BLASTX nr result

ID: Cimicifuga21_contig00017962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017962
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_197014.1| putative auxin efflux carrier component 5 [Arab...    49   2e-08
ref|XP_003577875.1| PREDICTED: probable auxin efflux carrier com...    49   1e-07
ref|NP_001234211.1| auxin efflux facilitator SlPIN8 [Solanum lyc...    49   2e-07
ref|XP_003610026.1| Auxin efflux carrier component [Medicago tru...    52   3e-07
ref|NP_001234204.1| auxin efflux facilitator SlPIN7 [Solanum lyc...    50   5e-07

>ref|NP_197014.1| putative auxin efflux carrier component 5 [Arabidopsis thaliana]
           gi|42558885|sp|Q9LFP6.1|PIN5_ARATH RecName:
           Full=Putative auxin efflux carrier component 5;
           Short=AtPIN5 gi|9755677|emb|CAC01829.1| auxin transport
           protein-like [Arabidopsis thaliana]
           gi|332004734|gb|AED92117.1| putative auxin efflux
           carrier component 5 [Arabidopsis thaliana]
          Length = 367

 Score = 48.9 bits (115), Expect(2) = 2e-08
 Identities = 20/23 (86%), Positives = 22/23 (95%)
 Frame = -1

Query: 289 PQGIVPFVFAKEYNLHPNILSTG 221
           PQG+VPFVFAKEYNLHP I+STG
Sbjct: 324 PQGVVPFVFAKEYNLHPEIISTG 346



 Score = 34.3 bits (77), Expect(2) = 2e-08
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = -2

Query: 129 VIFGMVITIPTTLAYYF 79
           VIFGM+I +PTTLAYYF
Sbjct: 347 VIFGMLIALPTTLAYYF 363


>ref|XP_003577875.1| PREDICTED: probable auxin efflux carrier component 1b-like
           [Brachypodium distachyon]
          Length = 562

 Score = 48.9 bits (115), Expect(2) = 1e-07
 Identities = 21/22 (95%), Positives = 22/22 (100%)
 Frame = -1

Query: 289 PQGIVPFVFAKEYNLHPNILST 224
           PQGIVPFVFAKEYN+HPNILST
Sbjct: 519 PQGIVPFVFAKEYNVHPNILST 540



 Score = 32.0 bits (71), Expect(2) = 1e-07
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -2

Query: 129 VIFGMVITIPTTLAYYF 79
           VIFGM+I +P TLAYYF
Sbjct: 542 VIFGMLIALPITLAYYF 558


>ref|NP_001234211.1| auxin efflux facilitator SlPIN8 [Solanum lycopersicum]
           gi|312983238|gb|ADR30415.1| auxin efflux facilitator
           SlPIN8 [Solanum lycopersicum]
          Length = 357

 Score = 49.3 bits (116), Expect(2) = 2e-07
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -1

Query: 289 PQGIVPFVFAKEYNLHPNILSTG 221
           PQGIVPFVFAKEYN+HP ILSTG
Sbjct: 314 PQGIVPFVFAKEYNIHPTILSTG 336



 Score = 30.8 bits (68), Expect(2) = 2e-07
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -2

Query: 129 VIFGMVITIPTTLAYYF 79
           VIFGM+I IP  LAYYF
Sbjct: 337 VIFGMLIAIPIALAYYF 353


>ref|XP_003610026.1| Auxin efflux carrier component [Medicago truncatula]
           gi|28204657|gb|AAM55298.2| auxin efflux carrier protein
           [Medicago truncatula] gi|355511081|gb|AES92223.1| Auxin
           efflux carrier component [Medicago truncatula]
          Length = 625

 Score = 52.4 bits (124), Expect(2) = 3e-07
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = -1

Query: 289 PQGIVPFVFAKEYNLHPNILSTG 221
           PQGIVPFVFAKEYNLHPNILSTG
Sbjct: 582 PQGIVPFVFAKEYNLHPNILSTG 604



 Score = 26.9 bits (58), Expect(2) = 3e-07
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = -2

Query: 129 VIFGMVITIPTTLAYY 82
           VIFGM+I +P T+ YY
Sbjct: 605 VIFGMLIALPITILYY 620


>ref|NP_001234204.1| auxin efflux facilitator SlPIN7 [Solanum lycopersicum]
           gi|312983224|gb|ADR30408.1| auxin efflux facilitator
           SlPIN7 [Solanum lycopersicum]
          Length = 586

 Score = 50.4 bits (119), Expect(2) = 5e-07
 Identities = 22/23 (95%), Positives = 23/23 (100%)
 Frame = -1

Query: 289 PQGIVPFVFAKEYNLHPNILSTG 221
           PQGIVPFVFAKEYNLHP+ILSTG
Sbjct: 543 PQGIVPFVFAKEYNLHPDILSTG 565



 Score = 28.1 bits (61), Expect(2) = 5e-07
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = -2

Query: 129 VIFGMVITIPTTLAYY 82
           VIFGM+I +P TL YY
Sbjct: 566 VIFGMLIALPITLVYY 581


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