BLASTX nr result
ID: Cimicifuga21_contig00018003
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00018003
(532 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002879390.1| calcium-binding EF hand family protein [Arab... 94 8e-19
emb|CAN76555.1| hypothetical protein VITISV_011396 [Vitis vinifera] 92 6e-17
ref|XP_002510481.1| tetratricopeptide repeat protein, tpr, putat... 91 8e-17
ref|XP_002280691.2| PREDICTED: uncharacterized TPR repeat-contai... 91 1e-16
emb|CBI19798.3| unnamed protein product [Vitis vinifera] 91 1e-16
>ref|XP_002879390.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
lyrata] gi|297325229|gb|EFH55649.1| calcium-binding EF
hand family protein [Arabidopsis lyrata subsp. lyrata]
Length = 800
Score = 93.6 bits (231), Expect(2) = 8e-19
Identities = 77/236 (32%), Positives = 106/236 (44%), Gaps = 79/236 (33%)
Frame = -1
Query: 532 MDMERCQRASE----------NHWRAQLNKALALLGANEGVETRKALKEAFKTTNMVELH 383
MD+ R QRASE NHWRAQLNKA++LLGA E E ++ALKEA K TN VELH
Sbjct: 420 MDLGRFQRASEMYTRVLAVWPNHWRAQLNKAVSLLGAGETEEAKRALKEALKMTNRVELH 479
Query: 382 DCMMQLLI*STSRRSMPRGT---------MVAILKFRRISEET----------------- 281
D + L ++ + +G +V KF+ + E+T
Sbjct: 480 DAVSHLK--QLQKKKVKKGNSANEEGPFIVVEPSKFKTVGEKTTLRPDLAIALQIRAFQR 537
Query: 280 -----------LSREKLDNTLGI---------RAFQRPSSPD-------------WDSAM 200
L RE DN + + ++ +RP+ + + A+
Sbjct: 538 VTRLWKCDVEALRREMRDNNVPVSYSGNGVPTKSIRRPNLEEILRRLLNVLKPETFQGAI 597
Query: 199 SML*RRNL----------VDLGIFYTVLAPFCCGLSDKRKRVVFDALLRRQVDEES 62
+ + L VDLG+FY V+AP C G DKRKRV FDALL + +E S
Sbjct: 598 KAINEKILSVLDDSGSGRVDLGMFYAVIAPLCGGHPDKRKRVAFDALLWKPENEGS 653
Score = 25.0 bits (53), Expect(2) = 8e-19
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 62 LMLLRVVYHPSQAFDGMLEV 3
+ LLR +Y PSQ MLEV
Sbjct: 665 IKLLRAIYIPSQGMSEMLEV 684
>emb|CAN76555.1| hypothetical protein VITISV_011396 [Vitis vinifera]
Length = 799
Score = 91.7 bits (226), Expect = 6e-17
Identities = 58/119 (48%), Positives = 70/119 (58%), Gaps = 18/119 (15%)
Frame = -1
Query: 532 MDMERCQRASE----------NHWRAQLNKALALLGANEGVETRKALKEAFKTTNMVELH 383
MDM R QRASE NHWRAQLNKA++LLGA E E +KALKEA K TN VELH
Sbjct: 417 MDMGRFQRASEMYTRVLAVCPNHWRAQLNKAVSLLGAGEAEEAKKALKEALKMTNRVELH 476
Query: 382 DCMMQLLI*STSRRSMPRG--------TMVAILKFRRISEETLSREKLDNTLGIRAFQR 230
D + L ++ P G ++V KF+ + E+T R +L NTL IRAFQR
Sbjct: 477 DAISHLKQ-LQKKKVKPNGSANGEGAFSIVEPSKFKXVGEKTALRPELANTLEIRAFQR 534
Score = 52.0 bits (123), Expect(2) = 7e-06
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = -1
Query: 175 VDLGIFYTVLAPFCCGLSDKRKRVVFDALLRRQVDEES 62
VDLG+F++VLAP C G DKRKRV +DALL R V+E S
Sbjct: 613 VDLGMFFSVLAPICGGSPDKRKRVAYDALLWRPVNEGS 650
Score = 22.7 bits (47), Expect(2) = 7e-06
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 62 LMLLRVVYHPSQAFDGMLEV 3
+ LLR +Y PS MLEV
Sbjct: 662 IKLLRAIYIPSHGVSEMLEV 681
>ref|XP_002510481.1| tetratricopeptide repeat protein, tpr, putative [Ricinus communis]
gi|223551182|gb|EEF52668.1| tetratricopeptide repeat
protein, tpr, putative [Ricinus communis]
Length = 804
Score = 91.3 bits (225), Expect = 8e-17
Identities = 56/119 (47%), Positives = 69/119 (57%), Gaps = 18/119 (15%)
Frame = -1
Query: 532 MDMERCQRASE----------NHWRAQLNKALALLGANEGVETRKALKEAFKTTNMVELH 383
MD+ R QRASE NHWRAQLNKA++LLGA E ET+KALKEA K TN VELH
Sbjct: 426 MDLGRFQRASEMYSRVLAVWPNHWRAQLNKAVSLLGAGETEETKKALKEALKMTNRVELH 485
Query: 382 DCMMQLLI*STSRRSMPRGT--------MVAILKFRRISEETLSREKLDNTLGIRAFQR 230
D + L + G +V + KF+ SE+T +R+ L N L +RAFQR
Sbjct: 486 DAISHLKQLQKKKVKGSNGVANGEGAFIVVELSKFKTASEKTTARQDLANALQVRAFQR 544
>ref|XP_002280691.2| PREDICTED: uncharacterized TPR repeat-containing protein
At1g05150-like [Vitis vinifera]
Length = 799
Score = 90.9 bits (224), Expect = 1e-16
Identities = 58/119 (48%), Positives = 70/119 (58%), Gaps = 18/119 (15%)
Frame = -1
Query: 532 MDMERCQRASE----------NHWRAQLNKALALLGANEGVETRKALKEAFKTTNMVELH 383
MDM R QRASE NHWRAQLNKA++LLGA E E +KALKEA K TN VELH
Sbjct: 417 MDMGRFQRASEMYTRVLAVCPNHWRAQLNKAVSLLGAGEAEEAKKALKEALKMTNRVELH 476
Query: 382 DCMMQLLI*STSRRSMPRG--------TMVAILKFRRISEETLSREKLDNTLGIRAFQR 230
D + L ++ P G ++V KF+ + E+T R +L NTL IRAFQR
Sbjct: 477 DAISHLKQ-LQKKKVKPNGSANGEGAFSIVEPSKFKIVGEKTALRPELANTLEIRAFQR 534
Score = 52.0 bits (123), Expect(2) = 7e-06
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = -1
Query: 175 VDLGIFYTVLAPFCCGLSDKRKRVVFDALLRRQVDEES 62
VDLG+F++VLAP C G DKRKRV +DALL R V+E S
Sbjct: 613 VDLGMFFSVLAPICGGSPDKRKRVAYDALLWRPVNEGS 650
Score = 22.7 bits (47), Expect(2) = 7e-06
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 62 LMLLRVVYHPSQAFDGMLEV 3
+ LLR +Y PS MLEV
Sbjct: 662 IKLLRAIYIPSHGVSEMLEV 681
>emb|CBI19798.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 90.9 bits (224), Expect = 1e-16
Identities = 58/119 (48%), Positives = 70/119 (58%), Gaps = 18/119 (15%)
Frame = -1
Query: 532 MDMERCQRASE----------NHWRAQLNKALALLGANEGVETRKALKEAFKTTNMVELH 383
MDM R QRASE NHWRAQLNKA++LLGA E E +KALKEA K TN VELH
Sbjct: 364 MDMGRFQRASEMYTRVLAVCPNHWRAQLNKAVSLLGAGEAEEAKKALKEALKMTNRVELH 423
Query: 382 DCMMQLLI*STSRRSMPRG--------TMVAILKFRRISEETLSREKLDNTLGIRAFQR 230
D + L ++ P G ++V KF+ + E+T R +L NTL IRAFQR
Sbjct: 424 DAISHLKQ-LQKKKVKPNGSANGEGAFSIVEPSKFKIVGEKTALRPELANTLEIRAFQR 481
Score = 52.0 bits (123), Expect(2) = 7e-06
Identities = 25/38 (65%), Positives = 30/38 (78%)
Frame = -1
Query: 175 VDLGIFYTVLAPFCCGLSDKRKRVVFDALLRRQVDEES 62
VDLG+F++VLAP C G DKRKRV +DALL R V+E S
Sbjct: 560 VDLGMFFSVLAPICGGSPDKRKRVAYDALLWRPVNEGS 597
Score = 22.7 bits (47), Expect(2) = 7e-06
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 62 LMLLRVVYHPSQAFDGMLEV 3
+ LLR +Y PS MLEV
Sbjct: 609 IKLLRAIYIPSHGVSEMLEV 628