BLASTX nr result

ID: Cimicifuga21_contig00018016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018016
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309968.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002531675.1| poly-A binding protein, putative [Ricinus co...   117   7e-25
ref|XP_002306300.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-l...   115   3e-24
gb|ACU19123.1| unknown [Glycine max]                                  115   3e-24

>ref|XP_002309968.1| predicted protein [Populus trichocarpa] gi|222852871|gb|EEE90418.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  120 bits (301), Expect = 1e-25
 Identities = 66/106 (62%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
 Frame = +2

Query: 71  MDEEEHEVYGGDIPD-EGDMEDHNVVDVDMARADEDAAKLQXXXXXXXXXXXXXXXXXXX 247
           M+EEEHEVYGG+IPD EGDM+ HN  DVDM+ A++DA K                     
Sbjct: 1   MEEEEHEVYGGEIPDVEGDMDPHNA-DVDMSAAEDDAVK--ELDEMKKRLKEMEEEAAAL 57

Query: 248 XXXQAKVEKEMGAVPDPANTAATQANKEEVDSRSVFVGNVDYACTP 385
              QAKVEKEMGAVPDPA+ AA QANKEE DSRSVFVGNVDYACTP
Sbjct: 58  REMQAKVEKEMGAVPDPASAAANQANKEEADSRSVFVGNVDYACTP 103


>ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
           gi|223528706|gb|EEF30719.1| poly-A binding protein,
           putative [Ricinus communis]
          Length = 218

 Score =  117 bits (294), Expect = 7e-25
 Identities = 65/106 (61%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
 Frame = +2

Query: 71  MDEEEHEVYGGDIPD-EGDMEDHNVVDVDMARADEDAAKLQXXXXXXXXXXXXXXXXXXX 247
           M+EEEHEVYGG+IPD EGD++ HNV D+DM+ AD+DA K                     
Sbjct: 1   MEEEEHEVYGGEIPDMEGDIDPHNV-DMDMSAADDDAVK--ELDEMKKRLKEMEEEAAAL 57

Query: 248 XXXQAKVEKEMGAVPDPANTAATQANKEEVDSRSVFVGNVDYACTP 385
              QAKVEKEMGAV DPA+ AA QANKEE DSRSVFVGNVDYACTP
Sbjct: 58  REMQAKVEKEMGAVQDPASAAANQANKEETDSRSVFVGNVDYACTP 103


>ref|XP_002306300.1| predicted protein [Populus trichocarpa] gi|222855749|gb|EEE93296.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  117 bits (293), Expect = 1e-24
 Identities = 65/106 (61%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
 Frame = +2

Query: 71  MDEEEHEVYGGDIPD-EGDMEDHNVVDVDMARADEDAAKLQXXXXXXXXXXXXXXXXXXX 247
           M+EEEHEVYGG+IPD EGDM+ HN  DVDM+ AD+DA K                     
Sbjct: 1   MEEEEHEVYGGEIPDVEGDMDPHNA-DVDMSAADDDAVK--ELDEMKKRLKEMEEEAAAL 57

Query: 248 XXXQAKVEKEMGAVPDPANTAATQANKEEVDSRSVFVGNVDYACTP 385
              QAKVEKEMGAV DPA  AA QAN+EE DSRSVFVGNVDYACTP
Sbjct: 58  REMQAKVEKEMGAVQDPATAAANQANREEADSRSVFVGNVDYACTP 103


>ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
          Length = 215

 Score =  115 bits (289), Expect = 3e-24
 Identities = 61/105 (58%), Positives = 74/105 (70%)
 Frame = +2

Query: 71  MDEEEHEVYGGDIPDEGDMEDHNVVDVDMARADEDAAKLQXXXXXXXXXXXXXXXXXXXX 250
           M+EEEHEVYGG+IPDEG+ME     D+DM+ AD+DAA ++                    
Sbjct: 1   MEEEEHEVYGGEIPDEGEMEG----DIDMSAADDDAA-VKELDEMKRRLKEMEEEAAALR 55

Query: 251 XXQAKVEKEMGAVPDPANTAATQANKEEVDSRSVFVGNVDYACTP 385
             QAKV+KE+G+V DPAN+AA+QANKEE DSRSVFVGNVDYACTP
Sbjct: 56  EMQAKVDKEIGSVQDPANSAASQANKEEADSRSVFVGNVDYACTP 100


>gb|ACU19123.1| unknown [Glycine max]
          Length = 205

 Score =  115 bits (289), Expect = 3e-24
 Identities = 61/105 (58%), Positives = 74/105 (70%)
 Frame = +2

Query: 71  MDEEEHEVYGGDIPDEGDMEDHNVVDVDMARADEDAAKLQXXXXXXXXXXXXXXXXXXXX 250
           M+EEEHEVYGG+IPDEG+ME     D+DM+ AD+DAA ++                    
Sbjct: 1   MEEEEHEVYGGEIPDEGEMEG----DIDMSAADDDAA-VKELDEMKRRLKEMEEEAAALR 55

Query: 251 XXQAKVEKEMGAVPDPANTAATQANKEEVDSRSVFVGNVDYACTP 385
             QAKV+KE+G+V DPAN+AA+QANKEE DSRSVFVGNVDYACTP
Sbjct: 56  EMQAKVDKEIGSVQDPANSAASQANKEEADSRSVFVGNVDYACTP 100


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