BLASTX nr result

ID: Cimicifuga21_contig00017905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017905
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318052.1| f-box family protein [Populus trichocarpa] g...   124   6e-27
ref|XP_004152476.1| PREDICTED: dof zinc finger protein DOF5.6-li...   124   8e-27
emb|CBI15034.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002279622.1| PREDICTED: dof zinc finger protein DOF5.6 [V...   124   1e-26
ref|XP_002321600.1| f-box family protein [Populus trichocarpa] g...   122   4e-26

>ref|XP_002318052.1| f-box family protein [Populus trichocarpa]
           gi|222858725|gb|EEE96272.1| f-box family protein
           [Populus trichocarpa]
          Length = 312

 Score =  124 bits (312), Expect = 6e-27
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = +3

Query: 135 MGFTSLQTCMDTSEWLQGTSNEEGRMESSPPLGDMITCSRPMSEKKLRPQHDQALKCPRC 314
           MG TSLQ CMD+S+WLQGT N+E  M+SS P GDM+TCSRP+ E++LRP HDQALKCPRC
Sbjct: 1   MGLTSLQVCMDSSDWLQGTINDESGMDSSSPSGDMLTCSRPLIERRLRPPHDQALKCPRC 60

Query: 315 DSTHTKFCYY 344
           DSTHTKFCYY
Sbjct: 61  DSTHTKFCYY 70


>ref|XP_004152476.1| PREDICTED: dof zinc finger protein DOF5.6-like [Cucumis sativus]
           gi|449487762|ref|XP_004157788.1| PREDICTED: dof zinc
           finger protein DOF5.6-like [Cucumis sativus]
          Length = 333

 Score =  124 bits (311), Expect = 8e-27
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = +3

Query: 135 MGFTSLQTCMDTSEWLQGTSNEEGRMESSPPLGDMITCSRPMSEKKLRPQHDQALKCPRC 314
           MG TSLQ CMD+S+WLQGT NEE  M+SS   GDM++CSRP++E++LRPQHDQALKCPRC
Sbjct: 1   MGLTSLQVCMDSSDWLQGTMNEESGMDSSSLSGDMLSCSRPLTERRLRPQHDQALKCPRC 60

Query: 315 DSTHTKFCYY 344
           DSTHTKFCYY
Sbjct: 61  DSTHTKFCYY 70


>emb|CBI15034.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  124 bits (310), Expect = 1e-26
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = +3

Query: 135 MGFTSLQTCMDTSEWLQGTSNEEGRMESSPPLGDMITCSRPMSEKKLRPQHDQALKCPRC 314
           MG T L  CMD+SEWLQGT++EE  M+SS P GDM+TCSRP+ E++LRPQHDQALKCPRC
Sbjct: 1   MGLTFLPVCMDSSEWLQGTAHEENGMDSSSPSGDMLTCSRPLIERRLRPQHDQALKCPRC 60

Query: 315 DSTHTKFCYY 344
           DSTHTKFCYY
Sbjct: 61  DSTHTKFCYY 70


>ref|XP_002279622.1| PREDICTED: dof zinc finger protein DOF5.6 [Vitis vinifera]
          Length = 308

 Score =  124 bits (310), Expect = 1e-26
 Identities = 53/70 (75%), Positives = 61/70 (87%)
 Frame = +3

Query: 135 MGFTSLQTCMDTSEWLQGTSNEEGRMESSPPLGDMITCSRPMSEKKLRPQHDQALKCPRC 314
           MG T L  CMD+SEWLQGT++EE  M+SS P GDM+TCSRP+ E++LRPQHDQALKCPRC
Sbjct: 1   MGLTFLPVCMDSSEWLQGTAHEENGMDSSSPSGDMLTCSRPLIERRLRPQHDQALKCPRC 60

Query: 315 DSTHTKFCYY 344
           DSTHTKFCYY
Sbjct: 61  DSTHTKFCYY 70


>ref|XP_002321600.1| f-box family protein [Populus trichocarpa]
           gi|222868596|gb|EEF05727.1| f-box family protein
           [Populus trichocarpa]
          Length = 314

 Score =  122 bits (305), Expect = 4e-26
 Identities = 52/70 (74%), Positives = 59/70 (84%)
 Frame = +3

Query: 135 MGFTSLQTCMDTSEWLQGTSNEEGRMESSPPLGDMITCSRPMSEKKLRPQHDQALKCPRC 314
           MG  SLQ CMD+S+WLQGT NEE  M+SS P GDM+TCSRP+ E++LRP HDQALKCPRC
Sbjct: 1   MGLNSLQVCMDSSDWLQGTINEESGMDSSSPSGDMLTCSRPLIERRLRPPHDQALKCPRC 60

Query: 315 DSTHTKFCYY 344
           DS HTKFCYY
Sbjct: 61  DSAHTKFCYY 70


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