BLASTX nr result

ID: Cimicifuga21_contig00018025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018025
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267650.2| PREDICTED: ABC transporter C family member 1...   193   4e-47
emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]   189   6e-46
ref|XP_002266842.2| PREDICTED: ABC transporter C family member 1...   171   1e-40
ref|XP_002331826.1| multidrug resistance protein ABC transporter...   167   2e-39
emb|CBI22551.3| unnamed protein product [Vitis vinifera]              151   2e-34

>ref|XP_002267650.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1532

 Score =  193 bits (490), Expect = 4e-47
 Identities = 110/250 (44%), Positives = 140/250 (56%), Gaps = 20/250 (8%)
 Frame = -2

Query: 690 ELEDVWRNVFCGETLACPGKGCGS----------CINHTXXXXXXXXXXXXXXXXXFRKP 541
           ++ D+W  +FCGE       GC S          C NH                   ++ 
Sbjct: 52  KMGDLW-TMFCGEPSCLDSGGCSSEFIFFNHPSSCANHALTVCFDILLFVMFLFTMIQRT 110

Query: 540 TTTM-----RFHRFSRLEILSAVFNGCIGLVYLGLGIWMLEENLRRFNTAVPLHSWFVAL 376
           ++       +F RFS L+I SA+FNGC+GLVYLGLG+W+LEENLR+    +PLH W + L
Sbjct: 111 SSKPVHVPGQFQRFSPLQISSAIFNGCLGLVYLGLGVWILEENLRKTQIVLPLHWWLLPL 170

Query: 375 FQGGTWLFVSLTVSLGGKRLSRGFVSVWSIFACLYAGILCVFALLDDI-----SIRIVXX 211
            QG TWL V L VSL G+ L R  + + SI A L++GI  V ++   I     S+ IV  
Sbjct: 171 LQGFTWLLVGLMVSLRGQYLPRSPLRILSILAFLFSGITGVLSIFSAIVYKEASVEIVLN 230

Query: 210 XXXXXXXXXXXLCVYKMFKAEDNGKSVNDKGLYTPLNGEADGSSKIDSDGNVTLFAKAGW 31
                      LC YK +K E+  K VN  GLYTPLNGEADGS+K DS G+VT FAKAG+
Sbjct: 231 VLSLPGAILLLLCAYKGYKYEETDKIVNGSGLYTPLNGEADGSAKTDSVGDVTPFAKAGF 290

Query: 30  FSRMSFWWLN 1
           FS MSFWWLN
Sbjct: 291 FSSMSFWWLN 300


>emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]
          Length = 1480

 Score =  189 bits (480), Expect = 6e-46
 Identities = 109/247 (44%), Positives = 136/247 (55%), Gaps = 20/247 (8%)
 Frame = -2

Query: 681 DVWRNVFCGETLACPGKGCGS----------CINHTXXXXXXXXXXXXXXXXXFRKPTTT 532
           D+W   FCGE       GC S          C NH                   ++ ++ 
Sbjct: 3   DLW-TXFCGEPSCLDSGGCSSEFIFFNHPSSCANHALTVCFDILLFVMFLFTMIQRTSSK 61

Query: 531 M-----RFHRFSRLEILSAVFNGCIGLVYLGLGIWMLEENLRRFNTAVPLHSWFVALFQG 367
                 +F RFS L+I SA+FNGC+GLVYL LG+W+LEENLR+    +PLH W + L QG
Sbjct: 62  PVHVPGQFQRFSPLQISSAIFNGCLGLVYLXLGVWILEENLRKTQIVLPLHWWLLPLLQG 121

Query: 366 GTWLFVSLTVSLGGKRLSRGFVSVWSIFACLYAGILCVFALLDDI-----SIRIVXXXXX 202
            TWL V L VSL G+ L R  + + SI A L++GI  V ++   I     S+ IV     
Sbjct: 122 FTWLLVGLMVSLRGQYLPRSPLRILSILAFLFSGITGVLSIFSAIVYKEASVEIVLNVLS 181

Query: 201 XXXXXXXXLCVYKMFKAEDNGKSVNDKGLYTPLNGEADGSSKIDSDGNVTLFAKAGWFSR 22
                   LC YK +K E+  K VN  GLYTPLNGEADGS+K DS G+VT FAKAG+FS 
Sbjct: 182 LPGAILLLLCAYKGYKYEETDKIVNGSGLYTPLNGEADGSAKTDSVGDVTPFAKAGFFSS 241

Query: 21  MSFWWLN 1
           MSFWWLN
Sbjct: 242 MSFWWLN 248


>ref|XP_002266842.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1483

 Score =  171 bits (434), Expect = 1e-40
 Identities = 101/250 (40%), Positives = 134/250 (53%), Gaps = 23/250 (9%)
 Frame = -2

Query: 681 DVWRNVFCGETLACPGKGC-------------GSCINHTXXXXXXXXXXXXXXXXXFRKP 541
           D+W  +FCGE+  C   G               SCINH                   +K 
Sbjct: 3   DLW-TLFCGES-NCSDTGRRTSSFSFAVFASPSSCINHAFLVCFDILLLAMFVSNMIQKA 60

Query: 540 TTTM-----RFHRFSRLEILSAVFNGCIGLVYLGLGIWMLEENLRRFNTAVPLHSWFVAL 376
            +       RF  FS L+I+SAVFNGC+G VYL LGIW+LEE LR+ ++  PLH W + L
Sbjct: 61  LSKRVRIPPRFQGFSPLQIISAVFNGCLGSVYLSLGIWILEEKLRKTHSVFPLHWWILLL 120

Query: 375 FQGGTWLFVSLTVSLGGKRLSRGFVSVWSIFACLYAGILCVFALL-----DDISIRIVXX 211
           F G TWL ++L VSL G+ LS+    V SIFA L AG +CVF+L       ++S++    
Sbjct: 121 FHGFTWLILALIVSLWGRHLSKAPFRVLSIFAFLLAGTICVFSLSPAIVNKEVSLKTTLD 180

Query: 210 XXXXXXXXXXXLCVYKMFKAEDNGKSVNDKGLYTPLNGEADGSSKIDSDGNVTLFAKAGW 31
                       CV+K +K +++ ++VN  GLYTPL  E  G+S+ DS    T FA AG+
Sbjct: 181 VLSFPGASLLIACVFKDYKDDESEETVNGSGLYTPLKEETPGNSEADSGSFATPFATAGF 240

Query: 30  FSRMSFWWLN 1
           FSRM FWWLN
Sbjct: 241 FSRMFFWWLN 250


>ref|XP_002331826.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222875064|gb|EEF12195.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1423

 Score =  167 bits (424), Expect = 2e-39
 Identities = 91/183 (49%), Positives = 116/183 (63%), Gaps = 5/183 (2%)
 Frame = -2

Query: 534 TMRFHRFSRLEILSAVFNGCIGLVYLGLGIWMLEENLRRFNTAVPLHSWFVALFQGGTWL 355
           T RF  +S L+I+S + NG IG VYL LGIW+LEE LR+  T +PL SW V LFQG TWL
Sbjct: 14  TPRFRGYSSLQIVSVILNGGIGFVYLCLGIWILEEKLRKNQTVLPLRSWLVVLFQGFTWL 73

Query: 354 FVSLTVSLGGKRLSRGFVSVWSIFACLYAGILCVFALLDDI-----SIRIVXXXXXXXXX 190
            V LT+SL GK L R  + + SI A L AGI+C  ++ + I      +RI          
Sbjct: 74  LVGLTISLLGKHLQRTPLRLLSILASLLAGIVCALSIYNAILGEGMLVRIALDVLSFPGA 133

Query: 189 XXXXLCVYKMFKAEDNGKSVNDKGLYTPLNGEADGSSKIDSDGNVTLFAKAGWFSRMSFW 10
               LCVYK++K E N     ++ +Y PLNGEA+G SKI+S   VT FAKAG+F++MSFW
Sbjct: 134 ILLLLCVYKVYKHEGN----EERDMYAPLNGEANGVSKINSVNQVTPFAKAGFFNKMSFW 189

Query: 9   WLN 1
           WLN
Sbjct: 190 WLN 192


>emb|CBI22551.3| unnamed protein product [Vitis vinifera]
          Length = 1395

 Score =  151 bits (381), Expect = 2e-34
 Identities = 96/247 (38%), Positives = 122/247 (49%), Gaps = 20/247 (8%)
 Frame = -2

Query: 681 DVWRNVFCGETLACPGKGCGS----------CINHTXXXXXXXXXXXXXXXXXFRKPTTT 532
           D+W  +FCGE       GC S          C NH                   ++ ++ 
Sbjct: 3   DLW-TMFCGEPSCLDSGGCSSEFIFFNHPSSCANHALTVCFDILLFVMFLFTMIQRTSSK 61

Query: 531 M-----RFHRFSRLEILSAVFNGCIGLVYLGLGIWMLEENLRRFNTAVPLHSWFVALFQG 367
                 +F RFS L+I SA+FNGC+GLVYLGLG+W+LEENLR+    +PLH W       
Sbjct: 62  PVHVPGQFQRFSPLQISSAIFNGCLGLVYLGLGVWILEENLRKTQIVLPLH-W------- 113

Query: 366 GTWLFVSLTVSLGGKRLSRGFVSVWSIFACLYAGILCVFALLDDI-----SIRIVXXXXX 202
                                + + SI A L++GI  V ++   I     S+ IV     
Sbjct: 114 -------------------SPLRILSILAFLFSGITGVLSIFSAIVYKEASVEIVLNVLS 154

Query: 201 XXXXXXXXLCVYKMFKAEDNGKSVNDKGLYTPLNGEADGSSKIDSDGNVTLFAKAGWFSR 22
                   LC YK +K E+  K VN  GLYTPLNGEADGS+K DS G+VT FAKAG+FS 
Sbjct: 155 LPGAILLLLCAYKGYKYEETDKIVNGSGLYTPLNGEADGSAKTDSVGDVTPFAKAGFFSS 214

Query: 21  MSFWWLN 1
           MSFWWLN
Sbjct: 215 MSFWWLN 221


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