BLASTX nr result

ID: Cimicifuga21_contig00017929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017929
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB43255.1| blight resistance protein [Capsicum annuum]             60   5e-12
ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trich...    60   8e-12
ref|XP_003615744.1| Cc-nbs-lrr resistance protein [Medicago trun...    54   1e-11
ref|XP_003613325.1| Resistance protein [Medicago truncatula] gi|...    55   3e-11
ref|XP_003517872.1| PREDICTED: disease resistance protein RGA2-l...    53   4e-11

>gb|ADB43255.1| blight resistance protein [Capsicum annuum]
          Length = 994

 Score = 59.7 bits (143), Expect(2) = 5e-12
 Identities = 27/40 (67%), Positives = 30/40 (75%)
 Frame = +1

Query: 103 LKFLTQNDCWLLFRQRAFGIGNEETPNLATIGREIVKKCG 222
           L  L+Q DCWLLF+QRAFG   E  PNL  IG+EIVKKCG
Sbjct: 308 LSNLSQEDCWLLFKQRAFGHQMETNPNLTAIGKEIVKKCG 347



 Score = 35.8 bits (81), Expect(2) = 5e-12
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +2

Query: 2   RCLLECGAKGSSIIVTTRLQTVASITGTCLL 94
           + +L  GA GSSI++TTRL+ + SI GT  L
Sbjct: 275 KAVLRVGASGSSILITTRLEKIGSIMGTLQL 305


>ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222845009|gb|EEE82556.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1093

 Score = 59.7 bits (143), Expect(2) = 8e-12
 Identities = 28/45 (62%), Positives = 35/45 (77%), Gaps = 1/45 (2%)
 Frame = +1

Query: 91  PPCSLKFLTQNDCWLLFRQRAFGIGNEET-PNLATIGREIVKKCG 222
           PP  L+ L++NDCWLLF+QRAF  GNE+   NL  IG+EI+KKCG
Sbjct: 320 PPFRLEGLSENDCWLLFKQRAFIDGNEDAHQNLVPIGKEILKKCG 364



 Score = 35.0 bits (79), Expect(2) = 8e-12
 Identities = 18/28 (64%), Positives = 19/28 (67%)
 Frame = +2

Query: 2   RCLLECGAKGSSIIVTTRLQTVASITGT 85
           R     GA GS IIVTTR + VASITGT
Sbjct: 291 RLPFRAGASGSKIIVTTRSEKVASITGT 318


>ref|XP_003615744.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
           gi|355517079|gb|AES98702.1| Cc-nbs-lrr resistance
           protein [Medicago truncatula]
          Length = 1090

 Score = 54.3 bits (129), Expect(2) = 1e-11
 Identities = 24/40 (60%), Positives = 28/40 (70%)
 Frame = +1

Query: 103 LKFLTQNDCWLLFRQRAFGIGNEETPNLATIGREIVKKCG 222
           L  L++N+CWLLFRQ AFG   EE   L  IG+ IVKKCG
Sbjct: 319 LSGLSENECWLLFRQYAFGCAGEEREELVAIGKAIVKKCG 358



 Score = 39.7 bits (91), Expect(2) = 1e-11
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +2

Query: 11  LECGAKGSSIIVTTRLQTVASITGTCL 91
           L CG+KGSSI+V+TR + VA I GTCL
Sbjct: 289 LSCGSKGSSILVSTRDKDVAEIMGTCL 315


>ref|XP_003613325.1| Resistance protein [Medicago truncatula]
           gi|355514660|gb|AES96283.1| Resistance protein [Medicago
           truncatula]
          Length = 499

 Score = 55.5 bits (132), Expect(2) = 3e-11
 Identities = 24/44 (54%), Positives = 29/44 (65%)
 Frame = +1

Query: 91  PPCSLKFLTQNDCWLLFRQRAFGIGNEETPNLATIGREIVKKCG 222
           P   L  L+  DCW L +QRAFG   +E P+L  IG+EIVKKCG
Sbjct: 320 PSHDLSMLSDTDCWELIKQRAFGPNEDERPDLVVIGKEIVKKCG 363



 Score = 37.4 bits (85), Expect(2) = 3e-11
 Identities = 16/28 (57%), Positives = 22/28 (78%)
 Frame = +2

Query: 2   RCLLECGAKGSSIIVTTRLQTVASITGT 85
           + +L CG KG+S++VTTRL  VA+I GT
Sbjct: 291 KSVLACGGKGASVLVTTRLPKVAAIMGT 318


>ref|XP_003517872.1| PREDICTED: disease resistance protein RGA2-like [Glycine max]
          Length = 899

 Score = 53.1 bits (126), Expect(2) = 4e-11
 Identities = 24/43 (55%), Positives = 27/43 (62%)
 Frame = +1

Query: 91  PPCSLKFLTQNDCWLLFRQRAFGIGNEETPNLATIGREIVKKC 219
           PP  L  L+ NDCW LF+ RAFG    E   L  IG+EIVKKC
Sbjct: 294 PPHELSMLSDNDCWELFKHRAFGPNEVEQVELVIIGKEIVKKC 336



 Score = 39.3 bits (90), Expect(2) = 4e-11
 Identities = 18/28 (64%), Positives = 23/28 (82%)
 Frame = +2

Query: 2   RCLLECGAKGSSIIVTTRLQTVASITGT 85
           + +L CGAKG+SI+VTTRL  VA+I GT
Sbjct: 265 KSVLACGAKGASILVTTRLPKVAAIMGT 292


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