BLASTX nr result

ID: Cimicifuga21_contig00018038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018038
         (1183 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265452.1| PREDICTED: vacuolar iron transporter homolog...   108   3e-21
ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...   107   4e-21
emb|CBI20809.3| unnamed protein product [Vitis vinifera]              107   4e-21
emb|CAN69619.1| hypothetical protein VITISV_001620 [Vitis vinifera]   107   4e-21
emb|CBI20044.3| unnamed protein product [Vitis vinifera]              104   5e-20

>ref|XP_002265452.1| PREDICTED: vacuolar iron transporter homolog 4-like [Vitis vinifera]
          Length = 221

 Score =  108 bits (269), Expect = 3e-21
 Identities = 57/94 (60%), Positives = 65/94 (69%)
 Frame = -2

Query: 1182 ISVSLQGLVAGACSMAIGEFVSVYSQLDIELTQVKRGNRVTSDGESSKEENAKKRLPNPX 1003
            I     GLVAGACSMAIGEFVSVYSQLDIE+ Q KR  R    GES +EE  K+ LPNP 
Sbjct: 75   ILTGFAGLVAGACSMAIGEFVSVYSQLDIEVAQRKRDKRRVGSGESEEEEGEKENLPNPV 134

Query: 1002 XXXXXXXXAFLIGAMIPWLAAAFIREHKVRLGVM 901
                    AF +GAM+P LAA+FIRE+KVRLG +
Sbjct: 135  QAAAASALAFAVGAMVPLLAASFIREYKVRLGAV 168


>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score =  107 bits (268), Expect = 4e-21
 Identities = 50/76 (65%), Positives = 62/76 (81%)
 Frame = -1

Query: 229  VDPIKDVGGITLEGALDLLKYPLLLGNHPDDGLPVYLKIARSGFSVRHRHTIAPVPKTLD 50
            V  IKDVG ITLE AL+LL+YP+ LGNHP+D  PV LK+A++GFS+RHR TIAPVPK + 
Sbjct: 1090 VSHIKDVGSITLEDALELLRYPVTLGNHPNDDHPVVLKLAKNGFSIRHRRTIAPVPKNIK 1149

Query: 49   PKKVTIEKAMKLLLSK 2
            P  +T+EKA+KLLL K
Sbjct: 1150 PNDITLEKALKLLLGK 1165


>emb|CBI20809.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  107 bits (268), Expect = 4e-21
 Identities = 50/76 (65%), Positives = 62/76 (81%)
 Frame = -1

Query: 229  VDPIKDVGGITLEGALDLLKYPLLLGNHPDDGLPVYLKIARSGFSVRHRHTIAPVPKTLD 50
            V  IKDVG ITLE AL+LL+YP+ LGNHP+D  PV LK+A++GFS+RHR TIAPVPK + 
Sbjct: 922  VSHIKDVGSITLEDALELLRYPVTLGNHPNDDHPVVLKLAKNGFSIRHRRTIAPVPKNIK 981

Query: 49   PKKVTIEKAMKLLLSK 2
            P  +T+EKA+KLLL K
Sbjct: 982  PNDITLEKALKLLLGK 997


>emb|CAN69619.1| hypothetical protein VITISV_001620 [Vitis vinifera]
          Length = 672

 Score =  107 bits (268), Expect = 4e-21
 Identities = 50/76 (65%), Positives = 62/76 (81%)
 Frame = -1

Query: 229 VDPIKDVGGITLEGALDLLKYPLLLGNHPDDGLPVYLKIARSGFSVRHRHTIAPVPKTLD 50
           V  IKDVG ITLE AL+LL+YP+ LGNHP+D  PV LK+A++GFS+RHR TIAPVPK + 
Sbjct: 114 VSHIKDVGSITLEDALELLRYPVTLGNHPNDDHPVVLKLAKNGFSIRHRRTIAPVPKNIK 173

Query: 49  PKKVTIEKAMKLLLSK 2
           P  +T+EKA+KLLL K
Sbjct: 174 PNDITLEKALKLLLGK 189


>emb|CBI20044.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score =  104 bits (259), Expect = 5e-20
 Identities = 56/94 (59%), Positives = 66/94 (70%)
 Frame = -2

Query: 1182 ISVSLQGLVAGACSMAIGEFVSVYSQLDIELTQVKRGNRVTSDGESSKEENAKKRLPNPX 1003
            I     GLVAGACSMAIGEFVSVY+QLDIEL Q+KR  R   D   ++E+   ++LPNP 
Sbjct: 124  ILAGFAGLVAGACSMAIGEFVSVYTQLDIELAQMKRDKR-RRDSTENEEKTENEKLPNPF 182

Query: 1002 XXXXXXXXAFLIGAMIPWLAAAFIREHKVRLGVM 901
                    +F +GAMIP LAAAFIREHKVRLGV+
Sbjct: 183  QAGIASALSFALGAMIPLLAAAFIREHKVRLGVV 216


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