BLASTX nr result
ID: Cimicifuga21_contig00018023
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00018023 (1159 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002300362.1| multidrug resistance protein ABC transporter... 63 2e-16 ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3... 72 3e-10 ref|XP_003519622.1| PREDICTED: ABC transporter C family member 3... 71 5e-10 ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3... 71 5e-10 ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3... 70 1e-09 >ref|XP_002300362.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] gi|222847620|gb|EEE85167.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] Length = 1488 Score = 63.2 bits (152), Expect(2) = 2e-16 Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 12/103 (11%) Frame = +3 Query: 576 LLIHGFSSAFHXXXXXXXSVYWVFKNLNN-----------KNENRSLYHKITVFSCVALS 722 + + GF+++ H V +V K L N R ++K T+F + +S Sbjct: 12 IFLRGFTASLHLVLLLALFVSFVLKKLRVGDGVQGSKERFSNNKRFFFYKQTLFCSLGVS 71 Query: 723 ICHLLLCVVNYFYFCTV-WSQDKIVTQLDLVLTTLAWLAISAY 848 +L+L +V+YFY+ T WS DK+VT LD VLT L+W A+S Y Sbjct: 72 SLNLVLSLVSYFYWYTNGWSDDKLVTLLDFVLTALSWAALSVY 114 Score = 50.1 bits (118), Expect(2) = 2e-16 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = +2 Query: 968 YYSRPLKFPIFLRIWWVFFFIMSCYCLVSDL----NHHFLPTHLWIKDVLSFVMGFIFLY 1135 + S KFP LR+WW FF +SCYCLV D H + D++S F Y Sbjct: 120 FNSGETKFPFLLRVWWALFFSISCYCLVVDFLVFHKHGSFEIQYLVSDLVSVFTAFFLCY 179 Query: 1136 YG 1141 G Sbjct: 180 VG 181 >ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera] Length = 1488 Score = 72.0 bits (175), Expect = 3e-10 Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 6/97 (6%) Frame = +3 Query: 576 LLIHGFSSAFHXXXXXXXSVYWVFKNLN-----NKNENRSLYHKITVFSCVALSICHLLL 740 + + FS++ H V WV K +N N R LY+K T C LS+ + L Sbjct: 14 VFLRAFSASLHLVLLLLLFVSWVCKRINGGALENYKRTRFLYYKQTFACCQGLSLLNFFL 73 Query: 741 CVVNYFY-FCTVWSQDKIVTQLDLVLTTLAWLAISAY 848 C +NYFY + WS +K+VT LDLVL TL+W A+S Y Sbjct: 74 CFLNYFYWYRNGWSGEKLVTLLDLVLRTLSWGAVSVY 110 >ref|XP_003519622.1| PREDICTED: ABC transporter C family member 3-like [Glycine max] Length = 1493 Score = 71.2 bits (173), Expect = 5e-10 Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 8/103 (7%) Frame = +3 Query: 546 YIQRMVLYLFLLIHGFSSAFHXXXXXXXSVYWVFKNL-------NNKNENRSLYHKITVF 704 ++ VL + +HG S H + WV++ + K N SL+ K TVF Sbjct: 8 HLSTAVLLKPIFLHGLSGFLHLLLLVAVVLSWVWRKFTAGPGDESKKKPNNSLF-KTTVF 66 Query: 705 SCVALSICHLLLCVVNYFYFCTV-WSQDKIVTQLDLVLTTLAW 830 S +ALS + LLC +NYFY+ T WS++K+VT LDL L TLAW Sbjct: 67 SSLALSAFNFLLCFINYFYWYTSGWSEEKLVTLLDLALKTLAW 109 >ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3-like [Glycine max] Length = 2054 Score = 71.2 bits (173), Expect = 5e-10 Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 8/103 (7%) Frame = +3 Query: 546 YIQRMVLYLFLLIHGFSSAFHXXXXXXXSVYWVFKNL-------NNKNENRSLYHKITVF 704 ++ VL + +HG S H + WV++ + K N SL+ K TVF Sbjct: 569 HLSTAVLLKPIFLHGLSGFLHLLLLVAVVLSWVWRKFTAGPGDESKKKPNNSLF-KTTVF 627 Query: 705 SCVALSICHLLLCVVNYFYFCTV-WSQDKIVTQLDLVLTTLAW 830 S +ALS + LLC +NYFY+ T WS++K+VT LDL L TLAW Sbjct: 628 SSLALSAFNFLLCFINYFYWYTSGWSEEKLVTLLDLALKTLAW 670 >ref|XP_003634755.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera] Length = 1488 Score = 70.1 bits (170), Expect = 1e-09 Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 6/92 (6%) Frame = +3 Query: 591 FSSAFHXXXXXXXSVYWVFKNLN-----NKNENRSLYHKITVFSCVALSICHLLLCVVNY 755 FS++ H V WV K + N R LY+K T C LS+ +LLLC +NY Sbjct: 19 FSASLHLVLLLLLFVSWVCKRIKGGAPENCKRTRFLYYKQTFACCQGLSLLNLLLCFLNY 78 Query: 756 FY-FCTVWSQDKIVTQLDLVLTTLAWLAISAY 848 FY + WS +++VT LDLVL TLAW A+ Y Sbjct: 79 FYWYRNGWSDERLVTLLDLVLRTLAWGAVCVY 110