| elongation factor EF-G [Arabidopsis thaliana] g...    72   5e-11
gb|AAK64040.1| unknown protein [Arabidopsis thaliana]                  72   5e-11
ref|XP_004162669.1| PREDICTED: LOW QUALITY PROTEIN: elongation f...    71   1e-10
ref|XP_004147612.1| PREDICTED: elongation factor G, chloroplasti...    71   1e-10

>ref|XP_002886457.1| ATSCO1/ATSCO1/CPEF-G [Arabidopsis lyrata subsp. lyrata]
           gi|297332298|gb|EFH62716.1| ATSCO1/ATSCO1/CPEF-G
           [Arabidopsis lyrata subsp. lyrata]
          Length = 782

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 45/92 (48%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
 Frame = -1

Query: 293 GRLQGYLLVNVR--VVRGPHHDVDSRVLAYRLAA**FIREEMEKASPRIVEFIMRVKFAT 120
           G L GY +V+VR  +V G +HDVDS VLA++LAA    RE M KA PR++E IMRV+  T
Sbjct: 638 GVLAGYPVVDVRACLVDGSYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPIMRVEVVT 697

Query: 119 LKRTWGAVTADLYSTGCWINIYGDKFGAFKII 24
            +   G V  DL S    IN +GDK G  K++
Sbjct: 698 PEEHLGDVIGDLNSRRGQINSFGDKPGGLKVV 729


>ref|NP_564801.1| elongation factor EF-G [Arabidopsis thaliana]
           gi|6630460|gb|AAF19548.1|AC007190_16 F23N19.11
           [Arabidopsis thaliana] gi|23297147|gb|AAN13104.1|
           unknown protein [Arabidopsis thaliana]
           gi|90855593|tpg|DAA05753.1| TPA_exp: elongation factor G
           [Arabidopsis thaliana] gi|332195879|gb|AEE34000.1|
           elongation factor EF-G [Arabidopsis thaliana]
          Length = 783

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 44/92 (47%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
 Frame = -1

Query: 293 GRLQGYLLVNVR--VVRGPHHDVDSRVLAYRLAA**FIREEMEKASPRIVEFIMRVKFAT 120
           G L G+ +V+VR  +V G +HDVDS VLA++LAA    RE M KA PR++E IMRV+  T
Sbjct: 639 GVLAGFPVVDVRACLVDGSYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPIMRVEVVT 698

Query: 119 LKRTWGAVTADLYSTGCWINIYGDKFGAFKII 24
            +   G V  DL S    IN +GDK G  K++
Sbjct: 699 PEEHLGDVIGDLNSRRGQINSFGDKPGGLKVV 730


>gb|AAK64040.1| unknown protein [Arabidopsis thaliana]
          Length = 783

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 44/92 (47%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
 Frame = -1

Query: 293 GRLQGYLLVNVR--VVRGPHHDVDSRVLAYRLAA**FIREEMEKASPRIVEFIMRVKFAT 120
           G L G+ +V+VR  +V G +HDVDS VLA++LAA    RE M KA PR++E IMRV+  T
Sbjct: 639 GVLAGFPVVDVRACLVDGSYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPIMRVEVVT 698

Query: 119 LKRTWGAVTADLYSTGCWINIYGDKFGAFKII 24
            +   G V  DL S    IN +GDK G  K++
Sbjct: 699 PEEHLGDVIGDLNSRRGQINSFGDKPGGLKVV 730


>ref|XP_004162669.1| PREDICTED: LOW QUALITY PROTEIN: elongation factor G,
           chloroplastic-like [Cucumis sativus]
          Length = 777

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
 Frame = -1

Query: 293 GRLQGYLLVNVR--VVRGPHHDVDSRVLAYRLAA**FIREEMEKASPRIVEFIMRVKFAT 120
           G L G+ +V+VR  +V G +HDVDS VLA++LAA    RE M KA PR++E IM+V+  T
Sbjct: 633 GVLAGFPVVDVRAVLVDGTYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPIMKVEVVT 692

Query: 119 LKRTWGAVTADLYSTGCWINIYGDKFGAFKII 24
            +   G V  DL S    IN +GDK G  K++
Sbjct: 693 PEEHLGDVIGDLNSRRGQINSFGDKPGGLKVV 724


>ref|XP_004147612.1| PREDICTED: elongation factor G, chloroplastic-like [Cucumis
           sativus]
          Length = 777

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
 Frame = -1

Query: 293 GRLQGYLLVNVR--VVRGPHHDVDSRVLAYRLAA**FIREEMEKASPRIVEFIMRVKFAT 120
           G L G+ +V+VR  +V G +HDVDS VLA++LAA    RE M KA PR++E IM+V+  T
Sbjct: 633 GVLAGFPVVDVRAVLVDGTYHDVDSSVLAFQLAARGAFREGMRKAGPRMLEPIMKVEVVT 692

Query: 119 LKRTWGAVTADLYSTGCWINIYGDKFGAFKII 24
            +   G V  DL S    IN +GDK G  K++
Sbjct: 693 PEEHLGDVIGDLNSRRGQINSFGDKPGGLKVV 724


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