BLASTX nr result

ID: Cimicifuga21_contig00018007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00018007
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273536.1| PREDICTED: uncharacterized protein LOC100241...   196   1e-48
ref|XP_002321142.1| predicted protein [Populus trichocarpa] gi|2...   195   4e-48
ref|NP_001183889.1| uncharacterized protein LOC100502482 [Zea ma...   191   7e-47
gb|AFW62194.1| hypothetical protein ZEAMMB73_528743 [Zea mays]        191   7e-47
ref|XP_003572198.1| PREDICTED: uncharacterized protein LOC100825...   190   9e-47

>ref|XP_002273536.1| PREDICTED: uncharacterized protein LOC100241486 [Vitis vinifera]
           gi|297739195|emb|CBI28846.3| unnamed protein product
           [Vitis vinifera]
          Length = 583

 Score =  196 bits (499), Expect = 1e-48
 Identities = 94/117 (80%), Positives = 104/117 (88%)
 Frame = +3

Query: 54  PILSASWLFQRAMSRKKHVNVSPEFINELLCTNFQCMQRLGDPVLRPFLQDVIQFGPLVK 233
           P LSA+WLFQRAMS K+  +VSP+FI+ELL  NFQ MQRLGDPVLRPFLQDVIQFGPLVK
Sbjct: 443 PNLSAAWLFQRAMSAKQQYDVSPDFISELLYVNFQSMQRLGDPVLRPFLQDVIQFGPLVK 502

Query: 234 TLGLVMLTKPQILPSIFKQVGVPVLVDWFGHFFMLGYYTFLSSFVDPVIRPWVTTFP 404
           TLGLVML+KPQILPSIFKQVGVPVL+DW GHF MLGYYTFLS+F+DP IRP +  FP
Sbjct: 503 TLGLVMLSKPQILPSIFKQVGVPVLLDWSGHFVMLGYYTFLSTFIDPAIRPLINAFP 559


>ref|XP_002321142.1| predicted protein [Populus trichocarpa] gi|222861915|gb|EEE99457.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  195 bits (495), Expect = 4e-48
 Identities = 94/117 (80%), Positives = 103/117 (88%)
 Frame = +3

Query: 54  PILSASWLFQRAMSRKKHVNVSPEFINELLCTNFQCMQRLGDPVLRPFLQDVIQFGPLVK 233
           P LSASWLFQRAMS KK+ NV PEFINELL  NFQ MQ+LGDPVLRPFLQDVIQF  L K
Sbjct: 115 PNLSASWLFQRAMSAKKNSNVPPEFINELLYVNFQSMQKLGDPVLRPFLQDVIQFWALSK 174

Query: 234 TLGLVMLTKPQILPSIFKQVGVPVLVDWFGHFFMLGYYTFLSSFVDPVIRPWVTTFP 404
           TLGLVMLTKPQI+PSIFKQVG+PVL+DW  HFFMLGYYTFLS++ DPVIRP++T FP
Sbjct: 175 TLGLVMLTKPQIIPSIFKQVGIPVLLDWSSHFFMLGYYTFLSTYADPVIRPFLTAFP 231


>ref|NP_001183889.1| uncharacterized protein LOC100502482 [Zea mays]
           gi|238015286|gb|ACR38678.1| unknown [Zea mays]
           gi|413922261|gb|AFW62193.1| hypothetical protein
           ZEAMMB73_528743 [Zea mays]
          Length = 593

 Score =  191 bits (484), Expect = 7e-47
 Identities = 89/117 (76%), Positives = 103/117 (88%)
 Frame = +3

Query: 54  PILSASWLFQRAMSRKKHVNVSPEFINELLCTNFQCMQRLGDPVLRPFLQDVIQFGPLVK 233
           P LSASWLFQRAMS + HVNVSP FINELL  NFQ MQ+LGD VLRPFLQDVIQFGPLVK
Sbjct: 451 PNLSASWLFQRAMSVRPHVNVSPTFINELLFANFQSMQKLGDSVLRPFLQDVIQFGPLVK 510

Query: 234 TLGLVMLTKPQILPSIFKQVGVPVLVDWFGHFFMLGYYTFLSSFVDPVIRPWVTTFP 404
           TLGLVM+T+PQILPSIFKQVG+ V+++W GHF MLGYYTFLS+++DP++R WV + P
Sbjct: 511 TLGLVMITRPQILPSIFKQVGLGVILEWSGHFMMLGYYTFLSTYIDPILRSWVESLP 567


>gb|AFW62194.1| hypothetical protein ZEAMMB73_528743 [Zea mays]
          Length = 516

 Score =  191 bits (484), Expect = 7e-47
 Identities = 89/117 (76%), Positives = 103/117 (88%)
 Frame = +3

Query: 54  PILSASWLFQRAMSRKKHVNVSPEFINELLCTNFQCMQRLGDPVLRPFLQDVIQFGPLVK 233
           P LSASWLFQRAMS + HVNVSP FINELL  NFQ MQ+LGD VLRPFLQDVIQFGPLVK
Sbjct: 374 PNLSASWLFQRAMSVRPHVNVSPTFINELLFANFQSMQKLGDSVLRPFLQDVIQFGPLVK 433

Query: 234 TLGLVMLTKPQILPSIFKQVGVPVLVDWFGHFFMLGYYTFLSSFVDPVIRPWVTTFP 404
           TLGLVM+T+PQILPSIFKQVG+ V+++W GHF MLGYYTFLS+++DP++R WV + P
Sbjct: 434 TLGLVMITRPQILPSIFKQVGLGVILEWSGHFMMLGYYTFLSTYIDPILRSWVESLP 490


>ref|XP_003572198.1| PREDICTED: uncharacterized protein LOC100825935 [Brachypodium
           distachyon]
          Length = 593

 Score =  190 bits (483), Expect = 9e-47
 Identities = 90/117 (76%), Positives = 102/117 (87%)
 Frame = +3

Query: 54  PILSASWLFQRAMSRKKHVNVSPEFINELLCTNFQCMQRLGDPVLRPFLQDVIQFGPLVK 233
           P LSASWLFQRAMS +   NVSP FINELL  NFQ MQ+LGD VLRPFLQDVIQFGPLVK
Sbjct: 451 PNLSASWLFQRAMSTRPQTNVSPTFINELLYANFQSMQKLGDSVLRPFLQDVIQFGPLVK 510

Query: 234 TLGLVMLTKPQILPSIFKQVGVPVLVDWFGHFFMLGYYTFLSSFVDPVIRPWVTTFP 404
           TLGLVML++PQILPSIFKQVG+ V+++W GHF MLGYYTFLS+F+DPV+RPWV + P
Sbjct: 511 TLGLVMLSRPQILPSIFKQVGLGVILNWSGHFVMLGYYTFLSNFIDPVVRPWVESLP 567


Top