BLASTX nr result

ID: Cimicifuga21_contig00017919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017919
         (1211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633251.1| PREDICTED: GTP-binding protein TypA/BipA hom...   570   e-160
ref|XP_002278771.1| PREDICTED: GTP-binding protein TypA/BipA hom...   570   e-160
ref|XP_004165675.1| PREDICTED: GTP-binding protein TypA/BipA hom...   556   e-156
ref|XP_002525152.1| GTP-binding protein typa/bipa, putative [Ric...   553   e-155
ref|XP_002330669.1| predicted protein [Populus trichocarpa] gi|2...   553   e-155

>ref|XP_003633251.1| PREDICTED: GTP-binding protein TypA/BipA homolog isoform 2 [Vitis
            vinifera]
          Length = 684

 Score =  570 bits (1469), Expect = e-160
 Identities = 292/337 (86%), Positives = 305/337 (90%)
 Frame = -2

Query: 1210 AGDIISMAGLASPSIGHTVANVEVMTALPTVELDPPTISMTFGVNDSPLAGRDGTHLTGG 1031
            AGDIISMAGL SPSIGHTVANVEVMTALPTVELDPPTISMTF VNDSPLAGRDGTHLTGG
Sbjct: 348  AGDIISMAGLTSPSIGHTVANVEVMTALPTVELDPPTISMTFSVNDSPLAGRDGTHLTGG 407

Query: 1030 KIGDRLIAEAETNLAINVLPALSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYK 851
            KIGDRL+AEAETNLAINVLP LSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYK
Sbjct: 408  KIGDRLMAEAETNLAINVLPGLSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYK 467

Query: 850  TEKGXXXXXXXXXXXXXXXXXVGLVMEALSHRRAEVLDMGPVPGNFGRTRMSLTCPSRGL 671
            TEKG                 VGLVMEALSHRRAEV+DMGPV G+ GRTR+S+TCPSRGL
Sbjct: 468  TEKGVKFEPLEEVTIEVNEEHVGLVMEALSHRRAEVVDMGPVAGSEGRTRISMTCPSRGL 527

Query: 670  VGYRSVFSSDTRGTGFMHRAFLKYAKHRGPLGNVRKGVLVSVGYGPITGHALTSLEARGT 491
            VGYRSVFSSDTRGTGFMHRAFL YAK RGPLGNVRKGVLVS+G+G IT +AL SLE RGT
Sbjct: 528  VGYRSVFSSDTRGTGFMHRAFLTYAKFRGPLGNVRKGVLVSMGHGTITAYALVSLEPRGT 587

Query: 490  LFVTPGMETYDGMIVGEHSRDTDLDVNPVRMKELTNIRSVNKDENVKLTPPRLMTLEEAI 311
            LFVTPGMETYDGMIVGEHSRDTDLD+NPVR KELTNIR+ +KDENVKLTPPRLMTLEEAI
Sbjct: 588  LFVTPGMETYDGMIVGEHSRDTDLDINPVRAKELTNIRAASKDENVKLTPPRLMTLEEAI 647

Query: 310  GYVASDELIEVTPKAIRLRKKFLDASKRKNSRNKPKD 200
            GYVASDELIEVTPKAIRLRKK+LDA+KRK  RNKPKD
Sbjct: 648  GYVASDELIEVTPKAIRLRKKYLDANKRKMMRNKPKD 684


>ref|XP_002278771.1| PREDICTED: GTP-binding protein TypA/BipA homolog isoform 1 [Vitis
            vinifera] gi|302143376|emb|CBI21937.3| unnamed protein
            product [Vitis vinifera]
          Length = 672

 Score =  570 bits (1469), Expect = e-160
 Identities = 292/337 (86%), Positives = 305/337 (90%)
 Frame = -2

Query: 1210 AGDIISMAGLASPSIGHTVANVEVMTALPTVELDPPTISMTFGVNDSPLAGRDGTHLTGG 1031
            AGDIISMAGL SPSIGHTVANVEVMTALPTVELDPPTISMTF VNDSPLAGRDGTHLTGG
Sbjct: 336  AGDIISMAGLTSPSIGHTVANVEVMTALPTVELDPPTISMTFSVNDSPLAGRDGTHLTGG 395

Query: 1030 KIGDRLIAEAETNLAINVLPALSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYK 851
            KIGDRL+AEAETNLAINVLP LSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYK
Sbjct: 396  KIGDRLMAEAETNLAINVLPGLSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYK 455

Query: 850  TEKGXXXXXXXXXXXXXXXXXVGLVMEALSHRRAEVLDMGPVPGNFGRTRMSLTCPSRGL 671
            TEKG                 VGLVMEALSHRRAEV+DMGPV G+ GRTR+S+TCPSRGL
Sbjct: 456  TEKGVKFEPLEEVTIEVNEEHVGLVMEALSHRRAEVVDMGPVAGSEGRTRISMTCPSRGL 515

Query: 670  VGYRSVFSSDTRGTGFMHRAFLKYAKHRGPLGNVRKGVLVSVGYGPITGHALTSLEARGT 491
            VGYRSVFSSDTRGTGFMHRAFL YAK RGPLGNVRKGVLVS+G+G IT +AL SLE RGT
Sbjct: 516  VGYRSVFSSDTRGTGFMHRAFLTYAKFRGPLGNVRKGVLVSMGHGTITAYALVSLEPRGT 575

Query: 490  LFVTPGMETYDGMIVGEHSRDTDLDVNPVRMKELTNIRSVNKDENVKLTPPRLMTLEEAI 311
            LFVTPGMETYDGMIVGEHSRDTDLD+NPVR KELTNIR+ +KDENVKLTPPRLMTLEEAI
Sbjct: 576  LFVTPGMETYDGMIVGEHSRDTDLDINPVRAKELTNIRAASKDENVKLTPPRLMTLEEAI 635

Query: 310  GYVASDELIEVTPKAIRLRKKFLDASKRKNSRNKPKD 200
            GYVASDELIEVTPKAIRLRKK+LDA+KRK  RNKPKD
Sbjct: 636  GYVASDELIEVTPKAIRLRKKYLDANKRKMMRNKPKD 672


>ref|XP_004165675.1| PREDICTED: GTP-binding protein TypA/BipA homolog [Cucumis sativus]
          Length = 676

 Score =  556 bits (1432), Expect = e-156
 Identities = 279/337 (82%), Positives = 297/337 (88%)
 Frame = -2

Query: 1210 AGDIISMAGLASPSIGHTVANVEVMTALPTVELDPPTISMTFGVNDSPLAGRDGTHLTGG 1031
            AGDI+SMAGLA+PSIGHTVANVEV+ ALPT ELDPPTISMTFGVNDSPLAGRDGTHLTGG
Sbjct: 340  AGDIVSMAGLANPSIGHTVANVEVLAALPTFELDPPTISMTFGVNDSPLAGRDGTHLTGG 399

Query: 1030 KIGDRLIAEAETNLAINVLPALSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYK 851
            KIGDRL+AEAETNLAINVLP LSESYEVQGRGELQLGILIENMRREGFELS+SPPKVMYK
Sbjct: 400  KIGDRLMAEAETNLAINVLPGLSESYEVQGRGELQLGILIENMRREGFELSISPPKVMYK 459

Query: 850  TEKGXXXXXXXXXXXXXXXXXVGLVMEALSHRRAEVLDMGPVPGNFGRTRMSLTCPSRGL 671
            TE                   VGLVMEALSHRR EV +MGPVPGN GRTR+ LTCPSRGL
Sbjct: 460  TENSTKLEPIEEVTIEVNEEHVGLVMEALSHRRGEVTEMGPVPGNIGRTRLCLTCPSRGL 519

Query: 670  VGYRSVFSSDTRGTGFMHRAFLKYAKHRGPLGNVRKGVLVSVGYGPITGHALTSLEARGT 491
            VGYRSVFSSDTRGTGFMHRAFLKY KHRGPLGNVRKGVL+S+GYG +T HAL SLEARGT
Sbjct: 520  VGYRSVFSSDTRGTGFMHRAFLKYEKHRGPLGNVRKGVLISMGYGAVTAHALMSLEARGT 579

Query: 490  LFVTPGMETYDGMIVGEHSRDTDLDVNPVRMKELTNIRSVNKDENVKLTPPRLMTLEEAI 311
            LFV PGME YDGMI+GEHSRD+DLDVNPVR KELTNIRS  KDENVKL+PPRLM+LEEAI
Sbjct: 580  LFVNPGMEAYDGMIIGEHSRDSDLDVNPVRTKELTNIRSACKDENVKLSPPRLMSLEEAI 639

Query: 310  GYVASDELIEVTPKAIRLRKKFLDASKRKNSRNKPKD 200
            GYVASDELIEVTPKAIRLRKK+L+ +KRK    KPK+
Sbjct: 640  GYVASDELIEVTPKAIRLRKKYLEVNKRKTMSKKPKE 676


>ref|XP_002525152.1| GTP-binding protein typa/bipa, putative [Ricinus communis]
            gi|223535611|gb|EEF37279.1| GTP-binding protein
            typa/bipa, putative [Ricinus communis]
          Length = 661

 Score =  553 bits (1425), Expect = e-155
 Identities = 277/337 (82%), Positives = 299/337 (88%)
 Frame = -2

Query: 1210 AGDIISMAGLASPSIGHTVANVEVMTALPTVELDPPTISMTFGVNDSPLAGRDGTHLTGG 1031
            AGDI+S+AG+ SPSIGHT+ANVEVM ALPTVELDPPTISMTFGVNDSPLAGRDGTHLTGG
Sbjct: 325  AGDIVSVAGMTSPSIGHTIANVEVMNALPTVELDPPTISMTFGVNDSPLAGRDGTHLTGG 384

Query: 1030 KIGDRLIAEAETNLAINVLPALSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYK 851
            +IGDRL AEAETNLAINV+P L+ESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYK
Sbjct: 385  RIGDRLAAEAETNLAINVIPGLAESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYK 444

Query: 850  TEKGXXXXXXXXXXXXXXXXXVGLVMEALSHRRAEVLDMGPVPGNFGRTRMSLTCPSRGL 671
            T  G                 VGL+MEALSHRR EV+DMGPVPG+ GRTR+SLTCPSRGL
Sbjct: 445  TVNGEKLEPIEEVTIEVNEEHVGLIMEALSHRRGEVVDMGPVPGSVGRTRLSLTCPSRGL 504

Query: 670  VGYRSVFSSDTRGTGFMHRAFLKYAKHRGPLGNVRKGVLVSVGYGPITGHALTSLEARGT 491
            VGYRSVFSSDTRGTGFMHRAFL YAKHRG LGNVRKGVLVSVGYG IT HAL SLEARGT
Sbjct: 505  VGYRSVFSSDTRGTGFMHRAFLTYAKHRGSLGNVRKGVLVSVGYGAITAHALMSLEARGT 564

Query: 490  LFVTPGMETYDGMIVGEHSRDTDLDVNPVRMKELTNIRSVNKDENVKLTPPRLMTLEEAI 311
            LFVTPGMETYDGMIVGEHSRD+DLD+NPVR KELTN+R+ +KDENV+L+PPRLMTLEEAI
Sbjct: 565  LFVTPGMETYDGMIVGEHSRDSDLDINPVRSKELTNVRAASKDENVRLSPPRLMTLEEAI 624

Query: 310  GYVASDELIEVTPKAIRLRKKFLDASKRKNSRNKPKD 200
            GYVASDELIEVTPKAIRLRK+ LD +KRK    +PK+
Sbjct: 625  GYVASDELIEVTPKAIRLRKRHLDVNKRKAMSKRPKE 661


>ref|XP_002330669.1| predicted protein [Populus trichocarpa] gi|222872273|gb|EEF09404.1|
            predicted protein [Populus trichocarpa]
          Length = 428

 Score =  553 bits (1424), Expect = e-155
 Identities = 280/337 (83%), Positives = 300/337 (89%)
 Frame = -2

Query: 1210 AGDIISMAGLASPSIGHTVANVEVMTALPTVELDPPTISMTFGVNDSPLAGRDGTHLTGG 1031
            AGDIISMAG+ASP IGHTVANVEVMTALPTVELDPPTISMTFGVNDSPLAGRDGTHLTGG
Sbjct: 92   AGDIISMAGMASPVIGHTVANVEVMTALPTVELDPPTISMTFGVNDSPLAGRDGTHLTGG 151

Query: 1030 KIGDRLIAEAETNLAINVLPALSESYEVQGRGELQLGILIENMRREGFELSVSPPKVMYK 851
            KIGDRL+AEAETNLAINVLPA+ ESYEVQGRGELQLGILIENMRREGFELSVSPP+VMYK
Sbjct: 152  KIGDRLMAEAETNLAINVLPAIGESYEVQGRGELQLGILIENMRREGFELSVSPPRVMYK 211

Query: 850  TEKGXXXXXXXXXXXXXXXXXVGLVMEALSHRRAEVLDMGPVPGNFGRTRMSLTCPSRGL 671
            TE                   VGL+MEALSHRRAEVLDMGPVPG+ GRTR+SLTCPSRGL
Sbjct: 212  TENKEKLEPIEEVTIEINEEHVGLIMEALSHRRAEVLDMGPVPGHVGRTRLSLTCPSRGL 271

Query: 670  VGYRSVFSSDTRGTGFMHRAFLKYAKHRGPLGNVRKGVLVSVGYGPITGHALTSLEARGT 491
            VGYRSVFSSDTRGTGFMHRAFL YAKHRGPLGNVRKGVLVS+GYG IT +ALTSLE RG 
Sbjct: 272  VGYRSVFSSDTRGTGFMHRAFLTYAKHRGPLGNVRKGVLVSMGYGAITAYALTSLEPRGI 331

Query: 490  LFVTPGMETYDGMIVGEHSRDTDLDVNPVRMKELTNIRSVNKDENVKLTPPRLMTLEEAI 311
            LFV+PGMETYDGMIVGEHSRDTDLDVNPVR KEL+N+R+  KDENVKL+PPRLMTLEEAI
Sbjct: 332  LFVSPGMETYDGMIVGEHSRDTDLDVNPVRAKELSNMRAAGKDENVKLSPPRLMTLEEAI 391

Query: 310  GYVASDELIEVTPKAIRLRKKFLDASKRKNSRNKPKD 200
            GYVASDELIEVTPK IRLRK++L+ +KRK    + K+
Sbjct: 392  GYVASDELIEVTPKTIRLRKRYLEVNKRKTMSKRLKE 428


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