BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018010
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat...   431   e-118
ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat...   421   e-115
ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat...   421   e-115
ref|XP_002515231.1| pentatricopeptide repeat-containing protein,...   421   e-115
ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|2...   407   e-111

>ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Vitis vinifera]
          Length = 526

 Score =  431 bits (1107), Expect = e-118
 Identities = 201/269 (74%), Positives = 241/269 (89%)
 Frame = +3

Query: 3   LKRVRFSHSNPLQVLEFFNYTARKREFFHTQYSYDTMLYVLGRSRKFDNIWEVLAEMRRK 182
           LKRVRFSH NP Q L FFNYT +++ F+HT +S DTMLY+LGRSR+FD IWE+L +MRRK
Sbjct: 96  LKRVRFSHGNPFQALAFFNYTNKRKGFYHTPFSLDTMLYILGRSRRFDQIWELLVDMRRK 155

Query: 183 DRTLITPRTVQIVLGRIAKVCSLRQTIESFRKFRKLVSQFDTSTSYYNALLRTLCQEKSM 362
           D++LI+PR+VQ+VLGRIAKVCS++QT+ESFRKF+KLV +FDT+   +NALLRTLCQEKSM
Sbjct: 156 DQSLISPRSVQVVLGRIAKVCSVKQTVESFRKFKKLVPEFDTAC--FNALLRTLCQEKSM 213

Query: 363 SDARNAYHSLKHEFKANLQTFNILLSGWKSSDEAEGFFDEMLALGVKPDVVSYNCLVDVY 542
            DARN YHSLKH+F+ +L+TFNILLSGWKS++EAEGFFDEM  +GV+PDVVSYNCL+DVY
Sbjct: 214 RDARNVYHSLKHDFRPDLRTFNILLSGWKSAEEAEGFFDEMREMGVEPDVVSYNCLIDVY 273

Query: 543 CKGREIDKAFKVVEKMRGEEITPDVYTYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDT 722
           CKGREI++A+KV++KMR E+I+PDV +YTSIIGGLGLVGQPDKARDVLKEMKEYGCYPD 
Sbjct: 274 CKGREIERAYKVIDKMRDEQISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDV 333

Query: 723 PAYNAVIRNFCIAKRLGDAYNMMDEMICK 809
            AYNA IRNFCIA RLGDA  +MDEM+ K
Sbjct: 334 AAYNAAIRNFCIANRLGDADGLMDEMVGK 362


>ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score =  421 bits (1081), Expect = e-115
 Identities = 202/269 (75%), Positives = 234/269 (86%)
 Frame = +3

Query: 3   LKRVRFSHSNPLQVLEFFNYTARKREFFHTQYSYDTMLYVLGRSRKFDNIWEVLAEMRRK 182
           LKRVRFSH NPLQ LEFFNYTA++R F+HT +S DTMLY+LGRSRKFD IW+VL +++ K
Sbjct: 78  LKRVRFSHGNPLQALEFFNYTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFK 137

Query: 183 DRTLITPRTVQIVLGRIAKVCSLRQTIESFRKFRKLVSQFDTSTSYYNALLRTLCQEKSM 362
           D +LI+ RTV +VLGRIAKVCS+RQT+ESFRKF+K V +FD +   +NALLRTLCQEKSM
Sbjct: 138 DPSLISLRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTC--FNALLRTLCQEKSM 195

Query: 363 SDARNAYHSLKHEFKANLQTFNILLSGWKSSDEAEGFFDEMLALGVKPDVVSYNCLVDVY 542
            DARN YH LK  F+ NLQTFNILLSGWKSS+EAEGFFDEM+ +GVKPDVVSYNCLVDVY
Sbjct: 196 MDARNVYHGLKSMFRPNLQTFNILLSGWKSSEEAEGFFDEMIEMGVKPDVVSYNCLVDVY 255

Query: 543 CKGREIDKAFKVVEKMRGEEITPDVYTYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDT 722
           CK RE+DKAFKVV KMR E+I  DV TYTSIIGGLGLVGQPDKAR++LKEMKEYGCYPD 
Sbjct: 256 CKNREMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDV 315

Query: 723 PAYNAVIRNFCIAKRLGDAYNMMDEMICK 809
            AYNA IRNFCIAKRL +A++++DEM+ K
Sbjct: 316 AAYNATIRNFCIAKRLHEAFDLLDEMVNK 344


>ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score =  421 bits (1081), Expect = e-115
 Identities = 202/269 (75%), Positives = 234/269 (86%)
 Frame = +3

Query: 3   LKRVRFSHSNPLQVLEFFNYTARKREFFHTQYSYDTMLYVLGRSRKFDNIWEVLAEMRRK 182
           LKRVRFSH NPLQ LEFFNYTA++R F+HT +S DTMLY+LGRSRKFD IW+VL +++ K
Sbjct: 78  LKRVRFSHGNPLQALEFFNYTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFK 137

Query: 183 DRTLITPRTVQIVLGRIAKVCSLRQTIESFRKFRKLVSQFDTSTSYYNALLRTLCQEKSM 362
           D +LI+ RTV +VLGRIAKVCS+RQT+ESFRKF+K V +FD +   +NALLRTLCQEKSM
Sbjct: 138 DPSLISLRTVMVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTC--FNALLRTLCQEKSM 195

Query: 363 SDARNAYHSLKHEFKANLQTFNILLSGWKSSDEAEGFFDEMLALGVKPDVVSYNCLVDVY 542
            DARN YH LK  F+ NLQTFNILLSGWKSS+EAEGFFDEM+ +GVKPDVVSYNCLVDVY
Sbjct: 196 MDARNVYHGLKSMFRPNLQTFNILLSGWKSSEEAEGFFDEMIEMGVKPDVVSYNCLVDVY 255

Query: 543 CKGREIDKAFKVVEKMRGEEITPDVYTYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDT 722
           CK RE+DKAFKVV KMR E+I  DV TYTSIIGGLGLVGQPDKAR++LKEMKEYGCYPD 
Sbjct: 256 CKNREMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDV 315

Query: 723 PAYNAVIRNFCIAKRLGDAYNMMDEMICK 809
            AYNA IRNFCIAKRL +A++++DEM+ K
Sbjct: 316 AAYNATIRNFCIAKRLHEAFDLLDEMVNK 344


>ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545711|gb|EEF47215.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 505

 Score =  421 bits (1081), Expect = e-115
 Identities = 203/269 (75%), Positives = 234/269 (86%)
 Frame = +3

Query: 3   LKRVRFSHSNPLQVLEFFNYTARKREFFHTQYSYDTMLYVLGRSRKFDNIWEVLAEMRRK 182
           LKRVRFSH NPLQ LEFF YT  ++ F+HT YS DT+LY+LGRSRKFD+IW+VL +M+RK
Sbjct: 75  LKRVRFSHGNPLQALEFFYYTDNRKGFYHTPYSLDTILYILGRSRKFDHIWDVLIKMKRK 134

Query: 183 DRTLITPRTVQIVLGRIAKVCSLRQTIESFRKFRKLVSQFDTSTSYYNALLRTLCQEKSM 362
           DR LI+PRT+QIVL R+AK+CS+RQT+ESFRKF+K VS  DT+   +NALLRTLCQEKSM
Sbjct: 135 DRFLISPRTMQIVLARVAKLCSVRQTVESFRKFKKFVSVLDTTC--FNALLRTLCQEKSM 192

Query: 363 SDARNAYHSLKHEFKANLQTFNILLSGWKSSDEAEGFFDEMLALGVKPDVVSYNCLVDVY 542
           +DARN YH LK EFK NLQTFNILLSGWK S+EAE FF+EM  LG+KPDVVSYN L+DVY
Sbjct: 193 TDARNVYHRLKKEFKPNLQTFNILLSGWKQSEEAELFFEEMRELGIKPDVVSYNSLIDVY 252

Query: 543 CKGREIDKAFKVVEKMRGEEITPDVYTYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDT 722
           CK RE++KA+KVVEKMR E+I+PDV TYTSIIGGLGLVGQPDKARD+L EMKEYGCYPD 
Sbjct: 253 CKDREMEKAYKVVEKMREEDISPDVITYTSIIGGLGLVGQPDKARDILNEMKEYGCYPDV 312

Query: 723 PAYNAVIRNFCIAKRLGDAYNMMDEMICK 809
            AYNAVIRN+CIAKRLGDA N+MDEM  K
Sbjct: 313 AAYNAVIRNYCIAKRLGDASNLMDEMASK 341


>ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|222852942|gb|EEE90489.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score =  407 bits (1047), Expect = e-111
 Identities = 196/269 (72%), Positives = 233/269 (86%)
 Frame = +3

Query: 3   LKRVRFSHSNPLQVLEFFNYTARKREFFHTQYSYDTMLYVLGRSRKFDNIWEVLAEMRRK 182
           LKRVRFSH NPLQ L+FFN+TA +R F+H+ YS DTMLY+LGRSRKFD+IW+VL +++RK
Sbjct: 79  LKRVRFSHGNPLQALDFFNFTADRRGFYHSSYSLDTMLYILGRSRKFDHIWDVLIDIKRK 138

Query: 183 DRTLITPRTVQIVLGRIAKVCSLRQTIESFRKFRKLVSQFDTSTSYYNALLRTLCQEKSM 362
           DR LITPRT+Q+VLGR+AKVCS+R T+ESF KF++LV  FDTS   +NALLRTLCQEKSM
Sbjct: 139 DRNLITPRTLQVVLGRVAKVCSVRMTVESFWKFKRLVPVFDTSC--FNALLRTLCQEKSM 196

Query: 363 SDARNAYHSLKHEFKANLQTFNILLSGWKSSDEAEGFFDEMLALGVKPDVVSYNCLVDVY 542
           SDARN YH LK  F+ NLQTFNILLSGWKSS+EAE F++EM  LGVKPD+V+YN L+DV+
Sbjct: 197 SDARNVYHHLKKGFRPNLQTFNILLSGWKSSEEAELFYEEMKELGVKPDIVTYNSLIDVF 256

Query: 543 CKGREIDKAFKVVEKMRGEEITPDVYTYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDT 722
           CKGRE++KA+ VV +MR E+I PDV TYTSIIGGLGLVGQPDKARD+LKEMKE+GCYPD 
Sbjct: 257 CKGRELEKAYGVVARMREEDILPDVITYTSIIGGLGLVGQPDKARDMLKEMKEHGCYPDV 316

Query: 723 PAYNAVIRNFCIAKRLGDAYNMMDEMICK 809
            AYNAVIRN+CIAKRL  AY++M EM  K
Sbjct: 317 AAYNAVIRNYCIAKRLDAAYSLMAEMESK 345



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 36/167 (21%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
 Frame = +3

Query: 321 YNALLRTLCQEKSMSDARNAYHSLKHE-FKANLQTFNILLSGWK---SSDEAEGFFDEML 488
           YN+L+   C+ + +  A      ++ E    ++ T+  ++ G       D+A     EM 
Sbjct: 249 YNSLIDVFCKGRELEKAYGVVARMREEDILPDVITYTSIIGGLGLVGQPDKARDMLKEMK 308

Query: 489 ALGVKPDVVSYNCLVDVYCKGREIDKAFKVVEKMRGEEITPDVYTYTSIIGGLGLVGQPD 668
             G  PDV +YN ++  YC  + +D A+ ++ +M  + ++P+  +Y              
Sbjct: 309 EHGCYPDVAAYNAVIRNYCIAKRLDAAYSLMAEMESKGMSPNATSYNLFFRVFSWSNDLR 368

Query: 669 KARDVLKEMKEYGCYPDTPAYNAVIRNFCIAKRLGDAYNMMDEMICK 809
            + D    M + GC P+T +   +I+ F   +++  A  + ++M+ K
Sbjct: 369 NSWDFYGRMMDAGCLPNTQSCMFLIKLFKRHEKVEMALQLWNDMVEK 415