BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00017894
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001071914.1| zinc finger protein [Ciona intestinalis] gi|...    73   5e-11
ref|NP_989108.1| pre-mRNA-splicing factor RBM22 [Xenopus (Silura...    73   7e-11
ref|XP_003200931.1| PREDICTED: pre-mRNA-splicing factor RBM22-li...    73   7e-11
gb|AAI53464.1| RNA binding motif protein 22 [Danio rerio]              73   7e-11
ref|NP_998379.1| pre-mRNA-splicing factor RBM22 [Danio rerio] gi...    73   7e-11

>ref|NP_001071914.1| zinc finger protein [Ciona intestinalis]
           gi|92081514|dbj|BAE93304.1| zinc finger protein [Ciona
           intestinalis]
          Length = 413

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 34/87 (39%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = +3

Query: 291 PNICRTCFGSNLCARLTRDMFKKDCKICKRPFRPVKWIYGIN-NVRRTEVCNSCSESGSV 467
           P +C+TC G N   R+T++ F K+CKIC RPF   +W  G     ++TEVC +CS+  ++
Sbjct: 21  PILCQTCLGDNPYIRMTKETFGKECKICDRPFTVFRWCPGARMRFKKTEVCQTCSKLKNI 80

Query: 468 CRVCGQACLEKEHDTAVPIRVREEAAA 548
           C+ C    L+ E+   +P++ R+EA A
Sbjct: 81  CQTC---LLDLEY--GLPVQTRDEALA 102


>ref|NP_989108.1| pre-mRNA-splicing factor RBM22 [Xenopus (Silurana) tropicalis]
           gi|82237531|sp|Q6P616.1|RBM22_XENTR RecName:
           Full=Pre-mRNA-splicing factor RBM22; AltName:
           Full=RNA-binding motif protein 22
           gi|38566013|gb|AAH62518.1| RNA binding motif protein 22
           [Xenopus (Silurana) tropicalis]
           gi|89267971|emb|CAJ81393.1| RNA binding motif protein 5
           [Xenopus (Silurana) tropicalis]
          Length = 417

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
 Frame = +3

Query: 291 PNICRTCFGSNLCARLTRDMFKKDCKICKRPFRPVKWIYGIN-NVRRTEVCNSCSESGSV 467
           P +C+TC G N   R+T++ + K+CKIC RPF   +W  G+    ++TEVC +CS+  +V
Sbjct: 21  PILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLKNV 80

Query: 468 CRVCGQACLEKEHDTAVPIRVREEAAA 548
           C+ C    L+ E+   +PI+VR+  A+
Sbjct: 81  CQTC---LLDLEY--GLPIQVRDAGAS 102


>ref|XP_003200931.1| PREDICTED: pre-mRNA-splicing factor RBM22-like, partial [Danio
           rerio]
          Length = 407

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
 Frame = +3

Query: 291 PNICRTCFGSNLCARLTRDMFKKDCKICKRPFRPVKWIYGIN-NVRRTEVCNSCSESGSV 467
           P +C+TC G N   R+T++ F K+CKIC RPF   +W  G+    ++TEVC +CS+  +V
Sbjct: 3   PILCQTCLGENPYIRMTKEKFGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKMKNV 62

Query: 468 CRVCGQACLEKEHDTAVPIRVRE 536
           C+ C    L+ E+   +PI+VR+
Sbjct: 63  CQTC---LLDLEY--GLPIQVRD 80


>gb|AAI53464.1| RNA binding motif protein 22 [Danio rerio]
          Length = 425

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
 Frame = +3

Query: 291 PNICRTCFGSNLCARLTRDMFKKDCKICKRPFRPVKWIYGIN-NVRRTEVCNSCSESGSV 467
           P +C+TC G N   R+T++ F K+CKIC RPF   +W  G+    ++TEVC +CS+  +V
Sbjct: 21  PILCQTCLGENPYIRMTKEKFGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKMKNV 80

Query: 468 CRVCGQACLEKEHDTAVPIRVRE 536
           C+ C    L+ E+   +PI+VR+
Sbjct: 81  CQTC---LLDLEY--GLPIQVRD 98


>ref|NP_998379.1| pre-mRNA-splicing factor RBM22 [Danio rerio]
           gi|326677871|ref|XP_003200934.1| PREDICTED:
           pre-mRNA-splicing factor RBM22-like [Danio rerio]
           gi|82237380|sp|Q6NZZ9.1|RBM22_DANRE RecName:
           Full=Pre-mRNA-splicing factor RBM22; AltName:
           Full=RNA-binding motif protein 22
           gi|41388933|gb|AAH65892.1| RNA binding motif protein 22
           [Danio rerio] gi|49619055|gb|AAT68112.1| FLJ10290-like
           [Danio rerio]
          Length = 425

 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
 Frame = +3

Query: 291 PNICRTCFGSNLCARLTRDMFKKDCKICKRPFRPVKWIYGIN-NVRRTEVCNSCSESGSV 467
           P +C+TC G N   R+T++ F K+CKIC RPF   +W  G+    ++TEVC +CS+  +V
Sbjct: 21  PILCQTCLGENPYIRMTKEKFGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKMKNV 80

Query: 468 CRVCGQACLEKEHDTAVPIRVRE 536
           C+ C    L+ E+   +PI+VR+
Sbjct: 81  CQTC---LLDLEY--GLPIQVRD 98