BLASTX nr result

ID: Cimicifuga21_contig00017969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017969
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315858.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002265946.1| PREDICTED: leucine-rich repeat receptor prot...    61   8e-08
ref|XP_002263766.1| PREDICTED: receptor-like protein 12-like [Vi...    60   2e-07
ref|XP_003633782.1| PREDICTED: LRR receptor-like serine/threonin...    60   2e-07
ref|XP_002318450.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002315858.1| predicted protein [Populus trichocarpa] gi|222864898|gb|EEF02029.1|
           predicted protein [Populus trichocarpa]
          Length = 995

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
 Frame = +3

Query: 3   LDLHNNSISGPIPNSIGDMM-PSLKVXXXXXXXXXXXXPTSICKMKALILLDISKNHLSG 179
           LD+ NN + G IP  IG+MM P L +            P S+CKM  L  LD+S+N  SG
Sbjct: 552 LDVSNNFLRGQIPQDIGNMMMPRLTLFHLSSNSLNGNIPVSLCKMGGLRFLDLSENQFSG 611

Query: 180 DLPQCWTDLQNL 215
            +P CW+ LQ+L
Sbjct: 612 GIPNCWSKLQHL 623


>ref|XP_002265946.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS [Vitis
           vinifera]
          Length = 969

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/71 (46%), Positives = 46/71 (64%)
 Frame = +3

Query: 3   LDLHNNSISGPIPNSIGDMMPSLKVXXXXXXXXXXXXPTSICKMKALILLDISKNHLSGD 182
           L L NNS SGPIP +IGD+  SL+V            P+S+ K+K L ++D+S N LSG 
Sbjct: 537 LFLGNNSFSGPIPLNIGDLS-SLEVLDVSSNLLNGSIPSSMSKLKDLRVIDLSNNQLSGK 595

Query: 183 LPQCWTDLQNL 215
           +P+ W+DLQ+L
Sbjct: 596 IPKNWSDLQHL 606



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 29/71 (40%), Positives = 39/71 (54%)
 Frame = +3

Query: 3   LDLHNNSISGPIPNSIGDMMPSLKVXXXXXXXXXXXXPTSICKMKALILLDISKNHLSGD 182
           LDL NN  SG IP  IG+ MPSL+             P  +C +  L +LD++ N+LSG 
Sbjct: 657 LDLGNNRFSGEIPKWIGERMPSLEQMRLRGNMLTGDIPEQLCWLSHLHILDLAVNNLSGF 716

Query: 183 LPQCWTDLQNL 215
           +PQC  +L  L
Sbjct: 717 IPQCLGNLTAL 727


>ref|XP_002263766.1| PREDICTED: receptor-like protein 12-like [Vitis vinifera]
          Length = 957

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/71 (46%), Positives = 43/71 (60%)
 Frame = +3

Query: 3   LDLHNNSISGPIPNSIGDMMPSLKVXXXXXXXXXXXXPTSICKMKALILLDISKNHLSGD 182
           L L NNS SGPIP +IG+   SL+V            P+SI K+K L ++D+S NHLSG 
Sbjct: 525 LYLGNNSFSGPIPLNIGESS-SLEVLDVSSNLLNGSIPSSISKLKDLEVIDLSNNHLSGK 583

Query: 183 LPQCWTDLQNL 215
           +P+ W DL  L
Sbjct: 584 IPKNWNDLHRL 594



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 29/71 (40%), Positives = 39/71 (54%)
 Frame = +3

Query: 3   LDLHNNSISGPIPNSIGDMMPSLKVXXXXXXXXXXXXPTSICKMKALILLDISKNHLSGD 182
           LDL NN  SG IP  IG+ MPSL+             P  +C +  L +LD++ N+LSG 
Sbjct: 645 LDLGNNRFSGEIPKWIGERMPSLEQLRLRGNMLTGDIPEQLCWLSDLHILDLAVNNLSGS 704

Query: 183 LPQCWTDLQNL 215
           +PQC  +L  L
Sbjct: 705 IPQCLGNLTAL 715


>ref|XP_003633782.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           FLS2-like [Vitis vinifera]
          Length = 958

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/68 (42%), Positives = 41/68 (60%)
 Frame = +3

Query: 3   LDLHNNSISGPIPNSIGDMMPSLKVXXXXXXXXXXXXPTSICKMKALILLDISKNHLSGD 182
           LDL +N  SG IP+ IG+ MPSL +            P+ IC + AL +LD+S NH+SG 
Sbjct: 655 LDLGDNKFSGNIPSWIGESMPSLLILALQSNFFSGNIPSEICALSALHILDLSHNHVSGF 714

Query: 183 LPQCWTDL 206
           +P C+ +L
Sbjct: 715 IPPCFGNL 722


>ref|XP_002318450.1| predicted protein [Populus trichocarpa] gi|222859123|gb|EEE96670.1|
           predicted protein [Populus trichocarpa]
          Length = 753

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/71 (42%), Positives = 42/71 (59%)
 Frame = +3

Query: 3   LDLHNNSISGPIPNSIGDMMPSLKVXXXXXXXXXXXXPTSICKMKALILLDISKNHLSGD 182
           LDL NNS+ GPIP+SI      + +            P+SICK+K+L +LD+S N+LSG 
Sbjct: 418 LDLSNNSLHGPIPSSIFKQENLVVLILASNNKLTWEVPSSICKLKSLRVLDLSNNNLSGS 477

Query: 183 LPQCWTDLQNL 215
            PQC  +  N+
Sbjct: 478 APQCLGNFSNM 488


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