BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018056
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]   184   6e-45
dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thali...   183   1e-44
ref|NP_001189933.1| Rad54-like protein [Arabidopsis thaliana] gi...   183   1e-44
ref|XP_002885300.1| hypothetical protein ARALYDRAFT_479436 [Arab...   183   1e-44
ref|NP_188552.3| Rad54-like protein [Arabidopsis thaliana] gi|11...   183   1e-44

>emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
          Length = 985

 Score =  184 bits (467), Expect = 6e-45
 Identities = 89/104 (85%), Positives = 95/104 (91%)
 Frame = +3

Query: 3   LLRQGFDGEPMVKKAIIVTPTSLVSNWESEIKKWVGDRVQPVALCESTRDDVLSGIDSFI 182
           LL QGFDG+PMVKKAIIVTPTSLVSNWE+EIKKWVG+RVQ VALCESTRDDV+ GIDSF 
Sbjct: 230 LLHQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVQLVALCESTRDDVVFGIDSFT 289

Query: 183 RPRSPFKVLIVSYETFRMHSSKFEKNGSCDLLICDEAHRLKNDQ 314
            P SP +VLIVSYETFRMHSSKF  +GSCDLLICDEAHRLKNDQ
Sbjct: 290 SPHSPLQVLIVSYETFRMHSSKFSHSGSCDLLICDEAHRLKNDQ 333


>dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thaliana]
          Length = 959

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/104 (85%), Positives = 96/104 (92%)
 Frame = +3

Query: 3   LLRQGFDGEPMVKKAIIVTPTSLVSNWESEIKKWVGDRVQPVALCESTRDDVLSGIDSFI 182
           LL QGFDG PMVKKAIIVTPTSLVSNWE+EIKKWVGDR+Q +ALCESTRDDVLSGIDSF 
Sbjct: 228 LLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFT 287

Query: 183 RPRSPFKVLIVSYETFRMHSSKFEKNGSCDLLICDEAHRLKNDQ 314
           RPRS  +VLI+SYETFRMHSSKF ++ SCDLLICDEAHRLKNDQ
Sbjct: 288 RPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQ 331


>ref|NP_001189933.1| Rad54-like protein [Arabidopsis thaliana]
           gi|332642688|gb|AEE76209.1| Rad54-like protein
           [Arabidopsis thaliana]
          Length = 908

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/104 (85%), Positives = 96/104 (92%)
 Frame = +3

Query: 3   LLRQGFDGEPMVKKAIIVTPTSLVSNWESEIKKWVGDRVQPVALCESTRDDVLSGIDSFI 182
           LL QGFDG PMVKKAIIVTPTSLVSNWE+EIKKWVGDR+Q +ALCESTRDDVLSGIDSF 
Sbjct: 228 LLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFT 287

Query: 183 RPRSPFKVLIVSYETFRMHSSKFEKNGSCDLLICDEAHRLKNDQ 314
           RPRS  +VLI+SYETFRMHSSKF ++ SCDLLICDEAHRLKNDQ
Sbjct: 288 RPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQ 331


>ref|XP_002885300.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp.
           lyrata] gi|297331140|gb|EFH61559.1| hypothetical protein
           ARALYDRAFT_479436 [Arabidopsis lyrata subsp. lyrata]
          Length = 910

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/104 (85%), Positives = 96/104 (92%)
 Frame = +3

Query: 3   LLRQGFDGEPMVKKAIIVTPTSLVSNWESEIKKWVGDRVQPVALCESTRDDVLSGIDSFI 182
           LL QGFDG PMVKKAIIVTPTSLVSNWE+EIKKWVGDR+Q +ALCESTRDDVLSGIDSF 
Sbjct: 228 LLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFT 287

Query: 183 RPRSPFKVLIVSYETFRMHSSKFEKNGSCDLLICDEAHRLKNDQ 314
           RPRS  +VLI+SYETFRMHSSKF ++ SCDLLICDEAHRLKNDQ
Sbjct: 288 RPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQ 331


>ref|NP_188552.3| Rad54-like protein [Arabidopsis thaliana]
           gi|112419506|dbj|BAF03042.1| Rad54 [Arabidopsis
           thaliana] gi|116518260|gb|ABJ99465.1| RAD54-like protein
           [Arabidopsis thaliana] gi|332642687|gb|AEE76208.1|
           Rad54-like protein [Arabidopsis thaliana]
          Length = 910

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/104 (85%), Positives = 96/104 (92%)
 Frame = +3

Query: 3   LLRQGFDGEPMVKKAIIVTPTSLVSNWESEIKKWVGDRVQPVALCESTRDDVLSGIDSFI 182
           LL QGFDG PMVKKAIIVTPTSLVSNWE+EIKKWVGDR+Q +ALCESTRDDVLSGIDSF 
Sbjct: 228 LLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDVLSGIDSFT 287

Query: 183 RPRSPFKVLIVSYETFRMHSSKFEKNGSCDLLICDEAHRLKNDQ 314
           RPRS  +VLI+SYETFRMHSSKF ++ SCDLLICDEAHRLKNDQ
Sbjct: 288 RPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQ 331