BLASTX nr result

ID: Cimicifuga21_contig00017976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017976
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35366.3| unnamed protein product [Vitis vinifera]              287   2e-75
ref|XP_004172034.1| PREDICTED: DNA repair protein rad5-like, par...   283   3e-74
ref|XP_004150194.1| PREDICTED: uncharacterized ATP-dependent hel...   283   3e-74
ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent hel...   283   3e-74
ref|XP_002310362.1| chromatin remodeling complex subunit [Populu...   278   1e-72

>emb|CBI35366.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  287 bits (734), Expect = 2e-75
 Identities = 145/172 (84%), Positives = 157/172 (91%), Gaps = 1/172 (0%)
 Frame = -1

Query: 741  LEILEKYSNS-PQEERQVKAIVFSQWTGMLDLVETSLNHSCIQYRRFDGTMSLASRDRAV 565
            LEIL+ +S S P+ E  +KAIVFSQWT MLDLVE S+NHSCIQYRR DGTMSLASRDRAV
Sbjct: 736  LEILQSHSYSNPETEGPIKAIVFSQWTSMLDLVEMSMNHSCIQYRRLDGTMSLASRDRAV 795

Query: 564  KDFNNDPEVTVMLMSLKAGNLGLNLVAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPVT 385
            KDFN DPEVTVMLMSLKAGNLGLN+VAA  VILLDLWWNPTTEDQAVDRAHRIGQTRPVT
Sbjct: 796  KDFNTDPEVTVMLMSLKAGNLGLNMVAASLVILLDLWWNPTTEDQAVDRAHRIGQTRPVT 855

Query: 384  VSRLTVTDTVEDRILSLQEEKRKMVASAFGEDHKGGTATRLTVEDLRYLFMV 229
            VSR+T+ DTVEDRIL+LQE+KRKMVASAFGED  GG+ATRLTVEDL+YLFMV
Sbjct: 856  VSRITIKDTVEDRILALQEDKRKMVASAFGEDQTGGSATRLTVEDLKYLFMV 907


>ref|XP_004172034.1| PREDICTED: DNA repair protein rad5-like, partial [Cucumis sativus]
          Length = 379

 Score =  283 bits (724), Expect = 3e-74
 Identities = 140/164 (85%), Positives = 149/164 (90%)
 Frame = -1

Query: 720 SNSPQEERQVKAIVFSQWTGMLDLVETSLNHSCIQYRRFDGTMSLASRDRAVKDFNNDPE 541
           S  P  E  VK IVFSQWT MLDLVE SLN +CIQYRR DGTMSL SRDRAVKDFN+DPE
Sbjct: 216 SPCPPTEEPVKTIVFSQWTSMLDLVELSLNEACIQYRRLDGTMSLVSRDRAVKDFNSDPE 275

Query: 540 VTVMLMSLKAGNLGLNLVAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRLTVTD 361
           ++VMLMSLKAGNLGLN+VAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSR+TV D
Sbjct: 276 ISVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRITVKD 335

Query: 360 TVEDRILSLQEEKRKMVASAFGEDHKGGTATRLTVEDLRYLFMV 229
           TVEDRIL+LQEEKRKMVASAFGED  GG+A+RLTVEDLRYLFMV
Sbjct: 336 TVEDRILALQEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV 379


>ref|XP_004150194.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            [Cucumis sativus]
          Length = 1015

 Score =  283 bits (724), Expect = 3e-74
 Identities = 140/164 (85%), Positives = 149/164 (90%)
 Frame = -1

Query: 720  SNSPQEERQVKAIVFSQWTGMLDLVETSLNHSCIQYRRFDGTMSLASRDRAVKDFNNDPE 541
            S  P  E  VK IVFSQWT MLDLVE SLN +CIQYRR DGTMSL SRDRAVKDFN+DPE
Sbjct: 852  SPCPPTEEPVKTIVFSQWTSMLDLVELSLNEACIQYRRLDGTMSLVSRDRAVKDFNSDPE 911

Query: 540  VTVMLMSLKAGNLGLNLVAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRLTVTD 361
            ++VMLMSLKAGNLGLN+VAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSR+TV D
Sbjct: 912  ISVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRITVKD 971

Query: 360  TVEDRILSLQEEKRKMVASAFGEDHKGGTATRLTVEDLRYLFMV 229
            TVEDRIL+LQEEKRKMVASAFGED  GG+A+RLTVEDLRYLFMV
Sbjct: 972  TVEDRILALQEEKRKMVASAFGEDQSGGSASRLTVEDLRYLFMV 1015


>ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
            [Vitis vinifera]
          Length = 1013

 Score =  283 bits (724), Expect = 3e-74
 Identities = 142/165 (86%), Positives = 152/165 (92%)
 Frame = -1

Query: 723  YSNSPQEERQVKAIVFSQWTGMLDLVETSLNHSCIQYRRFDGTMSLASRDRAVKDFNNDP 544
            YSN P+ E  +KAIVFSQWT MLDLVE S+NHSCIQYRR DGTMSLASRDRAVKDFN DP
Sbjct: 850  YSN-PETEGPIKAIVFSQWTSMLDLVEMSMNHSCIQYRRLDGTMSLASRDRAVKDFNTDP 908

Query: 543  EVTVMLMSLKAGNLGLNLVAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRLTVT 364
            EVTVMLMSLKAGNLGLN+VAA  VILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSR+T+ 
Sbjct: 909  EVTVMLMSLKAGNLGLNMVAASLVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRITIK 968

Query: 363  DTVEDRILSLQEEKRKMVASAFGEDHKGGTATRLTVEDLRYLFMV 229
            DTVEDRIL+LQE+KRKMVASAFGED  GG+ATRLTVEDL+YLFMV
Sbjct: 969  DTVEDRILALQEDKRKMVASAFGEDQTGGSATRLTVEDLKYLFMV 1013


>ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222853265|gb|EEE90812.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 923

 Score =  278 bits (710), Expect = 1e-72
 Identities = 135/158 (85%), Positives = 147/158 (93%)
 Frame = -1

Query: 702  ERQVKAIVFSQWTGMLDLVETSLNHSCIQYRRFDGTMSLASRDRAVKDFNNDPEVTVMLM 523
            E  +KAIVFSQWT MLDLVE SLN  CIQYRR DGTM+L+SRD+AVKDFN DPEVTVMLM
Sbjct: 766  EGPIKAIVFSQWTSMLDLVEFSLNQHCIQYRRLDGTMTLSSRDKAVKDFNTDPEVTVMLM 825

Query: 522  SLKAGNLGLNLVAACHVILLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRLTVTDTVEDRI 343
            SLKAGNLGLN+VAACHVILLDLWWNPTTEDQA+DRAHRIGQTRPVTV+RLT+ DTVEDRI
Sbjct: 826  SLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRLTIKDTVEDRI 885

Query: 342  LSLQEEKRKMVASAFGEDHKGGTATRLTVEDLRYLFMV 229
            L+LQ+EKRKMVASAFGED  GG+ATRLTVEDL+YLFMV
Sbjct: 886  LALQDEKRKMVASAFGEDQSGGSATRLTVEDLKYLFMV 923


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