BLASTX nr result

ID: Cimicifuga21_contig00018030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018030
         (1514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510750.1| protein with unknown function [Ricinus commu...   347   5e-93
ref|XP_002307009.1| predicted protein [Populus trichocarpa] gi|1...   344   4e-92
ref|XP_002301890.1| predicted protein [Populus trichocarpa] gi|2...   343   7e-92
ref|XP_002277078.1| PREDICTED: uncharacterized protein LOC100246...   340   8e-91
emb|CAN67639.1| hypothetical protein VITISV_044258 [Vitis vinifera]   340   8e-91

>ref|XP_002510750.1| protein with unknown function [Ricinus communis]
            gi|223551451|gb|EEF52937.1| protein with unknown function
            [Ricinus communis]
          Length = 235

 Score =  347 bits (890), Expect = 5e-93
 Identities = 169/236 (71%), Positives = 195/236 (82%), Gaps = 5/236 (2%)
 Frame = -2

Query: 1198 DLGPPWLKPMLKANYFIPCEFHGDSNKSECNMFCLDCMGNALCSYCLTHHRDHHIVQIRR 1019
            DLGPPWL+PML+A+YF+PC FHGDSNKSECN+FCLDCMGNALCSYCL +H+DH IVQIRR
Sbjct: 12   DLGPPWLRPMLRASYFVPCSFHGDSNKSECNLFCLDCMGNALCSYCLINHKDHRIVQIRR 71

Query: 1018 SSYHNVIRVNEAQKYLDLSAVQTYVINSAKIVFLNERPQPRPGKGVTNTCEICCRSLPDP 839
            SSYHNV+RVNE QKY+D+S VQTY+INSAKIVFLNERPQPRPGKGVTNTCEICCRSL D 
Sbjct: 72   SSYHNVVRVNEIQKYIDISCVQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDS 131

Query: 838  FRFCSLGCKLGGMKRGDHELTFNLRTKHIRD---GVFDSDDCSTPKKIARTSAFNRFFFV 668
            FRFCSLGCKLGGMKRGD +LTF LR KH RD   G  +SD+ STPKKI +T AFNR   +
Sbjct: 132  FRFCSLGCKLGGMKRGDPDLTFTLRMKHNRDPFLGGSESDESSTPKKIRKTHAFNR--LM 189

Query: 667  DGPQMPQNSISAEAYNNKCTSYSGDEAGNDLSPATPPITSNR--RRRKGIPHRAPF 506
            DG  +     S++ ++      SGDEA  ++SP+TPPI ++R  RRRKGIPHRAPF
Sbjct: 190  DGLSI----YSSDGHS------SGDEATTNISPSTPPIYNHRNARRRKGIPHRAPF 235


>ref|XP_002307009.1| predicted protein [Populus trichocarpa] gi|118489570|gb|ABK96587.1|
            unknown [Populus trichocarpa x Populus deltoides]
            gi|222856458|gb|EEE94005.1| predicted protein [Populus
            trichocarpa]
          Length = 238

 Score =  344 bits (882), Expect = 4e-92
 Identities = 165/236 (69%), Positives = 188/236 (79%), Gaps = 5/236 (2%)
 Frame = -2

Query: 1198 DLGPPWLKPMLKANYFIPCEFHGDSNKSECNMFCLDCMGNALCSYCLTHHRDHHIVQIRR 1019
            D+GPPWL PML+A+YFIPC  HG+SNKSECNMFCLDCMGNA CSYCL +H+DH +VQIRR
Sbjct: 12   DMGPPWLIPMLRASYFIPCGVHGESNKSECNMFCLDCMGNAFCSYCLIYHKDHRVVQIRR 71

Query: 1018 SSYHNVIRVNEAQKYLDLSAVQTYVINSAKIVFLNERPQPRPGKGVTNTCEICCRSLPDP 839
            SSYHNV+RVNE QKY+D+S VQTY+INSAKIVFLNERPQPRPGKGVTNTCEICCRSL D 
Sbjct: 72   SSYHNVVRVNEIQKYIDISCVQTYIINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDS 131

Query: 838  FRFCSLGCKLGGMKRGDHELTFNLRTKHIRDGVF---DSDDCSTPKKIARTSAFNRFFFV 668
            FRFCSLGCKLGGMKRGD +LTF ++ KH RD  F   +SD+ STPKKI RT AFNR    
Sbjct: 132  FRFCSLGCKLGGMKRGDPDLTFAVKLKHNRDPFFGGSESDESSTPKKIRRTHAFNRL--- 188

Query: 667  DGPQMPQNSISAEAYNNKCTSYSGDEAGNDLSPATPPITSNR--RRRKGIPHRAPF 506
                     +S  + NN     SGD+A  ++SPATPPI ++R  RRRKGIPHRAPF
Sbjct: 189  ------MEGLSIYSSNNDGAESSGDDAATNISPATPPIFNHRNARRRKGIPHRAPF 238


>ref|XP_002301890.1| predicted protein [Populus trichocarpa] gi|222843616|gb|EEE81163.1|
            predicted protein [Populus trichocarpa]
          Length = 238

 Score =  343 bits (880), Expect = 7e-92
 Identities = 168/244 (68%), Positives = 192/244 (78%), Gaps = 5/244 (2%)
 Frame = -2

Query: 1222 PMEEKDDVDLGPPWLKPMLKANYFIPCEFHGDSNKSECNMFCLDCMGNALCSYCLTHHRD 1043
            P  +  + D GPPWL PML+A+YFIPC  HG+SNKSECNMFCLDCMGNA CSYCL +HRD
Sbjct: 4    PFGQMRNHDTGPPWLIPMLRASYFIPCAVHGESNKSECNMFCLDCMGNAFCSYCLIYHRD 63

Query: 1042 HHIVQIRRSSYHNVIRVNEAQKYLDLSAVQTYVINSAKIVFLNERPQPRPGKGVTNTCEI 863
            H +VQIRRSSYHNV+RVNE QKY+D+S VQTY+INSAKIVFLNERPQPRPGKGVTNTCEI
Sbjct: 64   HRVVQIRRSSYHNVVRVNEIQKYIDISCVQTYIINSAKIVFLNERPQPRPGKGVTNTCEI 123

Query: 862  CCRSLPDPFRFCSLGCKLGGMKRGDHELTFNLRTKHIRDGVF---DSDDCSTPKKIARTS 692
            CCRSL D FRFCSLGCKLGGMKRGD +LTF L+ K  RD  F   +SD+ STPKKI RT 
Sbjct: 124  CCRSLLDSFRFCSLGCKLGGMKRGDPDLTFALKLKQNRDPFFGGSESDESSTPKKIRRTH 183

Query: 691  AFNRFFFVDGPQMPQNSISAEAYNNKCTSYSGDEAGNDLSPATPPITSNR--RRRKGIPH 518
            AFNR   +DG       +S  + NN     SGD+A  ++SPATPP+ ++R  RRRKGIPH
Sbjct: 184  AFNR--LMDG-------LSIYSSNNDGAESSGDDAATNISPATPPLFNHRNARRRKGIPH 234

Query: 517  RAPF 506
            RAPF
Sbjct: 235  RAPF 238


>ref|XP_002277078.1| PREDICTED: uncharacterized protein LOC100246080 [Vitis vinifera]
          Length = 247

 Score =  340 bits (871), Expect = 8e-91
 Identities = 166/236 (70%), Positives = 189/236 (80%), Gaps = 6/236 (2%)
 Frame = -2

Query: 1195 LGPPWLKPMLKANYFIPCEFHGDSNKSECNMFCLDCMGNALCSYCLTHHRDHHIVQIRRS 1016
            LGPPWLKPML+A+YF+PC  HGDSNKSECNMFCLDCMG+ALCSYCL HH+DH +VQIRRS
Sbjct: 13   LGPPWLKPMLRASYFVPCGIHGDSNKSECNMFCLDCMGDALCSYCLIHHKDHCVVQIRRS 72

Query: 1015 SYHNVIRVNEAQKYLDLSAVQTYVINSAKIVFLNERPQPRPGKGVTNTCEICCRSLPDPF 836
            SYHNV+RVNE QKY+D+S VQTYVINSAKIVFLNERPQPRPGKGVTNTCEICCRSL D F
Sbjct: 73   SYHNVVRVNEIQKYIDISCVQTYVINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDSF 132

Query: 835  RFCSLGCKLGGMKRGDHELTFNLRTKHIRDGVF--DSDDCSTPKKIARTSAFNRFFFVDG 662
            RFCSLGCKLG MKRGD +LTF L+ KH R+     +SD+ STP+K  RT  F+R   +DG
Sbjct: 133  RFCSLGCKLGAMKRGDPDLTFWLKLKHGRETFHGSESDESSTPRKFQRTHLFSR-LMIDG 191

Query: 661  P--QMPQNSISAEAYNNKCTSYSGDEAGNDLSPATPPI--TSNRRRRKGIPHRAPF 506
            P   +  +  +  A +    S SGDE  N++SPATPPI   SN RRRKGIPHRAPF
Sbjct: 192  PTISLDGHHDATVAADKSTASSSGDETINNISPATPPIFNHSNARRRKGIPHRAPF 247


>emb|CAN67639.1| hypothetical protein VITISV_044258 [Vitis vinifera]
          Length = 240

 Score =  340 bits (871), Expect = 8e-91
 Identities = 166/236 (70%), Positives = 189/236 (80%), Gaps = 6/236 (2%)
 Frame = -2

Query: 1195 LGPPWLKPMLKANYFIPCEFHGDSNKSECNMFCLDCMGNALCSYCLTHHRDHHIVQIRRS 1016
            LGPPWLKPML+A+YF+PC  HGDSNKSECNMFCLDCMG+ALCSYCL HH+DH +VQIRRS
Sbjct: 6    LGPPWLKPMLRASYFVPCGIHGDSNKSECNMFCLDCMGDALCSYCLIHHKDHCVVQIRRS 65

Query: 1015 SYHNVIRVNEAQKYLDLSAVQTYVINSAKIVFLNERPQPRPGKGVTNTCEICCRSLPDPF 836
            SYHNV+RVNE QKY+D+S VQTYVINSAKIVFLNERPQPRPGKGVTNTCEICCRSL D F
Sbjct: 66   SYHNVVRVNEIQKYIDISCVQTYVINSAKIVFLNERPQPRPGKGVTNTCEICCRSLLDSF 125

Query: 835  RFCSLGCKLGGMKRGDHELTFNLRTKHIRDGVF--DSDDCSTPKKIARTSAFNRFFFVDG 662
            RFCSLGCKLG MKRGD +LTF L+ KH R+     +SD+ STP+K  RT  F+R   +DG
Sbjct: 126  RFCSLGCKLGAMKRGDPDLTFWLKLKHGRETFHGSESDESSTPRKFQRTHLFSR-LMIDG 184

Query: 661  P--QMPQNSISAEAYNNKCTSYSGDEAGNDLSPATPPI--TSNRRRRKGIPHRAPF 506
            P   +  +  +  A +    S SGDE  N++SPATPPI   SN RRRKGIPHRAPF
Sbjct: 185  PTISLDGHHDATVAADKSTASSSGDETINNISPATPPIFNHSNARRRKGIPHRAPF 240


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